Co-Expression Network and Pathway Analyses Reveal Important Modules of miRNAs Regulating Milk Yield and Component Traits

MicroRNA roles in signalling during lactation: an insight from differential expression, time course and pathway analyses of deep sequence data

(2017) Duy N. Do et al.   Scientific Reports

miRNA–miRNA crosstalk: from genomics to phenomics

(2016) Juan Xu et al.   BRIEFINGS IN BIOINFORMATICS

Lactogenic hormones alter cellular and extracellular microRNA expression in bovine mammary epithelial cell culture

(2016) Susumu Muroya et al.   Journal of Animal Science and Biotechnology

Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells

(2016) Ran Li et al.   PLoS One

Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil

(2015) Ran Li et al.   BMC GENOMICS

miR-135a Targets and Regulates Prolactin Receptor Gene in Goat Mammary Epithelial Cells

(2015) Zhibin Ji et al.   DNA AND CELL BIOLOGY

Epigenetic Regulation of miR-29s Affects the Lactation Activity of Dairy Cow Mammary Epithelial Cells

(2015) Yanjie Bian et al.   JOURNAL OF CELLULAR PHYSIOLOGY

MicroRNA regulatory networks in human adipose tissue and obesity

(2015) Peter Arner et al.   Nature Reviews Endocrinology

Go with the flow—biology and genetics of the lactation cycle

(2015) Eva M. Strucken et al.   Frontiers in Genetics

MiR-486 Regulates Lactation and Targets the PTEN Gene in Cow Mammary Glands

(2015) Dan Li et al.   PLoS One

MiR-221 promotes trastuzumab-resistance and metastasis in HER2-positive breast cancers by targeting PTEN

(2014) Xingming Ye et al.   BMB Reports

Transcriptome microRNA profiling of bovine mammary epithelial cells challenged with Escherichia coli or Staphylococcus aureus bacteria reveals pathogen directed microRNA expression profiles

(2014) Weiwu Jin et al.   BMC GENOMICS

miR-142-3p balances proliferation and differentiation of mesenchymal cells during lung development

(2014) G. Carraro et al.   DEVELOPMENT

MiR-21 Is under Control of STAT5 but Is Dispensable for Mammary Development and Lactation

(2014) Yonatan Feuermann et al.   PLoS One

MicroRNA-152 Regulates DNA Methyltransferase 1 and Is Involved in the Development and Lactation of Mammary Glands in Dairy Cows

(2014) Jie Wang et al.   PLoS One

Pten Regulates Development and Lactation in the Mammary Glands of Dairy Cows

(2014) Zhuoran Wang et al.   PLoS One

miR-18a Inhibits CDC42 and Plays a Tumour Suppressor Role in Colorectal Cancer Cells

(2014) Karen J. Humphreys et al.   PLoS One

Gene co-expression network analysis reveals common system-level properties of prognostic genes across cancer types

(2014) Yang Yang et al.   Nature Communications

Understanding cooperativity of microRNAs via microRNA association networks

(2013) Young-Ji Na et al.   BMC GENOMICS

MicroRNA-18a modulates STAT3 activity through negative regulation of PIAS3 during gastric adenocarcinogenesis

(2013) W Wu et al.   BRITISH JOURNAL OF CANCER

Sox4 Is a Master Regulator of Epithelial-Mesenchymal Transition by Controlling Ezh2 Expression and Epigenetic Reprogramming

(2013) Neha Tiwari et al.   CANCER CELL

The miR-17/92 cluster: a comprehensive update on its genomics, genetics, functions and increasingly important and numerous roles in health and disease

(2013) E Mogilyansky et al.   CELL DEATH AND DIFFERENTIATION

Cell intercalation from top to bottom

(2013) Elise Walck-Shannon et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

STAT3-dependent transactivation of miRNA genes following Toxoplasma gondii infection in macrophage

(2013) Yihong Cai et al.   Parasites & Vectors

Epithelial Cell Differentiation Regulated by MicroRNA-200a in Mammary Glands

(2013) Kentaro Nagaoka et al.   PLoS One

miR-221/222 Targets Adiponectin Receptor 1 to Promote the Epithelial-to-Mesenchymal Transition in Breast Cancer

(2013) Michael S. Hwang et al.   PLoS One

Transcriptional profiling of bovine milk using RNA sequencing

(2012) Saumya Wickramasinghe et al.   BMC GENOMICS

Expression profiles of microRNAs from lactating and non-lactating bovine mammary glands and identification of miRNA related to lactation

(2012) Zhen Li et al.   BMC GENOMICS

MicroRNA-regulated gene networks during mammary cell differentiation are associated with breast cancer

(2012) Eylem Aydoğdu et al.   CARCINOGENESIS

Autocrine prolactin induced by the Pten-Akt pathway is required for lactation initiation and provides a direct link between the Akt and Stat5 pathways

(2012) C.-C. Chen et al.   GENES & DEVELOPMENT

miR-148a Promoted Cell Proliferation by Targeting p27 in Gastric Cancer Cells

(2012) Shui-Long Guo et al.   International Journal of Biological Sciences

MicroRNA expression patterns in the bovine mammary gland are affected by stage of lactation1

(2012) M. Wang et al.   JOURNAL OF DAIRY SCIENCE

MiR-15a Decreases Bovine Mammary Epithelial Cell Viability and Lactation and Regulates Growth Hormone Receptor Expression

(2012) Hui-Ming Li et al.   MOLECULES

MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200

(2012) Laurent Galio et al.   PHYSIOLOGICAL GENOMICS

Discovering Dysfunction of Multiple MicroRNAs Cooperation in Disease by a Conserved MicroRNA Co-Expression Network

(2012) Yun Xiao et al.   PLoS One

Overexpression of miR-30b in the Developing Mouse Mammary Gland Causes a Lactation Defect and Delays Involution

(2012) Sandrine Le Guillou et al.   PLoS One

Planar Cell Polarity Controls Pancreatic Beta Cell Differentiation and Glucose Homeostasis

(2012) Cedric Cortijo et al.   Cell Reports

RYBP and Cbx7 Define Specific Biological Functions of Polycomb Complexes in Mouse Embryonic Stem Cells

(2012) Lluis Morey et al.   Cell Reports

Whole miRNome-wide Differential Co-expression of MicroRNAs

(2012) Cord F. Stäehler et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Dissecting the PCP pathway: One or more pathways?

(2011) Pascal Lapébie et al.   BIOESSAYS

The planar cell polarity pathway in vertebrate development

(2011) Carolien Wansleeben et al.   DEVELOPMENTAL DYNAMICS

Phospholipases A1

(2011) Gregory S. Richmond et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Conditional repression of STAT5 expression during lactation reveals its exclusive roles in mammary gland morphology, milk-protein gene expression, and neonate growth

(2011) Moshe Reichenstein et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

miR-141 and miR-200a act on ovarian tumorigenesis by controlling oxidative stress response

(2011) Bogdan Mateescu et al.   NATURE MEDICINE

Antagonistic roles of Notch and p63 in controlling mammary epithelial cell fates

(2010) Ö Yalcin-Ozuysal et al.   CELL DEATH AND DIFFERENTIATION

Identification and characterization of microRNAs in raw milk during different periods of lactation, commercial fluid and powdered milk products

(2010) Xi Chen et al.   CELL RESEARCH

miR-223 and miR-142 attenuate hematopoietic cell proliferation and miR-223 positively regulates miR-142 through LMO2 isoforms and CEBP-β

(2010) Wei Sun et al.   CELL RESEARCH

Transforming growth factor-beta (TGF-β) in human milk

(2010) S. SAITO et al.   CLINICAL AND EXPERIMENTAL IMMUNOLOGY

MiRNA–miRNA synergistic network: construction via co-regulating functional modules and disease miRNA topological features

(2010) Juan Xu et al.   NUCLEIC ACIDS RESEARCH

MicroRNA-221/222 confers breast cancer fulvestrant resistance by regulating multiple signaling pathways

(2010) X Rao et al.   ONCOGENE

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

(2009) Gabriela Bindea et al.   BIOINFORMATICS

Analyzing miRNA co-expression networks to explore TF-miRNA regulation

(2009) Sanghamitra Bandyopadhyay et al.   BMC BIOINFORMATICS

Interleukin-6 Modulates the Expression of the Bone Morphogenic Protein Receptor Type II Through a Novel STAT3–microRNA Cluster 17/92 Pathway

(2009) Matthias Brock et al.   CIRCULATION RESEARCH

A microRNA, miR-101a, controls mammary gland development by regulating cyclooxygenase-2 expression

(2009) Tetsuya Tanaka et al.   DIFFERENTIATION

Regulation of Oxytocin Receptor Responsiveness by G Protein-Coupled Receptor Kinase 6 in Human Myometrial Smooth Muscle

(2009) Jonathon M. Willets et al.   MOLECULAR ENDOCRINOLOGY

AmiGO: online access to ontology and annotation data

(2008) Seth Carbon et al.   BIOINFORMATICS

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Milking-to-Milking Variability for Milk Yield, Fat and Protein Percentage, and Somatic Cell Count

(2008) M.A. Quist et al.   JOURNAL OF DAIRY SCIENCE

Discovering microRNAs from deep sequencing data using miRDeep

(2008) Marc R Friedländer et al.   NATURE BIOTECHNOLOGY

Gene Regulation by Transcription Factors and MicroRNAs

(2008) O. Hobert   SCIENCE