Role of epigenetics in crop improvement: Water and heat stress

Histone deacetylase HDA9 negatively regulates salt and drought stress responsiveness in Arabidopsis

(2016) Yu Zheng et al.   JOURNAL OF EXPERIMENTAL BOTANY

MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice

(2016) Ning Tang et al.   PLANT CELL

Differential expression of microRNAs and potential targets under drought stress in barley

(2016) Jannatul Ferdous et al.   PLANT CELL AND ENVIRONMENT

Deep sequencing of wheat sRNA transcriptome reveals distinct temporal expression pattern of miRNAs in response to heat, light and UV

(2016) Raja Ragupathy et al.   Scientific Reports

Identification of novel and conserved microRNAs in Panax notoginseng roots by high-throughput sequencing

(2015) Rongchang Wei et al.   BMC GENOMICS

Plant miRNAs: biogenesis, organization and origins

(2015) Hikmet Budak et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

miR408 overexpression causes increased drought tolerance in chickpea

(2015) Mortaza Hajyzadeh et al.   GENE

Involvement of DNA methylation in the control of cell growth during heat stress in tobacco BY-2 cells

(2015) Isabella Centomani et al.   PROTOPLASMA

Single-base-resolution methylomes of populus trichocarpa reveal the association between DNA methylation and drought stress

(2014) Dan Liang et al.   BMC GENETICS

Identification and characterization of the SET domain gene family in maize

(2014) Yexiong Qian et al.   MOLECULAR BIOLOGY REPORTS

Rice Fertilization-Independent Endosperm1 Regulates Seed Size under Heat Stress by Controlling Early Endosperm Development

(2014) J. J. Folsom et al.   PLANT PHYSIOLOGY

Transcriptional Regulation of Cell Cycle Genes in Response to Abiotic Stresses Correlates with Dynamic Changes in Histone Modifications in Maize

(2014) Lin Zhao et al.   PLoS One

Expression analysis of histone acetyltransferases in rice under drought stress

(2013) Hui Fang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Epigenetic marks in an adaptive water stress-responsive gene in tomato roots under normal and drought conditions

(2013) Rodrigo M González et al.   Epigenetics

Analysis of the DNA methylation of maize (Zea mays L.) in response to cold stress based on methylation-sensitive amplified polymorphisms

(2013) Xiaohui Shan et al.   JOURNAL OF PLANT BIOLOGY

Promoter-associated histone acetylation is involved in the osmotic stress-induced transcriptional regulation of the maizeZmDREB2Agene

(2013) Lin Zhao et al.   PHYSIOLOGIA PLANTARUM

Heat stress induction ofmiR398triggers a regulatory loop that is critical for thermotolerance in Arabidopsis

(2013) Qingmei Guan et al.   PLANT JOURNAL

GmNFYA3, a target gene of miR169, is a positive regulator of plant tolerance to drought stress

(2013) Zhiyong Ni et al.   PLANT MOLECULAR BIOLOGY

Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression

(2012) Xin Li et al.   BMC GENOMICS

Histone acetyltransferases in rice (Oryza sativa L.): phylogenetic analysis, subcellular localization and expression

(2012) Xia Liu et al.   BMC PLANT BIOLOGY

Chromatin modification and remodelling: a regulatory landscape for the control of Arabidopsis defence responses upon pathogen attack

(2012) Alexandre Berr et al.   CELLULAR MICROBIOLOGY

HD2C interacts with HDA6 and is involved in ABA and salt stress response in Arabidopsis

(2012) Ming Luo et al.   JOURNAL OF EXPERIMENTAL BOTANY

miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data

(2012) Jiyuan An et al.   NUCLEIC ACIDS RESEARCH

The Dynamic Changes of DNA Methylation and Histone Modifications of Salt Responsive Transcription Factor Genes in Soybean

(2012) Yuguang Song et al.   PLoS One

Loss of the DNA Methyltransferase MET1 Induces H3K9 Hypermethylation at PcG Target Genes and Redistribution of H3K27 Trimethylation to Transposons in Arabidopsis thaliana

(2012) Angelique Deleris et al.   PLoS Genetics

Atypical epigenetic mark in an atypical location: cytosine methylation at asymmetric (CNN) sites within the body of a non-repetitive tomato gene

(2011) Rodrigo M González et al.   BMC PLANT BIOLOGY

Identification and comparative analysis of drought-associated microRNAs in two cowpea genotypes

(2011) Blanca E Barrera-Figueroa et al.   BMC PLANT BIOLOGY

GmPHD5 acts as an important regulator for crosstalk between histone H3K4 di-methylation and H3K14 acetylation in response to salinity stress in soybean

(2011) Tao Wu et al.   BMC PLANT BIOLOGY

Impact of down-regulation of starch branching enzyme IIb in rice by artificial microRNA- and hairpin RNA-mediated RNA silencing

(2011) Vito M. Butardo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Regulation of miR319 during cold stress in sugarcane

(2011) FLÁVIA THIEBAUT et al.   PLANT CELL AND ENVIRONMENT

The Arabidopsis trithorax-like factor ATX1 functions in dehydration stress responses via ABA-dependent and ABA-independent pathways

(2011) Yong Ding et al.   PLANT JOURNAL

Histone Methylation in Higher Plants

(2010) Chunyan Liu et al.   Annual Review of Plant Biology

Over-expression of microRNA169 confers enhanced drought tolerance to tomato

(2010) Xiaohui Zhang et al.   BIOTECHNOLOGY LETTERS

Increasing the amylose content of durum wheat through silencing of the SBEIIa genes

(2010) Francesco Sestili et al.   BMC PLANT BIOLOGY

Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.)

(2010) Wen-Sheng Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide identification and analysis of drought-responsive microRNAs in Oryza sativa

(2010) Liguo Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Involvement of Arabidopsis histone deacetylase HDA6 in ABA and salt stress response

(2010) Li-Ting Chen et al.   JOURNAL OF EXPERIMENTAL BOTANY

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

(2010) Julie A. Law et al.   NATURE REVIEWS GENETICS

A RING finger E3 ligase gene, Oryza sativa Delayed Seed Germination 1 (OsDSG1), controls seed germination and stress responses in rice

(2010) Gi-Gyeong Park et al.   PLANT MOLECULAR BIOLOGY

miRNA expression patterns of Triticum dicoccoides in response to shock drought stress

(2010) Melda Kantar et al.   PLANTA

Polycomb and Trithorax control genome expression by determining the alternative chromatin epigenetic states for key developmental regulators

(2010) Yu. B. Schwartz et al.   RUSSIAN JOURNAL OF GENETICS

Epigenetic Reprogramming in Plant and Animal Development

(2010) Suhua Feng et al.   SCIENCE

Roles of Plant Small RNAs in Biotic Stress Responses

(2009) Virginia Ruiz-Ferrer et al.   Annual Review of Plant Biology

Rice histone deacetylase genes display specific expression patterns and developmental functions

(2009) Yongfeng Hu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Rice cytosine DNA methyltransferases - gene expression profiling during reproductive development and abiotic stress

(2009) Rita Sharma et al.   FEBS Journal

Differentially Expressed miRNAs Potentially Involved in the Regulation of Defense Mechanism to Drought Stress in Maize Seedlings

(2009) Liya Wei et al.   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Shoot-Specific Down-Regulation of Protein Farnesyltransferase (α-Subunit) for Yield Protection against Drought in Canola

(2009) Yang Wang et al.   Molecular Plant

Arabidopsis MSI1 Is Required for Negative Regulation of the Response to Drought Stress

(2009) Cristina Alexandre et al.   Molecular Plant

Analysis of DNA methylation of maize in response to osmotic and salt stress based on methylation-sensitive amplified polymorphism

(2009) Ming-pu Tan   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Alterations of Lysine Modifications on the Histone H3 N-Tail under Drought Stress Conditions in Arabidopsis thaliana

(2008) Jong-Myong Kim et al.   PLANT AND CELL PHYSIOLOGY

The Arabidopsis NFYA5 Transcription Factor Is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance

(2008) W.-X. Li et al.   PLANT CELL

Silencing of GmFAD3 gene by siRNA leads to low α-linolenic acids (18:3) of fad3-mutant phenotype in soybean [Glycine max (Merr.)]

(2008) Teresita Flores et al.   TRANSGENIC RESEARCH