Present-day sympatry belies the evolutionary origin of a high-order polyploid

Critical factors in the establishment of allopolyploids

(2016) Norma L. Fowler et al.   AMERICAN JOURNAL OF BOTANY

Polyploidy: Pitfalls and paths to a paradigm

(2016) Douglas E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Insight into octoploid strawberry (Fragaria) subgenome composition revealed by GISH analysis of pentaploid hybrids

(2016) Bo Liu et al.   GENOME

Homomorphic ZW chromosomes in a wild strawberry show distinctive recombination heterogeneity but a small sex-determining region

(2016) Jacob A. Tennessen et al.   NEW PHYTOLOGIST

Patterns of abiotic niche shifts in allopolyploids relative to their progenitors

(2016) D. Blaine Marchant et al.   NEW PHYTOLOGIST

Postzygotic isolation varies by ploidy level within a polyploid complex

(2016) Brittany L. Sutherland et al.   NEW PHYTOLOGIST

HaploSNP affinities and linkage map positions illuminate subgenome composition in the octoploid, cultivated strawberry ( Fragaria×ananassa )

(2016) D.J. Sargent et al.   PLANT SCIENCE

Comparative Transcriptomics of Strawberries (Fragaria spp.) Provides Insights into Evolutionary Patterns

(2016) Qin Qiao et al.   Frontiers in Plant Science

Speciation by genome duplication: Repeated origins and genomic composition of the recently formed allopolyploid species Mimulus peregrinus

(2015) Mario Vallejo-Marín et al.   EVOLUTION

Multiple origins and chromosomal novelty in the allotetraploidTragopogon castellanus(Asteraceae)

(2015) Evgeny V. Mavrodiev et al.   NEW PHYTOLOGIST

On the relative abundance of autopolyploids and allopolyploids

(2015) Michael S. Barker et al.   NEW PHYTOLOGIST

Multilocus Sex Determination Revealed in Two Populations of Gynodioecious Wild Strawberry, Fragaria vesca subsp. bracteata

(2015) Tia-Lynn Ashman et al.   G3-Genes Genomes Genetics

Fragaria : A genus with deep historical roots and ripe for evolutionary and ecological insights

(2014) Aaron Liston et al.   AMERICAN JOURNAL OF BOTANY

Nonadditive Gene Expression in Polyploids

(2014) Mi-Jeong Yoo et al.   Annual Review of Genetics

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Bioclimatic evaluation of geographical range inFragaria(Rosaceae): consequences of variation in breeding system, ploidy and species age

(2014) Anna L. Johnson et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Evidence for shared broad-scale climatic niches of diploid and polyploid plants

(2014) K. L. Glennon et al.   ECOLOGY LETTERS

Evolutionary Origins and Dynamics of Octoploid Strawberry Subgenomes Revealed by Dense Targeted Capture Linkage Maps

(2014) Jacob A. Tennessen et al.   Genome Biology and Evolution

Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary

(2014) Kevin Vanneste et al.   GENOME RESEARCH

Are polyploids really evolutionary dead-ends (again)? A critical reappraisal of Mayroseet al. (2011)

(2014) Douglas E. Soltis et al.   NEW PHYTOLOGIST

De-novo RNA Sequencing and Metabolite Profiling to Identify Genes Involved in Anthocyanin Biosynthesis in Korean Black Raspberry (Rubus coreanus Miquel)

(2014) Tae Kyung Hyun et al.   PLoS One

Ancient hybridizations among the ancestral genomes of bread wheat

(2014) T. Marcussen et al.   SCIENCE

Bioclimatic, ecological, and phenotypic intermediacy and high genetic admixture in a natural hybrid of octoploid strawberries

(2013) Isabella Salamone et al.   AMERICAN JOURNAL OF BOTANY

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Dissection of the Octoploid Strawberry Genome by Deep Sequencing of the Genomes of Fragaria Species

(2013) H. Hirakawa et al.   DNA RESEARCH

Targeted Sequence Capture Provides Insight into Genome Structure and Genetics of Male Sterility in a Gynodioecious Diploid Strawberry, Fragaria vesca ssp. bracteata (Rosaceae)

(2013) Jacob A. Tennessen et al.   G3-Genes Genomes Genetics

RECONSTRUCTING THE COMPLEX EVOLUTIONARY ORIGIN OF WILD ALLOPOLYPLOID TOBACCOS (NICOTIANASECTIONSUAVEOLENTES)

(2012) Laura J. Kelly et al.   EVOLUTION

Sex-determining chromosomes and sexual dimorphism: insights from genetic mapping of sex expression in a natural hybrid Fragaria × ananassa subsp. cuneifolia

(2012) R Govindarajulu et al.   HEREDITY

Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing

(2012) Wambui Njuguna et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Extensive chromosomal variation in a recently formed natural allopolyploid species, Tragopogon miscellus (Asteraceae)

(2012) M. Chester et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Unified Model of Autopolyploid Establishment and Evolution

(2011) Benjamin P. Oswald et al.   AMERICAN NATURALIST

The more the better? The role of polyploidy in facilitating plant invasions

(2011) M. te Beest et al.   ANNALS OF BOTANY

Ancestral polyploidy in seed plants and angiosperms

(2011) Yuannian Jiao et al.   NATURE

Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus

(2011) Z. Xiong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inferring Species Networks from Gene Trees in High-Polyploid North American and Hawaiian Violets (Viola, Violaceae)

(2011) Thomas Marcussen et al.   SYSTEMATIC BIOLOGY

GENETIC ARCHITECTURE OF SEXUAL DIMORPHISM IN A SUBDIOECIOUS PLANT WITH A PROTO-SEX CHROMOSOME

(2010) Rachel B. Spigler et al.   EVOLUTION

Comparative Mapping Reveals Autosomal Origin of Sex Chromosome in Octoploid Fragaria virginiana

(2010) Rachel B. Spigler et al.   JOURNAL OF HEREDITY

The genome of woodland strawberry (Fragaria vesca)

(2010) Vladimir Shulaev et al.   NATURE GENETICS

Molecular mechanisms of polyploidy and hybrid vigor

(2010) Z. Jeffrey Chen   TRENDS IN PLANT SCIENCE

Decaploidy in Fragaria iturupensis (Rosaceae)

(2009) Kim E. Hummer et al.   AMERICAN JOURNAL OF BOTANY

The Role of Hybridization in Plant Speciation

(2009) Pamela S. Soltis et al.   Annual Review of Plant Biology

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Tracking the evolutionary history of polyploidy in Fragaria L. (strawberry): New insights from phylogenetic analyses of low-copy nuclear genes

(2009) M. Rousseau-Gueutin et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Two extinct diploid progenitors were involved in allopolyploid formation in the Hordeum murinum (Poaceae: Triticeae) taxon complex

(2009) Sabine S. Jakob et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Dating the origins of polyploidy events

(2009) Jeff J. Doyle et al.   NEW PHYTOLOGIST

Angiosperm genome comparisons reveal early polyploidy in the monocot lineage

(2009) H. Tang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The frequency of polyploid speciation in vascular plants

(2009) T. E. Wood et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Disentangling Reticulate Evolution in an Arctic–Alpine Polyploid Complex

(2009) Alessia Guggisberg et al.   SYSTEMATIC BIOLOGY

Genetic mapping of sex determination in a wild strawberry, Fragaria virginiana, reveals earliest form of sex chromosome

(2008) R B Spigler et al.   HEREDITY

Genomic Plasticity and the Diversity of Polyploid Plants

(2008) A. R. Leitch et al.   SCIENCE