Revegetation rewilds the soil bacterial microbiome of an old field

Pastures to woodlands: changes in soil microbial communities and carbon following reforestation

(2016) T.R. Cavagnaro et al.   APPLIED SOIL ECOLOGY

Compositional analysis: a valid approach to analyze microbiome high-throughput sequencing data

(2016) Gregory B. Gloor et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding

(2016) Alice Valentini et al.   MOLECULAR ECOLOGY

Ecological restoration success: a policy analysis understanding

(2016) Susan Baker et al.   RESTORATION ECOLOGY

A global meta-analysis on the ecological drivers of forest restoration success

(2016) Renato Crouzeilles et al.   Nature Communications

Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database

(2016) Andrew Bissett et al.   GigaScience

Identifying Centres of Plant Biodiversity in South Australia

(2016) Greg R. Guerin et al.   PLoS One

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

The ecology of environmental DNA and implications for conservation genetics

(2015) Matthew A. Barnes et al.   CONSERVATION GENETICS

Reintroduction of locally extinct vertebrates impacts arid soil fungal communities

(2015) Laurence J. Clarke et al.   MOLECULAR ECOLOGY

Vertical distribution of the soil microbiota along a successional gradient in a glacier forefield

(2015) Thomas Rime et al.   MOLECULAR ECOLOGY

Balancing the environmental benefits of reforestation in agricultural regions

(2015) S.C. Cunningham et al.   PERSPECTIVES IN PLANT ECOLOGY EVOLUTION AND SYSTEMATICS

Committing to ecological restoration

(2015) K. Suding et al.   SCIENCE

Soil bacterial diversity in degraded and restored lands of Northeast Brazil

(2014) Ademir Sérgio Ferreira Araújo et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Carbon sequestration is related to mycorrhizal fungal community shifts during long-term succession in boreal forests

(2014) Karina E. Clemmensen et al.   NEW PHYTOLOGIST

Taking the measure of change

(2014) B. Collen et al.   SCIENCE

Next generation restoration genetics: applications and opportunities

(2014) Anna V. Williams et al.   TRENDS IN PLANT SCIENCE

Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences

(2014) Jai Ram Rideout et al.   PeerJ

Considerations for Monitoring and Evaluating Forest Restoration

(2014) Philip J. Burton   Journal of Sustainable Forestry

Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding

(2013) Yinqiu Ji et al.   ECOLOGY LETTERS

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Evaluating Ecological Restoration Success: A Review of the Literature

(2013) Liana Wortley et al.   RESTORATION ECOLOGY

Hurdles and Opportunities for Landscape-Scale Restoration

(2013) M. H. M. Menz et al.   SCIENCE

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Little left to lose: deforestation and forest degradation in Australia since European colonization

(2012) C. J. A. Bradshaw   Journal of Plant Ecology

Towards next-generation biodiversity assessment using DNA metabarcoding

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Structural and Functional Loss in Restored Wetland Ecosystems

(2012) David Moreno-Mateos et al.   PLOS BIOLOGY

Soil Microbial Community Successional Patterns during Forest Ecosystem Restoration

(2011) Natasha C. Banning et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Effects of vegetation restoration on soil organic carbon sequestration at multiple scales in semi-arid Loess Plateau, China

(2011) Yafeng Wang et al.   CATENA

Soil carbon and litter development along a reconstructed biodiverse forest chronosequence of South-Western Australia

(2010) S. J. George et al.   BIOGEOCHEMISTRY

Global Biodiversity: Indicators of Recent Declines

(2010) S. H. M. Butchart et al.   SCIENCE

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

(2009) N. L. Ward et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil metaproteomics: a review of an emerging environmental science. Significance, methodology and perspectives

(2009) F. Bastida et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Changes in land use alter the structure of bacterial communities in Western Amazon soils

(2009) Ederson da C Jesus et al.   ISME Journal

Enhancement of Biodiversity and Ecosystem Services by Ecological Restoration: A Meta-Analysis

(2009) J. M. R. Benayas et al.   SCIENCE

Recovery of soil organic matter, organic matter turnover and nitrogen cycling in a post-mining forest rehabilitation chronosequence

(2008) N.C. Banning et al.   SOIL BIOLOGY & BIOCHEMISTRY