Vertical distribution of the soil microbiota along a successional gradient in a glacier forefield

Do bacterial and fungal communities assemble differently during primary succession?

(2014) S. K. Schmidt et al.   MOLECULAR ECOLOGY

Functional type 2 photosynthetic reaction centers found in the rare bacterial phylum Gemmatimonadetes

(2014) Y. Zeng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Community structure of soil phototrophs along environmental gradients in arid Himalaya

(2013) Kateřina Janatková et al.   ENVIRONMENTAL MICROBIOLOGY

Molecular characterization of phototrophic microorganisms in the forefield of a receding glacier in the Swiss Alps

(2013) Beat Frey et al.   Environmental Research Letters

Bacterial succession in Antarctic soils of two glacier forefields on Larsemann Hills, East Antarctica

(2013) Felizitas Bajerski et al.   FEMS MICROBIOLOGY ECOLOGY

Resistance and resilience of the forest soil microbiome to logging-associated compaction

(2013) Martin Hartmann et al.   ISME Journal

Gemmatirosa kalamazoonesis gen. nov., sp. nov., a member of the rarely-cultivated bacterial phylum Gemmatimonadetes

(2013) Jennifer M. DeBruyn et al.   JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY

Contrasting primary successional trajectories of fungi and bacteria in retreating glacier soils

(2013) Shawn P. Brown et al.   MOLECULAR ECOLOGY

Bacterial and fungal community responses to reciprocal soil transfer along a temperature and soil moisture gradient in a glacier forefield

(2013) Anita Zumsteg et al.   SOIL BIOLOGY & BIOCHEMISTRY

Structure and function of bacterial communities in ageing soils: Insights from the Mendocino ecological staircase

(2013) S. Uroz et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial cell-envelope fragments and the formation of soil organic matter: a case study from a glacier forefield

(2012) Christian Schurig et al.   BIOGEOCHEMISTRY

Evolution of carbon fluxes during initial soil formation along the forefield of Damma glacier, Switzerland

(2012) K. Guelland et al.   BIOGEOCHEMISTRY

Psychrophilic yeasts from worldwide glacial habitats: diversity, adaptation strategies and biotechnological potential

(2012) Pietro Buzzini et al.   FEMS MICROBIOLOGY ECOLOGY

Cellulose utilization in forest litter and soil: identification of bacterial and fungal decomposers

(2012) Martina Štursová et al.   FEMS MICROBIOLOGY ECOLOGY

Twenty years of research on fungal–plant interactions on Lyman Glacier forefront – lessons learned and questions yet unanswered

(2012) Ari Jumpponen et al.   Fungal Ecology

Fungal communities at the edge: Ecological lessons from high alpine fungi

(2012) S.K. Schmidt et al.   Fungal Ecology

Melt water driven stream and groundwater stage fluctuations on a glacier forefield (Dammagletscher, Switzerland)

(2012) Jan Magnusson et al.   HYDROLOGICAL PROCESSES

Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests

(2012) Martin Hartmann et al.   ISME Journal

Changes in Bacterial Community Structure of Agricultural Land Due to Long-Term Organic and Chemical Amendments

(2012) Vasvi Chaudhry et al.   MICROBIAL ECOLOGY

Soil bacterial and fungal communities along a soil chronosequence assessed by fatty acid profiling

(2012) Monika Welc et al.   SOIL BIOLOGY & BIOCHEMISTRY

Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil

(2012) Kathryn G. Eilers et al.   SOIL BIOLOGY & BIOCHEMISTRY

Heavy-Machinery Traffic Impacts Methane Emissions as Well as Methanogen Abundance and Community Structure in Oxic Forest Soils

(2011) Beat Frey et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Global Biogeography and Quantitative Seasonal Dynamics of Gemmatimonadetes in Soil

(2011) Jennifer M. DeBruyn et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial community and activity shifts after soil transplantation in a glacier forefield

(2011) Anita Zumsteg et al.   APPLIED GEOCHEMISTRY

Seasonal dynamics of nutrients and bacterial communities in unvegetated alpine glacier forefields

(2011) A. Lazzaro et al.   APPLIED SOIL ECOLOGY

Clustering 16S rRNA for OTU prediction: a method of unsupervised Bayesian clustering

(2011) Xiaolin Hao et al.   BIOINFORMATICS

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

Abundance and activity of nitrate reducers in an arable soil are more affected by temporal variation and soil depth than by elevated atmospheric [CO2]

(2011) Sven Marhan et al.   FEMS MICROBIOLOGY ECOLOGY

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

(2011) Petr Baldrian et al.   ISME Journal

Bacterial, Archaeal and Fungal Succession in the Forefield of a Receding Glacier

(2011) Anita Zumsteg et al.   MICROBIAL ECOLOGY

Changes in the root-associated fungal communities along a primary succession gradient analysed by 454 pyrosequencing

(2011) RAKEL BLAALID et al.   MOLECULAR ECOLOGY

Conservation of biotrophy in Hygrophoraceae inferred from combined stable isotope and phylogenetic analyses

(2011) Brian H. Seitzman et al.   MYCOLOGIA

Soil bacterial growth and nutrient limitation along a chronosequence from a glacier forefield

(2011) Hans Göransson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada

(2011) Beth F.T. Brockett et al.   SOIL BIOLOGY & BIOCHEMISTRY

Bacterial community structure and function change in association with colonizer plants during early primary succession in a glacier forefield

(2011) Joseph E. Knelman et al.   SOIL BIOLOGY & BIOCHEMISTRY

Chemical and Biological Gradients along the Damma Glacier Soil Chronosequence, Switzerland

(2011) Stefano M. Bernasconi et al.   VADOSE ZONE JOURNAL

Horizon-Specific Bacterial Community Composition of German Grassland Soils, as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes

(2010) C. Will et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology

(2010) R. Henrik Nilsson et al.   Fungal Ecology

V-Xtractor: An open-source, high-throughput software tool to identify and extract hypervariable regions of small subunit (16S/18S) ribosomal RNA gene sequences

(2010) Martin Hartmann et al.   JOURNAL OF MICROBIOLOGICAL METHODS

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Multivariate Cutoff Level Analysis (MultiCoLA) of large community data sets

(2010) Angélique Gobet et al.   NUCLEIC ACIDS RESEARCH

Improving indicator species analysis by combining groups of sites

(2010) Miquel De Cáceres et al.   OIKOS

A study of soil methane sink regulation in two grasslands exposed to drought and N fertilization

(2010) Adrian A. Hartmann et al.   PLANT AND SOIL

Vertical changes in bacterial and archaeal communities with soil depth in Japanese paddy fields

(2010) Takeshi WATANABE et al.   SOIL SCIENCE AND PLANT NUTRITION

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil CO2flux and photoautotrophic community composition in high-elevation, ‘barren’ soil

(2009) Kristen R. Freeman et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial succession in a glacier foreland of the High Arctic

(2009) Ursel M E Schütte et al.   ISME Journal

Accurate determination of microbial diversity from 454 pyrosequencing data

(2009) Christopher Quince et al.   NATURE METHODS

Changes in Bacterial and Archaeal Community Structure and Functional Diversity along a Geochemically Variable Soil Profile

(2008) C. M. Hansel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

fdrtool: a versatile R package for estimating local and tail area-based false discovery rates

(2008) K. Strimmer   BIOINFORMATICS

Plant host habitat and root exudates shape soil bacterial community structure

(2008) Feth el Zahar Haichar et al.   ISME Journal

Weathering, soil formation and initial ecosystem evolution on a glacier forefield: a case study from the Damma Glacier, Switzerland

(2008) S. M. Bernasconi et al.   MINERALOGICAL MAGAZINE

The earliest stages of ecosystem succession in high-elevation (5000 metres above sea level), recently deglaciated soils

(2008) S.K Schmidt et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

(2008) Christian L. Lauber et al.   SOIL BIOLOGY & BIOCHEMISTRY

Spatial variability of enzyme activities and microbial biomass in the upper layers of Quercus petraea forest soil

(2008) Jaroslav Šnajdr et al.   SOIL BIOLOGY & BIOCHEMISTRY