Urban landscape genomics identifies fine-scale gene flow patterns in an avian invasive

Saving two birds with one stone: solving the quandary of introduced, threatened species

(2017) Luke Gibson et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Insights into the Introduction History and Population Genetic Dynamics of the Nile Monitor (Varanus niloticus) in Florida

(2016) Jared P. Wood et al.   JOURNAL OF HEREDITY

Selection on Mitochondrial Variants Occurs between and within Individuals in an Expanding Invasion

(2016) Lee A. Rollins et al.   MOLECULAR BIOLOGY AND EVOLUTION

An Ecological and Evolutionary Framework for Commensalism in Anthropogenic Environments

(2016) Ardern Hulme-Beaman et al.   TRENDS IN ECOLOGY & EVOLUTION

Beyond the Coral Triangle: high genetic diversity and near panmixia in Singapore's populations of the broadcast spawning sea starProtoreaster nodosus

(2016) Y. C. Tay et al.   Royal Society Open Science

Applications of next-generation sequencing to the study of biological invasions

(2015) Marc Rius et al.   Current Zoology

What we still don't know about invasion genetics

(2015) Dan G. Bock et al.   MOLECULAR ECOLOGY

Genetic reconstructions of invasion history

(2015) Melania E. Cristescu   MOLECULAR ECOLOGY

netview p: a network visualization tool to unravel complex population structure using genome-wide SNPs

(2015) Eike J. Steinig et al.   Molecular Ecology Resources

Applications of next-generation sequencing to the study of biological invasions

(2015) Marc Rius et al.   Current Zoology

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

DIYABC v2.0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data

(2014) Jean-Marie Cornuet et al.   BIOINFORMATICS

Evaluation of demographic history and neutral parameterization on the performance ofFSToutlier tests

(2014) Katie E. Lotterhos et al.   MOLECULAR ECOLOGY

Whole-genome analyses resolve early branches in the tree of life of modern birds

(2014) E. D. Jarvis et al.   SCIENCE

Comparative genomics reveals insights into avian genome evolution and adaptation

(2014) G. Zhang et al.   SCIENCE

The genomic landscape underlying phenotypic integrity in the face of gene flow in crows

(2014) J. W. Poelstra et al.   SCIENCE

Can genetic data confirm or refute historical records? The island invasion of the small Indian mongoose (Herpestes auropunctatus)

(2013) Arijana Barun et al.   BIOLOGICAL INVASIONS

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

NeEstimatorv2: re-implementation of software for the estimation of contemporary effective population size (Ne) from genetic data

(2013) C. Do et al.   Molecular Ecology Resources

A high-performance computing toolset for relatedness and principal component analysis of SNP data

(2012) X. Zheng et al.   BIOINFORMATICS

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

(2012) R. Peakall et al.   BIOINFORMATICS

Complete mitochondrial genomes and a novel spatial genetic method reveal cryptic phylogeographical structure and migration patterns among brown bears in north-western Eurasia

(2012) Marju Keis et al.   JOURNAL OF BIOGEOGRAPHY

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

Is It Benign or Is It a Pariah? Empirical Evidence for the Impact of the Common Myna (Acridotheres tristis) on Australian Birds

(2012) Kate Grarock et al.   PLoS One

NetView: A High-Definition Network-Visualization Approach to Detect Fine-Scale Population Structures from Genome-Wide Patterns of Variation

(2012) Markus Neuditschko et al.   PLoS One

Reevaluating Assembly Evaluations with Feature Response Curves: GAGE and Assemblathons

(2012) Francesco Vezzi et al.   PLoS One

Recent Explosive Human Population Growth Has Resulted in an Excess of Rare Genetic Variants

(2012) A. Keinan et al.   SCIENCE

Ecological genetics of invasive alien species

(2011) L.-J. Lawson Handley et al.   BIOCONTROL

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Small founding number and low genetic diversity in an introduced species exhibiting limited invasion success (speckled dace,Rhinichthys osculus)

(2011) Andrew P. Kinziger et al.   Ecology and Evolution

Stacks : Building and Genotyping Loci De Novo From Short-Read Sequences

(2011) Julian M. Catchen et al.   G3-Genes Genomes Genetics

Glacier retreat on South Georgia and implications for the spread of rats

(2010) A.J. Cook et al.   ANTARCTIC SCIENCE

Some alien birds have as severe an impact as the most effectual alien mammals in Europe

(2010) Sabrina Kumschick et al.   BIOLOGICAL CONSERVATION

Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0)

(2010) Jean-Marie Cornuet et al.   BMC BIOINFORMATICS

Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus

(2010) ARNAUD ESTOUP et al.   Molecular Ecology Resources

The genome of a songbird

(2010) Wesley C. Warren et al.   NATURE

Bridgehead Effect in the Worldwide Invasion of the Biocontrol Harlequin Ladybird

(2010) Eric Lombaert et al.   PLoS One

Resolving postglacial phylogeography using high-throughput sequencing

(2010) K. J. Emerson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

(2010) S. Gnerre et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

(2010) Paul A. Hohenlohe et al.   PLoS Genetics

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Case-control association testing in the presence of unknown relationships

(2009) Yoonha Choi et al.   GENETIC EPIDEMIOLOGY

ABySS: A parallel assembler for short read sequence data

(2009) J. T. Simpson et al.   GENOME RESEARCH

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH

Invasive species can't cover their tracks: using microsatellites to assist management of starling (Sturnus vulgaris) populations in Western Australia

(2009) LEE ANN ROLLINS et al.   MOLECULAR ECOLOGY

Inferring population history with DIY ABC: a user-friendly approach to approximate Bayesian computation

(2008) Jean-Marie Cornuet et al.   BIOINFORMATICS

History, chance and adaptation during biological invasion: separating stochastic phenotypic evolution from response to selection

(2008) Stephen R. Keller et al.   ECOLOGY LETTERS

Estimation of effective number of breeders from molecular coancestry of single cohort sample

(2008) Tetsuro Nomura   Evolutionary Applications

ORIGIN OF THE AVIFAUNA OF URBAN AND SUBURBAN SINGAPORE

(2008) Peter Ward   IBIS

Nb_HetEx: A Program to Estimate the Effective Number of Breeders

(2008) O. L. Zhdanova et al.   JOURNAL OF HEREDITY

Social constraint and an absence of sex-biased dispersal drive fine-scale genetic structure in white-winged choughs

(2008) N. R. BECK et al.   MOLECULAR ECOLOGY

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One

Maps of random walks on complex networks reveal community structure

(2008) M. Rosvall et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Founding events in species invasions: genetic variation, adaptive evolution, and the role of multiple introductions

(2007) K. M. DLUGOSCH et al.   MOLECULAR ECOLOGY