Beyond the Coral Triangle: high genetic diversity and near panmixia in Singapore's populations of the broadcast spawning sea starProtoreaster nodosus

New view of population genetics of zooplankton: RAD-seq analysis reveals population structure of the North Atlantic planktonic copepod Centropages typicus

(2016) L. Blanco-Bercial et al.   MOLECULAR ECOLOGY

Population structure of Atlantic mackerel inferred from RAD-seq-derived SNP markers: effects of sequence clustering parameters and hierarchical SNP selection

(2016) Naiara Rodríguez-Ezpeleta et al.   Molecular Ecology Resources

Pelagic Larval Duration and Dispersal Distance Revisited

(2016) Alan L. Shanks   BIOLOGICAL BULLETIN

Latitude-wide genetic patterns reveal historical effects and contrasting patterns of turnover and nestedness at the range peripheries of a tropical marine fish

(2015) Libby Liggins et al.   ECOGRAPHY

Shared and nonshared genomic divergence in parallel ecotypes ofLittorina saxatilisat a local scale

(2015) Mark Ravinet et al.   MOLECULAR ECOLOGY

Trans-Pacific RAD-Seq population genomics confirms introgressive hybridization in Eastern Pacific Pocillopora corals

(2015) David J. Combosch et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Support for a ‘Center of Origin’ in the Coral Triangle: Cryptic diversity, recent speciation, and local endemism in a diverse lineage of reef fishes (Gobiidae: Eviota)

(2015) Luke Tornabene et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

PyRAD: assembly of de novo RADseq loci for phylogenetic analyses

(2014) Deren A. R. Eaton   BIOINFORMATICS

Concordance between phylogeographic and biogeographic boundaries in the Coral Triangle: conservation implications based on comparative analyses of multiple giant clam species

(2014) Timery S DeBoer et al.   BULLETIN OF MARINE SCIENCE

Genetic connectivity of the broadcast spawning reef coral Platygyra sinensis on impacted reefs, and the description of new microsatellite markers

(2014) Y. C. Tay et al.   CORAL REEFS

Genome-wide single-generation signatures of local selection in the panmictic European eel

(2014) J. M. Pujolar et al.   MOLECULAR ECOLOGY

‘Direct PCR’ optimization yields a rapid, cost-effective, nondestructive and efficient method for obtaining DNA barcodes without DNA extraction

(2014) Wing Hing Wong et al.   Molecular Ecology Resources

Extraordinary diversity of reef corals in the South China Sea

(2014) Danwei Huang et al.   Marine Biodiversity

Genome-wide signatures of population bottlenecks and diversifying selection in European wolves

(2013) M Pilot et al.   HEREDITY

Mitochondrial Haplotypes Indicate Parapatric-like Phylogeographic Structure in Blue-Spotted Maskray (Neotrygon kuhlii) from the Coral Triangle Region

(2013) Irma S. Arlyza et al.   JOURNAL OF HEREDITY

Pronounced genetic structure in a highly mobile coral reef fish, Caesio cuning, in the Coral Triangle

(2013) AS Ackiss et al.   MARINE ECOLOGY PROGRESS SERIES

Development of 10 novel polymorphic microsatellite markers for the Indo-Pacific horned starfish, Protoreaster nodosus

(2013) Yuichi Nakajima et al.   Marine Genomics

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The population structure and recent colonization history of Oregon threespine stickleback determined using restriction-site associated DNA-sequencing

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Going where traditional markers have not gone before: utility of and promise for RAD sequencing in marine invertebrate phylogeography and population genomics

(2013) A. M. Reitzel et al.   MOLECULAR ECOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

New SNPs for population genetic analysis reveal possible cryptic speciation of eastern Australian sea mullet (Mugil cephalus)

(2013) Nils C. Krück et al.   Molecular Ecology Resources

The origins of tropical marine biodiversity

(2013) Brian W. Bowen et al.   TRENDS IN ECOLOGY & EVOLUTION

diveRsity: AnRpackage for the estimation and exploration of population genetics parameters and their associated errors

(2013) Kevin Keenan et al.   Methods in Ecology and Evolution

Resilience to Climate Change in Coastal Marine Ecosystems

(2012) Joanna R. Bernhardt et al.   Annual Review of Marine Science

Simulating the transport of broadcast coral larvae among the Southern Islands of Singapore

(2012) YC Tay et al.   Aquatic Biology

Reproductive Output and Duration of the Pelagic Larval Stage Determine Seascape-Wide Connectivity of Marine Populations

(2012) Eric A. Treml et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Recognition of individual knobby sea stars Protoreaster nodosus (L., 1758) using aboral surface characteristics

(2012) C.K. Chim et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Theoretical limits to the correlation between pelagic larval duration and population genetic structure

(2012) SØREN FAURBY et al.   MOLECULAR ECOLOGY

Understanding age-specific dispersal in fishes through hydrodynamic modelling, genetic simulations and microsatellite DNA analysis

(2012) OLIVER BERRY et al.   MOLECULAR ECOLOGY

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

Estimates of Genetic Differentiation Measured by FST Do Not Necessarily Require Large Sample Sizes When Using Many SNP Markers

(2012) Eva-Maria Willing et al.   PLoS One

Development of 15 microsatellite loci for Protoreaster nodosus (Echinodermata; Asteroidea)

(2012) Benjamin J. Wainwright et al.   Conservation Genetics Resources

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

Connectivity and the development of population genetic structure in Indo-West Pacific coral reef communities

(2011) Johnathan T. Kool et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Comparative phylogeography and connectivity of sibling species of the marine copepod Clausocalanus (Calanoida)

(2011) Leocadio Blanco-Bercial et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Coastal pollution limits pelagic larval dispersal

(2011) Jonathan B. Puritz et al.   Nature Communications

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

HapStar: automated haplotype network layout and visualization

(2010) A. G. F. TEACHER et al.   Molecular Ecology Resources

Statistical Phylogeography

(2009) L. Lacey Knowles   Annual Review of Ecology Evolution and Systematics

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Connectivity, biodiversity conservation and the design of marine reserve networks for coral reefs

(2009) G. R. Almany et al.   CORAL REEFS

Inferring weak population structure with the assistance of sample group information

(2009) MELISSA J. HUBISZ et al.   Molecular Ecology Resources

Larval Dispersal and Marine Population Connectivity

(2008) Robert K. Cowen et al.   Annual Review of Marine Science

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Theme section on “Larval connectivity, resilience and the future of coral reefs”

(2008) G. P. Jones et al.   CORAL REEFS

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

Population dynamics, reproduction and growth of the Indo-Pacific horned sea star, Protoreaster nodosus (Echinodermata; Asteroidea)

(2008) Arthur R. Bos et al.   MARINE BIOLOGY

Comparative phylogeography of two seastars and their ectosymbionts within the Coral Triangle

(2008) ERIC D. CRANDALL et al.   MOLECULAR ECOLOGY

GSTand its relatives do not measure differentiation

(2008) LOU JOST   MOLECULAR ECOLOGY