Organic farming increases richness of fungal taxa in the wheat phyllosphere

The fungal community changes over time in developing wheat heads

(2016) Morten Hertz et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

(2016) Matthew T. Agler et al.   PLOS BIOLOGY

Impact of Organic and Conventional Management on the Phyllosphere Microbial Ecology of an Apple Crop

(2016) ANDREA R. OTTESEN et al.   JOURNAL OF FOOD PROTECTION

Plant Host Species and Geographic Distance Affect the Structure of Aboveground Fungal Symbiont Communities, and Environmental Filtering Affects Belowground Communities in a Coastal Dune Ecosystem

(2015) Aaron S. David et al.   MICROBIAL ECOLOGY

Molecular operational taxonomic units as approximations of species in the light of evolutionary models and empirical data from Fungi

(2015) Martin Ryberg   MOLECULAR ECOLOGY

Host genotype is an important determinant of the cereal phyllosphere mycobiome

(2015) Rumakanta Sapkota et al.   NEW PHYTOLOGIST

Effect of pest management system on ‘Empire’ apple leaf phyllosphere populations

(2015) D.M. Glenn et al.   SCIENTIA HORTICULTURAE

Conducting a Microbiome Study

(2014) Julia K. Goodrich et al.   CELL

Improving ITS sequence data for identification of plant pathogenic fungi

(2014) R. Henrik Nilsson et al.   FUNGAL DIVERSITY

Fungal communities in wheat grain show significant co-existence patterns among species

(2014) M. Nicolaisen et al.   Fungal Ecology

Influence of the farming system on the epiphytic yeasts and yeast-like fungi colonizing grape berries during the ripening process

(2014) Guilherme Martins et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Distinct soil microbial diversity under long-term organic and conventional farming

(2014) Martin Hartmann et al.   ISME Journal

Fungicide Effects on Fungal Community Composition in the Wheat Phyllosphere

(2014) Ida Karlsson et al.   PLoS One

The foliar microbiome

(2014) Josep Peñuelas et al.   TRENDS IN PLANT SCIENCE

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

New insights into the structure and function of phyllosphere microbiota through high-throughput molecular approaches

(2013) Gurdeep Rastogi et al.   FEMS MICROBIOLOGY LETTERS

Land-use intensity and the effects of organic farming on biodiversity: a hierarchical meta-analysis

(2013) Sean L. Tuck et al.   JOURNAL OF APPLIED ECOLOGY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Bacterial Communities Associated with the Surfaces of Fresh Fruits and Vegetables

(2013) Jonathan W. Leff et al.   PLoS One

Local and neighbourhood effects of organic and conventional wheat management on aphids, weeds, and foliar diseases

(2012) Marie Gosme et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Conserving and promoting evenness: organic farming and fire-based wildland management as case studies

(2012) David W. Crowder et al.   ECOLOGY

New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities

(2012) Katarina Ihrmark et al.   FEMS MICROBIOLOGY ECOLOGY

Estimation of fungal biomass in forest litter and soil

(2012) Petr Baldrian et al.   Fungal Ecology

Characterization of microbial communities and fungal metabolites on field grown strawberries from organic and conventional production

(2012) Birgit Jensen et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Zymoseptoria ardabiliae and Z. pseudotritici, two progenitor species of the septoria tritici leaf blotch fungus Z. tritici (synonym: Mycosphaerella graminicola)

(2012) Eva H. Stukenbrock et al.   MYCOLOGIA

Microbial life in the phyllosphere

(2012) Julia A. Vorholt   NATURE REVIEWS MICROBIOLOGY

mvabund- anRpackage for model-based analysis of multivariate abundance data

(2012) Yi Wang et al.   Methods in Ecology and Evolution

A Coevolutionary Framework for Managing Disease-Suppressive Soils

(2011) Linda L. Kinkel et al.   Annual Review of Phytopathology

Functional and Structural Microbial Diversity in Organic and Conventional Viticulture: Organic Farming Benefits Natural Biocontrol Agents

(2011) Florian Schmid et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Zymoseptoria gen. nov.: a new genus to accommodate Septoria-like species occurring on graminicolous hosts

(2011) W. Quaedvlieg et al.   PERSOONIA

Does conservation on farmland contribute to halting the biodiversity decline?

(2011) David Kleijn et al.   TRENDS IN ECOLOGY & EVOLUTION

Distance-based multivariate analyses confound location and dispersion effects

(2011) David I. Warton et al.   Methods in Ecology and Evolution

Managing the ecology of foliar pathogens: ecological tolerance in crops

(2010) A.C. Newton et al.   ANNALS OF APPLIED BIOLOGY

LessFusariuminfestation and mycotoxin contamination in organic than in conventional cereals

(2010) A. Bernhoft et al.   Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Risk Assessment

The need to breed crop varieties suitable for organic farming, using wheat, tomato and broccoli as examples: A review

(2010) E.T. Lammerts van Bueren et al.   NJAS-WAGENINGEN JOURNAL OF LIFE SCIENCES

First report of Penidiella strumelloidea as a pathogen of greenhouse cucumbers in Iran

(2010) S. Nosrati et al.   PHYTOPARASITICA

Spatiotemporal variation in the fungal community associated with wheat leaves showing symptoms similar to stagonospora nodorum blotch

(2009) Eva Blixt et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Fusariummycotoxin content of UK organic and conventional wheat

(2009) S.G. Edwards   Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Risk Assessment

Initial community evenness favours functionality under selective stress

(2009) Lieven Wittebolle et al.   NATURE

Population genomics of domestic and wild yeasts

(2009) Gianni Liti et al.   NATURE

Real-time PCR for quantification of eleven individual Fusarium species in cereals

(2008) Mogens Nicolaisen et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Culturable Fungi of Stored ‘Golden Delicious’ Apple Fruits: A One-Season Comparison Study of Organic and Integrated Production Systems in Switzerland

(2008) José Granado et al.   MICROBIAL ECOLOGY