Multilocus and SSU rRNA gene phylogenetic analyses of available cyanobacterial genomes, and their relation to the current taxonomic system
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Title
Multilocus and SSU rRNA gene phylogenetic analyses of available cyanobacterial genomes, and their relation to the current taxonomic system
Authors
Keywords
16S rRNA, Cyanobacterial orders, Multilocus phylogeny, Phylogenomics, Polyphasic approach
Journal
HYDROBIOLOGIA
Volume 811, Issue 1, Pages 19-34
Publisher
Springer Nature
Online
2017-09-12
DOI
10.1007/s10750-017-3373-2
References
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Note: Only part of the references are listed.- Cyanomargarita gen. nov. (Nostocales, Cyanobacteria): convergent evolution resulting in a cryptic genus
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- (2016) Janaina Rigonato et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
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- (2016) Sophie Mazard et al. Marine Drugs
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- (2015) Petr Dvořák et al. BIODIVERSITY AND CONSERVATION
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- (2015) Tomáš Hauer et al. BIODIVERSITY AND CONSERVATION
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- (2015) Virginie Gaget et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Naming Cyanophyta/Cyanobacteria - a bacteriologist's view.
- (2015) Aharon Oren Fottea
- Intra-genomic 16S rRNA gene heterogeneity in cyanobacterial genomes.
- (2015) Niclas Engene et al. Fottea
- Seven new species ofOculatella(Pseudanabaenales, Cyanobacteria): taxonomically recognizing cryptic diversification
- (2014) Karina Osorio-Santos et al. EUROPEAN JOURNAL OF PHYCOLOGY
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- (2014) Susan Bennett Wilde et al. Phytotaxa
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- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- The Primitive Thylakoid-Less Cyanobacterium Gloeobacter Is a Common Rock-Dwelling Organism
- (2013) Jan Mareš et al. PLoS One
- The Effect of Primer Choice and Short Read Sequences on the Outcome of 16S rRNA Gene Based Diversity Studies
- (2013) Jonas Ghyselinck et al. PLoS One
- Cultivation and Complete Genome Sequencing of Gloeobacter kilaueensis sp. nov., from a Lava Cave in Kīlauea Caldera, Hawai'i
- (2013) Jimmy H. W. Saw et al. PLoS One
- Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
- (2013) P. M. Shih et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolution of multicellularity coincided with increased diversification of cyanobacteria and the Great Oxidation Event
- (2013) B. E. Schirrmeister et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- jModelTest 2: more models, new heuristics and parallel computing
- (2012) Diego Darriba et al. NATURE METHODS
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- (2012) Fredrik Ronquist et al. SYSTEMATIC BIOLOGY
- ProtTest 3: fast selection of best-fit models of protein evolution
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