Epigenetic marks in an adaptive water stress-responsive gene in tomato roots under normal and drought conditions

Comprehensive Analysis of Silencing Mutants Reveals Complex Regulation of the Arabidopsis Methylome

(2013) Hume Stroud et al.   CELL

Single-base resolution methylomes of tomato fruit development reveal epigenome modifications associated with ripening

(2013) Silin Zhong et al.   NATURE BIOTECHNOLOGY

The evolution of root hairs and rhizoids

(2012) Victor A.S. Jones et al.   ANNALS OF BOTANY

Detection of allele-specific methylation through a generalized heterogeneous epigenome model

(2012) Q. Peng et al.   BIOINFORMATICS

Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression

(2012) Xin Li et al.   BMC GENOMICS

Atypical DNA methylation of genes encoding cysteine-rich peptides in Arabidopsis thaliana

(2012) Wanhui You et al.   BMC PLANT BIOLOGY

Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants

(2012) Jiamu Du et al.   CELL

Epigenetic Inheritance: What News for Evolution?

(2012) Ben Hunter et al.   CURRENT BIOLOGY

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

DNA Methylation in Plants: Relationship to Small RNAs and Histone Modifications, and Functions in Transposon Inactivation

(2012) H. Saze et al.   PLANT AND CELL PHYSIOLOGY

Nuclear Import and Dimerization of Tomato ASR1, a Water Stress-Inducible Protein Exclusive to Plants

(2012) Martiniano M. Ricardi et al.   PLoS One

Atypical epigenetic mark in an atypical location: cytosine methylation at asymmetric (CNN) sites within the body of a non-repetitive tomato gene

(2011) Rodrigo M González et al.   BMC PLANT BIOLOGY

Epigenetic modifications in plants: an evolutionary perspective

(2011) Suhua Feng et al.   CURRENT OPINION IN PLANT BIOLOGY

Identification of genes required for de novo DNA methylation in Arabidopsis

(2011) Maxim V.C. Greenberg et al.   Epigenetics

Tissue-Specific Differences in Cytosine Methylation and Their Association with Differential Gene Expression in Sorghum

(2011) M. Zhang et al.   PLANT PHYSIOLOGY

Epigenetic performers in plants‡

(2010) Ming Chen et al.   DEVELOPMENT GROWTH & DIFFERENTIATION

Determining the conservation of DNA methylation in Arabidopsis

(2010) Nicolas Widman et al.   Epigenetics

Unlocking the Arabidopsis epigenome

(2010) Jon Reinders et al.   Epigenetics

Accurate sodium bisulfite sequencing in plants

(2010) Ian R. Henderson et al.   Epigenetics

DNA methylation systems and targets in plants

(2010) Peter Meyer   FEBS LETTERS

Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.)

(2010) Wen-Sheng Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

DNA cytosine methylation in plant development

(2010) Meishan Zhang et al.   Journal of Genetics and Genomics

Transgenerational Inheritance and Resetting of Stress-Induced Loss of Epigenetic Gene Silencing in Arabidopsis

(2010) Christina Lang-Mladek et al.   Molecular Plant

Regulated AtHKT1 Gene Expression by a Distal Enhancer Element and DNA Methylation in the Promoter Plays an Important Role in Salt Tolerance

(2010) Dongwon Baek et al.   PLANT AND CELL PHYSIOLOGY

Protocol: fine-tuning of a Chromatin Immunoprecipitation (ChIP) protocol in tomato

(2010) Martiniano M Ricardi et al.   Plant Methods

Transgenerational Adaptation of Arabidopsis to Stress Requires DNA Methylation and the Function of Dicer-Like Proteins

(2010) Alex Boyko et al.   PLoS One

Epigenetic Reprogramming in Plant and Animal Development

(2010) Suhua Feng et al.   SCIENCE

Epigenetic regulation of stress responses in plants

(2009) Viswanathan Chinnusamy et al.   CURRENT OPINION IN PLANT BIOLOGY

An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites

(2009) Asuka Miura et al.   EMBO JOURNAL

Genome-Wide and Organ-Specific Landscapes of Epigenetic Modifications and Their Relationships to mRNA and Small RNA Transcriptomes in Maize

(2009) X. Wang et al.   PLANT CELL

RNA-directed DNA methylation induces transcriptional activation in plants

(2009) K. Shibuya et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Kismeth: Analyzer of plant methylation states through bisulfite sequencing

(2008) Eyal Gruntman et al.   BMC BIOINFORMATICS

Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

(2008) Ryan Lister et al.   CELL

Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading

(2008) I. R. Henderson et al.   GENES & DEVELOPMENT

Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato

(2008) Mariano I. Giombini et al.   GENETICA

The Enigmatic LEA Proteins and Other Hydrophilins

(2008) M. Battaglia et al.   PLANT PHYSIOLOGY

Synergism between the chaperone-like activity of the stress regulated ASR1 protein and the osmolyte glycine-betaine

(2008) Zvia Konrad et al.   PLANTA

Tissue dependent variations of DNA methylation and endoreduplication levels during tomato fruit development and ripening

(2008) E. Teyssier et al.   PLANTA

When cells lose water: Lessons from biophysics and molecular biology

(2008) Julio J. Caramelo et al.   PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY

The Epigenetic Landscape of Plants

(2008) X. Zhang   SCIENCE

SRA-Domain Proteins Required for DRM2-Mediated De Novo DNA Methylation

(2008) Lianna M. Johnson et al.   PLoS Genetics

Epigenetic control of plant stress response

(2007) Alex Boyko et al.   ENVIRONMENTAL AND MOLECULAR MUTAGENESIS