A Guide to the Natural History of Freshwater Lake Bacteria

Lakes as sentinels of climate change

(2011) Rita Adrian et al.   LIMNOLOGY AND OCEANOGRAPHY

Bacterial diversity and morphology in deep ultraoligotrophic Andean lakes: The role of UVR on vertical distribution

(2011) Gianluca Corno et al.   LIMNOLOGY AND OCEANOGRAPHY

Spatiotemporal distribution and activity patterns of bacteria from three phylogenetic groups in an oligomesotrophic lake

(2011) Michaela M. Salcher et al.   LIMNOLOGY AND OCEANOGRAPHY

A global network of coexisting microbes from environmental and whole-genome sequence data

(2010) S. Chaffron et al.   GENOME RESEARCH

Polynucleobacter rarus sp. nov., a free-living planktonic bacterium isolated from an acidic lake

(2010) M. W. Hahn et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Polynucleobacter acidiphobus sp. nov., a representative of an abundant group of planktonic freshwater bacteria

(2010) M. W. Hahn et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The ecological coherence of high bacterial taxonomic ranks

(2010) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Development of a 16S rRNA-targeted probe set for Verrucomicrobia and its application for fluorescence in situ hybridization in a humic lake

(2010) Julia Arnds et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Involvement of Cell Surface Structures in Size-Independent Grazing Resistance of Freshwater Actinobacteria

(2009) M. Tarao et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular Biological Detection and Quantification of Novel Fibrobacter Populations in Freshwater Lakes

(2009) J. E. McDonald et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Broad Habitat Range of the Phylogenetically Narrow R-BT065 Cluster, Representing a Core Group of the Betaproteobacterial Genus Limnohabitans

(2009) K. Simek et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Prokaryotic Genomes and Diversity in Surface Ocean Waters: Interrogating the Global Ocean Sampling Metagenome

(2009) E. J. Biers et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cryptic Lineages of the Genus Escherichia

(2009) S. T. Walk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Vertical diversity of bacteria in an oxygen-stratified humic lake, evaluated using DNA and phospholipid analyses

(2009) S Taipale et al.   AQUATIC MICROBIAL ECOLOGY

Changes in the bacterioplankton community of oligotrophic Lake Stechlin (northeastern Germany) after humic matter addition

(2009) KML Hutalle-Schmelzer et al.   AQUATIC MICROBIAL ECOLOGY

Global phylogenetic community structure and β-diversity patterns in surface bacterioplankton metacommunities

(2009) A Barberán et al.   AQUATIC MICROBIAL ECOLOGY

Dynamics of the SAR11 bacterioplankton lineage in relation to environmental conditions in the oligotrophic North Pacific subtropical gyre

(2009) Alexander Eiler et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre

(2009) Rachel S. Poretsky et al.   ENVIRONMENTAL MICROBIOLOGY

Comparison of the structure and composition of bacterial communities from temperate and tropical freshwater ecosystems

(2009) Jean-F. Humbert et al.   ENVIRONMENTAL MICROBIOLOGY

Substrate incorporation patterns of bacterioplankton populations in stratified and mixed waters of a humic lake

(2009) Ulrike Buck et al.   ENVIRONMENTAL MICROBIOLOGY

Evidence for structuring of bacterial community composition by organic carbon source in temperate lakes

(2009) Stuart E. Jones et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative analyses of actinobacterial genomic fragments from Lake Kinneret

(2009) Alon Philosof et al.   ENVIRONMENTAL MICROBIOLOGY

A small population of planktonicFlavobacteriawith disproportionally high growth during the spring phytoplankton bloom in a prealpine lake

(2009) Michael Zeder et al.   ENVIRONMENTAL MICROBIOLOGY

Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget - France)

(2009) Didier Debroas et al.   ENVIRONMENTAL MICROBIOLOGY

Contrasting ability to take up leucine and thymidine among freshwater bacterial groups: implications for bacterial production measurements

(2009) María Teresa Pérez et al.   ENVIRONMENTAL MICROBIOLOGY

Ubiquity ofPolynucleobacter necessariusssp.asymbioticusin lentic freshwater habitats of a heterogenous 2000 km2area

(2009) Jitka Jezberová et al.   ENVIRONMENTAL MICROBIOLOGY

Temporal and spatial variability in nearshore bacterioplankton communities of Lake Michigan

(2009) Sabrina R. Mueller-Spitz et al.   FEMS MICROBIOLOGY ECOLOGY

Enrichment and cultivation of pelagic bacteria from a humic lake using phenol and humic matter additions

(2009) Kristine Michelle L. Hutalle-Schmelzer et al.   FEMS MICROBIOLOGY ECOLOGY

Bacterial Diversity of Freshwater Alpine Lake Puma Yumco on the Tibetan Plateau

(2009) Yongqin Liu et al.   GEOMICROBIOLOGY JOURNAL

Description of seven candidate species affiliated with the phylum Actinobacteria, representing planktonic freshwater bacteria

(2009) M. W. Hahn   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

'Candidatus Planktophila limnetica', an actinobacterium representing one of the most numerically important taxa in freshwater bacterioplankton

(2009) J. Jezbera et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Emended description of the genus Polynucleobacter and the species Polynucleobacter necessarius and proposal of two subspecies, P. necessarius subsp. necessarius subsp. nov. and P. necessarius subsp. asymbioticus subsp. nov.

(2009) M. W. Hahn et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Polynucleobacter cosmopolitanus sp. nov., free-living planktonic bacteria inhabiting freshwater lakes and rivers

(2009) M. W. Hahn et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Limnohabitans curvus gen. nov., sp. nov., a planktonic bacterium isolated from a freshwater lake

(2009) M. W. Hahn et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities

(2009) Anders F Andersson et al.   ISME Journal

Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria

(2009) Adrian K Sharma et al.   ISME Journal

Characterization of Bacterial Communities Associated with Organic Aggregates in a Large, Shallow, Eutrophic Freshwater Lake (Lake Taihu, China)

(2009) Xiangming Tang et al.   MICROBIAL ECOLOGY

Infrequent Transitions between Saline and Fresh Waters in One of the Most Abundant Microbial Lineages (SAR11)

(2009) R. Logares et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bacterial competition: surviving and thriving in the microbial jungle

(2009) Michael E. Hibbing et al.   NATURE REVIEWS MICROBIOLOGY

Comparative analysis of bacterioplankton assemblages from maritime Antarctic freshwater lakes with contrasting trophic status

(2009) M. Romina Schiaffino et al.   POLAR BIOLOGY

Infrequent marine–freshwater transitions in the microbial world

(2009) Ramiro Logares et al.   TRENDS IN MICROBIOLOGY

Bacterial Community Structure of Acid-Impacted Lakes: What Controls Diversity?

(2008) S. F. Percent et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Spatio-temporal patterns of bacterioplankton production and community composition related to phytoplankton composition and protistan bacterivory in a dam reservoir

(2008) K Simek et al.   AQUATIC MICROBIAL ECOLOGY

Top-down and bottom-up induced shifts in bacterial abundance, production and community composition in an experimentally divided humic lake

(2008) Hans-Peter Grossart et al.   ENVIRONMENTAL MICROBIOLOGY

Actinorhodopsins: proteorhodopsin-like gene sequences found predominantly in non-marine environments

(2008) Adrian K. Sharma et al.   ENVIRONMENTAL MICROBIOLOGY

It's all relative: ranking the diversity of aquatic bacterial communities

(2008) Allison K. Shaw et al.   ENVIRONMENTAL MICROBIOLOGY

Spatio-temporal niche separation of planktonicBetaproteobacteriain an oligo-mesotrophic lake

(2008) Michaela M. Salcher et al.   ENVIRONMENTAL MICROBIOLOGY

Ecophysiological differences of betaproteobacterial populations in two hydrochemically distinct compartments of a subtropical lagoon

(2008) Cecilia Alonso et al.   ENVIRONMENTAL MICROBIOLOGY

Abductive Inference: Implications for ‘Linnean’ and ‘Phylogenetic’ Approaches for Representing Biological Systematization

(2008) Kirk Fitzhugh   Evolutionary Biology

Potential for atmospheric deposition of bacteria to influence bacterioplankton communities

(2008) Stuart E. Jones et al.   FEMS MICROBIOLOGY ECOLOGY

High similarity between bacterioneuston and airborne bacterial community compositions in a high mountain lake area

(2008) Anna Hervas et al.   FEMS MICROBIOLOGY ECOLOGY

Effective isolation of bacterioplankton genus Polynucleobacter from freshwater environments grown on photochemically degraded dissolved organic matter

(2008) Keiji Watanabe et al.   FEMS MICROBIOLOGY ECOLOGY

Bacterial ‘cosmopolitanism’ and importance of local environmental factors for community composition in remote high-altitude lakes

(2008) RUBEN SOMMARUGA et al.   FRESHWATER BIOLOGY

Lakes and streams as sentinels of environmental change in terrestrial and atmospheric processes

(2008) Craig E Williamson et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

High diversity of cultivable heterotrophic bacteria in association with cyanobacterial water blooms

(2008) Katri A Berg et al.   ISME Journal

Integrating Markov Clustering and Molecular Phylogenetics to Reconstruct the Cyanobacterial Species Tree from Conserved Protein Families

(2008) W. D. Swingley et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria)

(2008) J. M. Gonzalez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Resource Partitioning and Sympatric Differentiation Among Closely Related Bacterioplankton

(2008) D. E. Hunt et al.   SCIENCE

CLIMATE: Blooms Like It Hot

(2008) H. W. Paerl et al.   SCIENCE

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY

Life in the extreme: thermoacidophilic methanotrophy

(2008) Jeremy D. Semrau et al.   TRENDS IN MICROBIOLOGY

Members of the Candidate Division OP10 are spread in a variety of environments

(2008) M. C. Portillo et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Clone library analysis reveals an unusual composition and strong habitat partitioning of pelagic bacterial communities in Lake Tanganyika

(2007) A De Wever et al.   AQUATIC MICROBIAL ECOLOGY