Computational Approaches for Pharmacovigilance Signal Detection: Toward Integrated and Semantically-Enriched Frameworks

Bridging Data Models and Terminologies to Support Adverse Drug Event Reporting Using EHR Data

(2015) S. Hussain et al.   METHODS OF INFORMATION IN MEDICINE

The EBI RDF platform: linked open data for the life sciences

(2014) S. Jupp et al.   BIOINFORMATICS

Toward Enhanced Pharmacovigilance Using Patient-Generated Data on the Internet

(2014) R W White et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

Pharmacovigilance for a Revolving World: Prospects of Patient-Generated Data on the Internet

(2014) G. Niklas Norén   DRUG SAFETY

Digital Drug Safety Surveillance: Monitoring Pharmaceutical Products in Twitter

(2014) Clark C. Freifeld et al.   DRUG SAFETY

Improved Statistical Signal Detection in Pharmacovigilance by Combining Multiple Strength-of-Evidence Aspects in vigiRank

(2014) Ola Caster et al.   DRUG SAFETY

Bridging Islands of Information to Establish an Integrated Knowledge Base of Drugs and Health Outcomes of Interest

(2014) Richard D. Boyce et al.   DRUG SAFETY

Text Mining for Adverse Drug Events: the Promise, Challenges, and State of the Art

(2014) Rave Harpaz et al.   DRUG SAFETY

Identifying plausible adverse drug reactions using knowledge extracted from the literature

(2014) Ning Shang et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Formalizing MedDRA to support semantic reasoning on adverse drug reaction terms

(2014) Cédric Bousquet et al.   JOURNAL OF BIOMEDICAL INFORMATICS

A framework to preserve the privacy of electronic health data streams

(2014) Soohyung Kim et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Standardizing adverse drug event reporting data

(2014) Liwei Wang et al.   Journal of Biomedical Semantics

Big data, big results: Knowledge discovery in output from large-scale analytics

(2014) Tyler H. McCormick et al.   Statistical Analysis and Data Mining

Pharmacovigilance Using Clinical Notes

(2013) P LePendu et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

Performance of Pharmacovigilance Signal-Detection Algorithms for the FDA Adverse Event Reporting System

(2013) R Harpaz et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

Empirical Performance of the Self-Controlled Case Series Design: Lessons for Developing a Risk Identification and Analysis System

(2013) Marc A. Suchard et al.   DRUG SAFETY

Empirical Performance of a Self-Controlled Cohort Method: Lessons for Developing a Risk Identification and Analysis System

(2013) Patrick B. Ryan et al.   DRUG SAFETY

Managing Data Quality for a Drug Safety Surveillance System

(2013) Abraham G. Hartzema et al.   DRUG SAFETY

Variation in Choice of Study Design: Findings from the Epidemiology Design Decision Inventory and Evaluation (EDDIE) Survey

(2013) Paul E. Stang et al.   DRUG SAFETY

How Well Do Various Health Outcome Definitions Identify Appropriate Cases in Observational Studies?

(2013) Richard A. Hansen et al.   DRUG SAFETY

Empirical Performance of the Case–Control Method: Lessons for Developing a Risk Identification and Analysis System

(2013) David Madigan et al.   DRUG SAFETY

Studying the Science of Observational Research: Empirical Findings from the Observational Medical Outcomes Partnership

(2013) Stephen J. W. Evans et al.   DRUG SAFETY

Alternative Outcome Definitions and Their Effect on the Performance of Methods for Observational Outcome Studies

(2013) Christian G. Reich et al.   DRUG SAFETY

Defining a Reference Set to Support Methodological Research in Drug Safety

(2013) Patrick B. Ryan et al.   DRUG SAFETY

The Development and Evaluation of Triage Algorithms for Early Discovery of Adverse Drug Interactions

(2013) Johanna Strandell et al.   DRUG SAFETY

Empirical Performance of a New User Cohort Method: Lessons for Developing a Risk Identification and Analysis System

(2013) Patrick B. Ryan et al.   DRUG SAFETY

Patient-Reported Outcome Measures in Safety Event Reporting: PROSPER Consortium Guidance

(2013) Anjan K. Banerjee et al.   DRUG SAFETY

Evaluation of Disproportionality Safety Signaling Applied to Healthcare Databases

(2013) William DuMouchel et al.   DRUG SAFETY

Data Mining of the Public Version of the FDA Adverse Event Reporting System

(2013) Toshiyuki Sakaeda et al.   International Journal of Medical Sciences

A method for controlling complex confounding effects in the detection of adverse drug reactions using electronic health records

(2013) Ying Li et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Signal detection on spontaneous reports of adverse events following immunisation: a comparison of the performance of a disproportionality-based algorithm and a time-to-onset-based algorithm

(2013) Lionel van Holle et al.   PHARMACOEPIDEMIOLOGY AND DRUG SAFETY

A conceptual approach to the masking effect of measures of disproportionality

(2013) Francois Maignen et al.   PHARMACOEPIDEMIOLOGY AND DRUG SAFETY

Comparison of algorithms that detect drug side effects using electronic healthcare databases

(2013) Jenna Marie Reps et al.   SOFT COMPUTING

Ontology-Based Querying with Bio2RDF’s Linked Open Data

(2013) Alison Callahan et al.   Journal of Biomedical Semantics

Novel Data-Mining Methodologies for Adverse Drug Event Discovery and Analysis

(2012) R Harpaz et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

Detection of Pharmacovigilance-Related Adverse Events Using Electronic Health Records and Automated Methods

(2012) K Haerian et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

Combing signals from spontaneous reports and electronic health records for detection of adverse drug reactions

(2012) Rave Harpaz et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Large-scale prediction of adverse drug reactions using chemical, biological, and phenotypic properties of drugs

(2012) Mei Liu et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Comparative analysis of pharmacovigilance methods in the detection of adverse drug reactions using electronic medical records

(2012) M. Liu et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Using Electronic Health Care Records for Drug Safety Signal Detection

(2012) Martijn J. Schuemie et al.   MEDICAL CARE

Ontology-Based Combinatorial Comparative Analysis of Adverse Events Associated with Killed and Live Influenza Vaccines

(2012) Sirarat Sarntivijai et al.   PLoS One

Empirical assessment of methods for risk identification in healthcare data: results from the experiments of the Observational Medical Outcomes Partnership

(2012) Patrick B. Ryan et al.   STATISTICS IN MEDICINE

Signal Detection and Monitoring Based on Longitudinal Healthcare Data

(2012) Marc Suling et al.   Pharmaceutics

Data Mining to Generate Adverse Drug Events Detection Rules

(2011) E. Chazard et al.   IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE

Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions

(2011) Wendy W Chapman et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Using information mining of the medical literature to improve drug safety

(2011) Kanaka D Shetty et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

A novel signal detection algorithm for identifying hidden drug-drug interactions in adverse event reports

(2011) Nicholas P Tatonetti et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Disproportionality methods for pharmacovigilance in longitudinal observational databases

(2011) Ivan Zorych et al.   STATISTICAL METHODS IN MEDICAL RESEARCH

A Decade of Data Mining and Still Counting

(2010) Manfred Hauben et al.   DRUG SAFETY

Development and evaluation of a common data model enabling active drug safety surveillance using disparate healthcare databases

(2010) Stephanie J Reisinger et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Methods for drug safety signal detection in longitudinal observational databases: LGPS and LEOPARD

(2010) Martijn J. Schuemie   PHARMACOEPIDEMIOLOGY AND DRUG SAFETY

Temporal pattern discovery in longitudinal electronic patient records

(2009) G. Niklas Norén et al.   DATA MINING AND KNOWLEDGE DISCOVERY

Decision support methods for the detection of adverse events in post-marketing data

(2009) M. Hauben et al.   DRUG DISCOVERY TODAY

Data mining on electronic health record databases for signal detection in pharmacovigilance: which events to monitor?

(2009) Gianluca Trifirò et al.   PHARMACOEPIDEMIOLOGY AND DRUG SAFETY