Article
Biotechnology & Applied Microbiology
Zhi-Wen Qiao, Da-Ru Wang, Xun Wang, Chun-Xiang You, Xiao-Fei Wang
Summary: This study identified 30 cyclophilin genes in the 'Golden Delicious' apple genome and categorized them into three clades. The analysis also revealed the involvement of MdCYP16 as a nuclear-localized MD cyclophilin in response to salt and drought stress in apple. The research provides valuable insights into the apple cyclophilin gene family and offers candidate genes for stress response in apple.
Article
Agronomy
Connor Lane, Yosef Al Shoffe, Jenny Kao-Kniffin, Christopher B. Watkins
Summary: The study investigated the effects of a plant growth regulator and low O2 controlled atmosphere storage on the surface microbiome of 'Gala' apples. It was found that the storage conditions influenced the composition, diversity, and function of the microbiomes inhabiting fruit surfaces. The results provide a greater understanding of biocontrol and pathogen population dynamics.
POSTHARVEST BIOLOGY AND TECHNOLOGY
(2023)
Article
Horticulture
S. Crespo-Martinez, O. Oneka, M. J. Laquidain, J. Urrestarazu, L. G. Santesteban, C. Miranda
Summary: This study investigated the reproductive biology of traditional apple cultivars in the Basque-style cider-producing area in northern Spain. The results showed that some varieties have good pollen quality, while others are not suitable for self-pollination. Furthermore, the study identified rare S26 and novel S60 alleles in the region. These findings will contribute to improving orchard management and increasing potential yields.
SCIENTIA HORTICULTURAE
(2023)
Article
Horticulture
Anze Svara, Kristina Ilnikar, Sebastien Carpentier, Nico De Storme, Barbara De Coninck, Wannes Keulemans
Summary: Apple production is significantly affected by apple scab disease caused by the fungus Venturia inaequalis. Breeding for polyploid cultivars could enhance resistance of apple cultivars against different V. inaequalis isolates. The role of polyploidy in conferring resistance to biotic challenges is plant-pathogen-specific.
SCIENTIA HORTICULTURAE
(2021)
Review
Forestry
Gai-Xing Ning, Wen-Fang Li, Ming-Yu Chu, Zong-Huan Ma, Ping Wang, Juan Mao, Bai-Hong Chen
Summary: MdbHLH51 plays a crucial role in the coloration and accumulation of anthocyanins in apple fruits, promoting the red coloring of fruit skin through enhancing the accumulation of anthocyanins. Additionally, MdbHLH51 can also increase the anthocyanin content in other plants.
TREES-STRUCTURE AND FUNCTION
(2022)
Article
Plant Sciences
Yiru Si, Bishnu P. Khanal, Oliver K. Schlueter, Moritz Knoche
Summary: The pattern of cuticle deposition is crucial in managing strain buildup in fruit cuticles. Recent evidence suggests a strain gradient within apple fruit cuticle, with outer layers being more strained and prone to microcracking. The deposition of cutin primarily occurs on the inner surface of the cuticle, resulting in a radial gradient in cuticular age.
FRONTIERS IN PLANT SCIENCE
(2021)
Article
Food Science & Technology
Caiping Huang, Bangzhu Peng
Summary: A high-performance nitrogen-doped chitosan-TiO2 nanocomposite was successfully prepared by a simple precipitation method and showed significant photocatalytic activities for the degradation of patulin in apple juice. The nanocomposite effectively degraded patulin within 35 minutes under ultraviolet irradiation, with little impact on the quality of apple juice.
LWT-FOOD SCIENCE AND TECHNOLOGY
(2021)
Article
Horticulture
Yiru Si, Bishnu P. Khanal, Moritz Knoche
Summary: Microscopic cracks are causative in fruit skin disorders of apple, while deposition of cuticle can reduce these cracks. Feeding C-13-labeled oleic acid to developing apple fruit surface results in rapid incorporation, with some cultivars showing higher incorporation. The rate of incorporation decreases over time during fruit development.
SCIENTIA HORTICULTURAE
(2021)
Article
Forestry
Daniel A. Edge-Garza, Miguel Villamil-Castro, Dorrie Main, Craig Hardner
Summary: This communication addresses the issue of discrepant ssID information for 78 SNPs on the 8K IRSC apple SNP array and reports the correct NCBI ssIDs for these SNPs in order to accurately aggregate historical SNP data and prevent the perpetuation of misassigned sslDs in further publications.
TREE GENETICS & GENOMES
(2021)
Article
Plant Sciences
Simon Miranda, Stefano Piazza, Floriana Nuzzo, Mingai Li, Jorge Lagreze, Axel Mithoefer, Alessandro Cestaro, Danuse Tarkowska, Richard Espley, Andrew Dare, Mickael Malnoy, Stefan Martens
Summary: The effects of targeting the key gene MdPGT1 involved in phloridzin biosynthesis in apple using conventional transgenesis and CRISPR/Cas9-mediated genome editing were simultaneously assessed. Knockdown lines showed impaired growth and leaf morphology, while genome-edited lines exhibited normal growth despite reduced phloridzin levels. Transcriptomic and metabolic analyses revealed regulated genes involved in phenylpropanoid and flavonoid pathways. Phytohormone profiling demonstrated differential modulation, with increased salicylic and jasmonic acid levels in dwarf lines and no correlation between auxin and ABA with growth phenotype.
Article
Plant Sciences
Aurita Butkeviciute, Jonas Viskelis, Mindaugas Liaudanskas, Pranas Viskelis, Valdimaras Janulis
Summary: The study found variations in antioxidant activity and composition of phenolic compounds in different apple cultivars stored under different controlled atmosphere conditions, highlighting the importance of determining optimal storage conditions for providing consumers with high-quality apples.
Article
Plant Sciences
Claudia Moggia, Manuel A. Bravo, Ricardo Baettig, Marcelo Valdes, Sebastian Romero-Bravo, Mauricio Zuniga, Jorge Cornejo, Fabio Gosetti, Davide Ballabio, Ricardo A. Cabeza, Randolph Beaudry, Gustavo A. Lobos
Summary: Bitter pit is a relevant post-harvest disorder for the apple industry, usually related to calcium deficiency. XRF technology can be used to predict the incidence of bitter pit by analyzing the signal intensity of various mineral elements in the fruit. The study found that, in addition to potassium and calcium, other elements also play a key role in bitter pit prediction.
FRONTIERS IN PLANT SCIENCE
(2022)
Article
Plant Sciences
Mengmeng Wu, Zhengrong Luo, Shangyin Cao
Summary: MdPG1 encoding polygalacturonase is a key gene related to fruit firmness and texture variations in apple. We identified a SNPA/C variant in the promoter region of MdPG1 and found that the promoter with SNPA could be strongly bound and activated by MdCBF2, while the promoter with SNPC could not. We also discovered a novel long non-coding RNA, lncRNA(PG1), in the promoter of MdPG1, which was a causative variant. Our study provides new insights into the genetic regulation of MdPG1 allele expression and has implications for apple breeding.
Article
Plant Sciences
Anna Wallis, Isabella M. Yannuzzi, Mei-Wah Choi, John Spafford, Matthew Fenn, Padmini Ramachandran, Ruth Timme, James B. Pettengill, Robin Cagle, Andrea Ottesen, Kerik D. Cox
Summary: The study investigated the distribution of streptomycin-resistant Erwinia amylovora strains in major apple production regions of New York over the past 6 years, revealing a few cosmopolitan strains and novel CRISPR profile diversity across regions. Streptomycin-resistant E. amylovora was detected in a small area and associated with specific CRISPR profile, suggesting the original strain was not fully eradicated and went undetected due to low disease pressure.
Article
Horticulture
Hiroshi Iwanami, Yuki Moriya-Tanaka, Toshio Hanada, Takashi Baba, Daisuke Sakamoto
Summary: Sweetness is a crucial factor for consumer preference in apples, however, there is no established method for producing apples high in soluble solids content (SSC). Through a regression model, we found that solar radiation and crop load significantly affect the SSC of fruit. Additionally, there is a strong correlation between starch content and SSC at harvest. Therefore, restricting the number of fruits per tree during growth can increase the SSC in apples.
SCIENTIA HORTICULTURAE
(2023)
Article
Microbiology
Olivia Guass, Lisa Meier Haapanen, Scot E. Dowd, Ana Sirovic, Richard William McLaughlin
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
(2016)
Article
Public, Environmental & Occupational Health
Spyros A. Kalams, Lisa M. Rogers, Rita M. Smith, Louise Barnett, Katie Crumbo, Shonda Sumner, Naomi Prashad, Kyle Rybczyk, Ginger Milne, Scot E. Dowd, Erica Chong, Beverly Winikoff, David M. Aronoff
EUROPEAN JOURNAL OF CONTRACEPTION AND REPRODUCTIVE HEALTH CARE
(2016)
Article
Ecology
Jose F. Garcia-Mazcorro, Stephany A. Castillo-Carranza, Blake Guard, Jose P. Gomez-Vazquez, Scot E. Dowd, Donald J. Brigthsmith
Article
Microbiology
Rodrick J. Chiodini, Scot E. Dowd, Susan Galandiuk, Brian Davis, Angela Glassing
Article
Infectious Diseases
Felix D. Guerrero, Anastasia Kellogg, Alexandria N. Ogrey, Andrew M. Heekin, Roberto Barrero, Matthew I. Bellgard, Scot E. Dowd, Ming-Ying Leung
TICKS AND TICK-BORNE DISEASES
(2016)
Article
Gastroenterology & Hepatology
Angela Glassing, Scot E. Dowd, Susan Galandiuk, Brian Davis, Rodrick J. Chiodini
Article
Microbiology
Richard W. McLaughlin, Patricia Lynn Shewmaker, Anne M. Whitney, Ben W. Humrighouse, Ana C. Lauer, Vladimir N. Loparev, Christopher A. Gulvik, P. A. Cochran, Scot E. Dowd
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2017)
Article
Parasitology
Saban Tekin, Scot E. Dowd, Marko Davinic, Ahmet Bursali, Adem Keskin
PARASITOLOGY RESEARCH
(2017)
Article
Infectious Diseases
Shahid Karim, Khemraj Budachetri, Nabanita Mukherjee, Jaclyn Williams, Asma Kausar, Muhammad Jawadul Hassan, Steven Adamson, Scot E. Dowd, Dmitry Apanskevich, Abdullah Arijo, Zia Uddin Sindhu, Muhammad Azam Kakar, Raja Muhammad Dilpazir Khan, Shafiq Ullah, Muhammad Sohail Sajid, Abid Ali, Zafar Iqbal
PLOS NEGLECTED TROPICAL DISEASES
(2017)
Article
Allergy
Jan Hubert, Marta Nesvorna, Pavel Klimov, Scot E. Dowd, Bruno Sopko, Tomas Erban
Article
Microbiology
Jan Hubert, Marta Nesvorna, Pavel B. Klimov, Tomas Erban, Bruno Sopko, Scot E. Dowd, Erin D. Scully
Summary: Through correlations between host and symbiont gene expression profiles, important molecular pathways potentially regulating or facilitating their interactions were identified. Cardinium gene expression explained 95% of the variation in mite gene expression, while mite gene expression explained 76% of Cardinium gene expression variability. Cardinium affects mite metabolic pathways and is correlated with genes associated with terpenoid biosynthesis.
Article
Gastroenterology & Hepatology
Toufic A. Kabbani, Kumar Pallav, Scot E. Dowd, Javier Villafuerte-Galvez, Rohini R. Vanga, Natalia E. Castillo, Joshua Hansen, Melinda Dennis, Daniel A. Leffler, Ciaran P. Kelly
Article
Immunology
Tamar L. Gur, Lena Shay, Aditi Vadodkar Palkar, Sydney Fisher, Vanessa A. Varaljay, Scot Dowd, Michael T. Bailey
BRAIN BEHAVIOR AND IMMUNITY
(2017)
Article
Microbiology
Shukria Akbar, Scot E. Dowd, D. Cole Stevens
GENOME ANNOUNCEMENTS
(2017)
Article
Microbiology
Barbara I. Adaikpoh, Scot E. Dowd, D. Cole Stevens
GENOME ANNOUNCEMENTS
(2017)
Article
Horticulture
Peng Jia, Rui Yan, Yuan Wang, Feng-huan Gao, Yang Liu, Qing-long Dong, Hao-an Luan, Xue-mei Zhang, Han Li, Su-ping Guo, Guo-hui Qi
Summary: The KNOX gene plays crucial roles in plant development, and this study identified 19 KNOX gene members in kiwifruit. One of the genes, AcKNOX11, is selectively expressed in flower buds and shoots, and its expression can be induced by ABA and melatonin. Functional analysis revealed that AcKNOX11 delays flowering, reduces plant height, alters leaf shape, and inhibits seed germination through ABA-melatonin interaction.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Dan Hua, Wen-Shu Chen, Rong-Yu Rao, Xu-Feng Chen, Huan-Huan Chen, Ning-Wei Lai, Lin-Tong Yang, Xin Ye, Li -Song Chen
Summary: This study revealed that nitrogen deficiency can lead to increased production of reactive oxygen species (ROS) and methylglyoxal (MG), but also enhances the ability of leaves and roots to detoxify these molecules. The effects of nitrogen deficiency on ROS and MG generation and their detoxification systems were found to be different in leaves and roots, with roots being more affected.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Shenghan Yang, Chonlong Chio, Wensheng Qin, Yanxi Pei, Guangpeng Pei, Yuen Zhu, Hua Li
Summary: This study evaluates the immobilization and deactivation of pathogen-produced enzymes and toxic metabolites by biochar in tomato Fusarium wilt and finds that biochar can effectively prevent disease occurrence.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Deborah Pagliaccia, Michelle Ortiz, Michael Rodriguez, Sophia Abbott, Agustina De Francesco, Madison Amador, Valeria Lavagi, Benjamin Maki, Francesca Hopkins, Jonathan Kaplan, Samantha Ying, Georgios Vidalakis
Summary: This study investigates the effectiveness of organic soil amendments (bokashi, biochar, and their combination) in promoting soil health, nutrient availability, and plant growth. The results show that these amendments can significantly alter soil parameters and have positive effects on soil and plant health.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Yu-Jeong Kwon, Min Jeong Hong, Minkyu Park, Dawon Jeon, Gah-Hyun Lim, Sungyul Chang, Dong-Hwan Kim, Jin-Baek Kim, Jundae Lee, Yeong Deuk Jo
Summary: Flowing LOCUS T (FT)-like genes play crucial roles in flowering induction in plants. Pepper FT-like genes are mostly expressed in leaves and interact with FLOWERING LOCUS D, promoting or delaying flowering. The unique evolutionary process of pepper FT-like genes provides insights for improving productivity.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Ziwen Su, Juan Yan, Binbin Zhang, Meng Sun, Zhixiang Cai, Zhijun Shen, Ruijuan Ma, Mingliang Yu
Summary: Bagging is a crucial cultivation measure that affects the quality of peach fruit by regulating exposure to light. This study investigated the effects of bagging on the content of phenolic compounds in peach fruit and identified the most sensitive compounds to bagging treatment. The study also explored the regulatory role of bagging on phenolic synthetic-related genes. The results showed that bagging affected the accumulation of different phenolics in different peach cultivars and light intensity played a significant role in the accumulation of anthocyanins and other phenolic substances in peach fruit. Additionally, the expression of structural genes and transcription factors related to phenolic synthesis was regulated by bagging and light conditions. These findings provide a foundation for understanding the regulation mechanism of light on the synthesis of phenolic compounds in peach fruit.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Yanfang Zhang, Xinzhi Cui, Zhilei Du, Xiulian Li, Bangdi Liu, Meng Liu, Xiangquan Zeng, Fengjun Guo, Xinguang Fan, Shuyang Sun
Summary: In this study, melatonin treatment effectively improved the aroma quality of apricots during low temperature storage by maintaining firmness and soluble solids content, inhibiting ethylene production, and regulating enzyme activities related to aroma synthesis.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Sang-Mo Kang, Shifa Shaffique, Md. Injamum-Ul-Hoque, Sarah Owdah Alomrani, Yong-Sung Park, In-Jung Lee
Summary: Salinity is a global environmental problem that affects the physiology and morphology of plants. Melatonin has been found to improve photosynthesis, antioxidant activities, and seedling characteristics in milk thistle plants exposed to salinity stress, thereby enhancing their salt tolerance.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Nadia Borgini, Haifa Benmoussa, Mohamed Ghrab, Mehdi Ben Mimoun
Summary: This study investigates the agroclimatic requirements of Prunus species cultivars growing in warm areas using Partial Least Squares regression. The findings reveal that the chilling and heat requirements of the cultivars appear discontinuous, with overlaps or transition periods between the two phases. The warm mean temperatures occurring during the chilling period are the main determinant of the flowering of the studied cultivars.
SCIENTIA HORTICULTURAE
(2024)
Review
Horticulture
Kayise Hypercia Maseko, Thierry Regnier, Belinda Meiring, Obiro Cuthbert Wokadala, Tonna Ashim Anyasi
Summary: Bananas are a significant tropical fruit with diverse cultivars, providing essential minerals, vitamins, and phytochemicals. The Cavendish group is preferred, but identifying suitable cultivars and maturity stages is crucial for various applications.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Godfrey Ouma, Joshua Wanyama, Isa Kabenge, Joseph Jjagwe, Mukulu Diana, John Muyonga
Summary: Irrigation plays a crucial role in increasing eggplant yields amidst climate change, but the deficit irrigation level for optimal growth remains uncertain. This study examined the effect of deficit drip irrigation on eggplant performance and found that irrigating at 75% field capacity maximizes yield and water saving in sandy clay loam soil.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Andrea Marcone, Giorgio Impollonia, Michele Croci, Henri Blandinieres, Stefano Amaducci
Summary: This study used Sentinel-2 satellite images to estimate biophysical and biochemical parameters of spinach crops and found that canopy-level parameters were estimated more accurately. The estimation of the canopy-scale parameter AGB using MCARI showed the highest accuracy, while the estimation of the leaf-scale parameter LCC using NDWI showed the lowest accuracy. At the field scale, the validation results for AGB estimation using SR were the best.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Chengsheng Gong, Guangjun Guo, Baogui Pan, Changzhou Gao, Xianwei Zhu, Shubin Wang, Jinbing Liu, Weiping Diao
Summary: This study investigated the role of key cytokines and metabolic factors in the formation of plant-type traits in pepper. Through integrated analysis of RNA-seq and metabolite determination, the study identified the low content of gibberellin and high content of auxin as important factors causing plant dwarfing, and jasmonic acid as a metabolic factor affecting branch traits. A total of 131 candidate genes involved in metabolite synthesis and the formation of plant-type traits were identified.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Yue Ma, Jia-Chen Hu, Yang Yu, Xin Cheng, Yan-Li Du, Qiang Zhao, Ji-Dao Du
Summary: Cadmium and drought stress significantly inhibited the growth of adzuki bean seedling plants, with the combined stress showing the highest degree of inhibition. Cd+D treatment reduced Cd accumulation in adzuki bean seedling roots. The treatment altered antioxidant enzyme activities and cell cycle phases in the roots, leading to changes in reactive oxygen species content.
SCIENTIA HORTICULTURAE
(2024)
Article
Horticulture
Lucette Adet, Danae M. A. Rozendaal, Arthur Tapi, Pieter A. Zuidema, Philippe Vaast, Niels P. R. Anten
Summary: This study investigated the effects of water stress on cocoa trees and found that they are highly sensitive to water stress, with different genotypes exhibiting varied responses. Potassium application did not mitigate the negative effects of water stress. There was significant variation among genotypes in terms of leaf and crown traits, and positive interactions between genotype and irrigation were observed. These findings provide insights into the acclimation strategies of cocoa trees and can be useful for selecting drought-tolerant genotypes.
SCIENTIA HORTICULTURAE
(2024)