Differential expression of microRNAs and potential targets under drought stress in barley

Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

(2015) Boon Huat Cheah et al.   BMC GENOMICS

Genomic tools to assist breeding for drought tolerance

(2015) Peter Langridge et al.   CURRENT OPINION IN BIOTECHNOLOGY

Role of microRNAs in plant drought tolerance

(2015) Jannatul Ferdous et al.   PLANT BIOTECHNOLOGY JOURNAL

Stress responsive miRNAs and isomiRs in cereals

(2015) Hikmet Budak et al.   PLANT SCIENCE

Identification of Reference Genes for Quantitative Expression Analysis of MicroRNAs and mRNAs in Barley under Various Stress Conditions

(2015) Jannatul Ferdous et al.   PLoS One

Genome-Wide Identification of MicroRNAs in Leaves and the Developing Head of Four Durum Genotypes during Water Deficit Stress

(2015) Haipei Liu et al.   PLoS One

Identification and characterization of microRNAs in oilseed rape (Brassica napus) responsive to infection with the pathogenic fungusVerticillium longisporumusingBrassicaAA (Brassica rapa) and CC (Brassica oleracea) as reference genomes

(2014) Dan Shen et al.   NEW PHYTOLOGIST

Differential expression of microRNAs and other small RNAs in barley between water and drought conditions

(2014) Michael Hackenberg et al.   PLANT BIOTECHNOLOGY JOURNAL

Protocol: a fast and simple in situ PCR method for localising gene expression in plant tissue

(2014) Asmini Athman et al.   Plant Methods

A Wheat CCAAT Box-Binding Transcription Factor Increases the Grain Yield of Wheat with Less Fertilizer Input

(2014) Baoyuan Qu et al.   PLANT PHYSIOLOGY

Planting the seed: target recognition of short guide RNAs

(2014) Tim Künne et al.   TRENDS IN MICROBIOLOGY

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

A convenient system for highly specific and sensitive detection of miRNA expression

(2013) X. Li et al.   RNA

A Comprehensive Expression Profile of MicroRNAs and Other Classes of Non-Coding Small RNAs in Barley Under Phosphorous-Deficient and -Sufficient Conditions

(2012) M. Hackenberg et al.   DNA RESEARCH

A Transgenic Transcription Factor (TaDREB3) in Barley Affects the Expression of MicroRNAs and Other Small Non-Coding RNAs

(2012) Michael Hackenberg et al.   PLoS One

Specific and sensitive quantitative RT-PCR of miRNAs with DNA primers

(2011) Ingrid Balcells et al.   BMC BIOTECHNOLOGY

Discovery of barley miRNAs through deep sequencing of short reads

(2011) Andreas W Schreiber et al.   BMC GENOMICS

Identification and comparative analysis of drought-associated microRNAs in two cowpea genotypes

(2011) Blanca E Barrera-Figueroa et al.   BMC PLANT BIOLOGY

Practical Aspects of microRNA Target Prediction

(2011) T. M. Witkos et al.   CURRENT MOLECULAR MEDICINE

Gene set analysis of genome-wide association studies: Methodological issues and perspectives

(2011) Lily Wang et al.   GENOMICS

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Gene silencing by microRNAs: contributions of translational repression and mRNA decay

(2011) Eric Huntzinger et al.   NATURE REVIEWS GENETICS

Involvement of miR169 in the nitrogen-starvation responses in Arabidopsis

(2011) Meng Zhao et al.   NEW PHYTOLOGIST

Target-align: a tool for plant microRNA target identification: Fig. 1.

(2010) Fuliang Xie et al.   BIOINFORMATICS

Regulation of barley miRNAs upon dehydration stress correlated with target gene expression

(2010) Melda Kantar et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Genome-wide identification and analysis of drought-responsive microRNAs in Oryza sativa

(2010) Liguo Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Expression profiling of microRNA using real-time quantitative PCR, how to use it and what is available

(2010) Vladimir Benes et al.   METHODS

miRNA expression patterns of Triticum dicoccoides in response to shock drought stress

(2010) Melda Kantar et al.   PLANTA

The biosynthetic pathways and biological scopes of plant small RNAs

(2010) Franck Vazquez et al.   TRENDS IN PLANT SCIENCE

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Gene Expression and Regulation of Higher Plants Under Soil Water Stress

(2009) Fu-Tai Ni et al.   CURRENT GENOMICS

The NAC-domain transcription factor GOBLET specifies leaflet boundaries in compound tomato leaves

(2009) Y. Berger et al.   DEVELOPMENT

Differentially Expressed miRNAs Potentially Involved in the Regulation of Defense Mechanism to Drought Stress in Maize Seedlings

(2009) Liya Wei et al.   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Shoot Na+ Exclusion and Increased Salinity Tolerance Engineered by Cell Type-Specific Alteration of Na+ Transport in Arabidopsis

(2009) I. S. Moller et al.   PLANT CELL

Phenotypic Plasticity of Adventitious Rooting in Arabidopsis Is Controlled by Complex Regulation of AUXIN RESPONSE FACTOR Transcripts and MicroRNA Abundance

(2009) L. Gutierrez et al.   PLANT CELL

miR398 and miR408 are up-regulated in response to water deficit in Medicago truncatula

(2009) Inês Trindade et al.   PLANTA

Identification of novel and candidate miRNAs in rice by high throughput sequencing

(2008) Ramanjulu Sunkar et al.   BMC PLANT BIOLOGY

Endogenous siRNA and miRNA Targets Identified by Sequencing of the Arabidopsis Degradome

(2008) Charles Addo-Quaye et al.   CURRENT BIOLOGY

The Arabidopsis NFYA5 Transcription Factor Is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance

(2008) W.-X. Li et al.   PLANT CELL

Experimental validation of miRNA targets

(2007) Donald E. Kuhn et al.   METHODS