Capturing in vivo RNA transcriptional dynamics from the malaria parasite Plasmodium falciparum

Plasmodium Merozoite TRAP Family Protein Is Essential for Vacuole Membrane Disruption and Gamete Egress from Erythrocytes

(2016) Daniel Y. Bargieri et al.   Cell Host & Microbe

Proteomic Analysis of thePlasmodium bergheiGametocyte Egressome and Vesicular bioID of Osmiophilic Body Proteins Identifies Merozoite TRAP-like Protein (MTRAP) as an Essential Factor for Parasite Transmission

(2016) Jessica Kehrer et al.   MOLECULAR & CELLULAR PROTEOMICS

Integrated transcriptomic and proteomic analyses ofP. falciparumgametocytes: molecular insight into sex-specific processes and translational repression

(2016) Edwin Lasonder et al.   NUCLEIC ACIDS RESEARCH

Translational regulation in blood stages of the malaria parasite Plasmodium spp. : systems-wide studies pave the way

(2016) Shruthi Sridhar Vembar et al.   Wiley Interdisciplinary Reviews-RNA

A bioinformatic survey of RNA-binding proteins in Plasmodium

(2015) BP Niranjan Reddy et al.   BMC GENOMICS

Specific expression and export of the Plasmodium falciparum Gametocyte EXported Protein-5 marks the gametocyte ring stage

(2015) Marta Tibúrcio et al.   MALARIA JOURNAL

Sexual development in Plasmodium parasites: knowing when it's time to commit

(2015) Gabrielle A. Josling et al.   NATURE REVIEWS MICROBIOLOGY

Triaging informative cis-regulatory elements for the combinatorial control of temporal gene expression during Plasmodium falciparum intraerythrocytic development

(2015) Karen Russell et al.   Parasites & Vectors

Global transcriptional repression: An initial and essential step forPlasmodiumsexual development

(2015) Masao Yuda et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic Investigation of Tricarboxylic Acid Metabolism during the Plasmodium falciparum Life Cycle

(2015) Hangjun Ke et al.   Cell Reports

Transcriptional profiling defines dynamics of parasite tissue sequestration during malaria infection

(2015) Karell G Pelle et al.   Genome Medicine

Translational regulation during stage transitions in malaria parasites

(2014) Liwang Cui et al.   Annals of the New York Academy of Sciences

Heterochromatin Protein 1 Secures Survival and Transmission of Malaria Parasites

(2014) Nicolas M.B. Brancucci et al.   Cell Host & Microbe

Sex-partitioning of thePlasmodium falciparumStage V Gametocyte Proteome Provides Insight intofalciparum-specific Cell Biology

(2014) Dingyin Tao et al.   MOLECULAR & CELLULAR PROTEOMICS

A cascade of DNA-binding proteins for sexual commitment and development in Plasmodium

(2014) Abhinav Sinha et al.   NATURE

A transcriptional switch underlies commitment to sexual development in malaria parasites

(2014) Björn F. C. Kafsack et al.   NATURE

Emerging roles of tRNA in adaptive translation, signalling dynamics and disease

(2014) Sebastian Kirchner et al.   NATURE REVIEWS GENETICS

Determination of in vivo RNA kinetics using RATE-seq

(2014) Benjamin Neymotin et al.   RNA

Genome-wide regulatory dynamics of translation in the Plasmodium falciparum asexual blood stages

(2014) Florence Caro et al.   eLife

Genome-wide Mapping of Cellular Protein–RNA Interactions Enabled by Chemical Crosslinking

(2014) Xiaoyu Li et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Mitochondrial metabolism of sexual and asexual blood stages of the malaria parasite Plasmodium falciparum

(2013) James I MacRae et al.   BMC BIOLOGY

Perturbations ofPlasmodium Puf2 expression and RNA-seq of Puf2-deficient sporozoites reveal a critical role in maintaining RNA homeostasis and parasite transmissibility

(2013) Scott E. Lindner et al.   CELLULAR MICROBIOLOGY

Mouse TU tagging: a chemical/genetic intersectional method for purifying cell type-specific nascent RNA

(2013) L. Gay et al.   GENES & DEVELOPMENT

Puf Mediates Translation Repression of Transmission-Blocking Vaccine Candidates in Malaria Parasites

(2013) Jun Miao et al.   PLoS Pathogens

Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum

(2013) Evelien M Bunnik et al.   GENOME BIOLOGY

Disentangling the Many Layers of Eukaryotic Transcriptional Regulation

(2012) Katherine M. Lelli et al.   Annual Review of Genetics

Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins

(2012) Alfredo Castello et al.   CELL

Transcriptional variation in the malaria parasite Plasmodium falciparum

(2012) N. Rovira-Graells et al.   GENOME RESEARCH

Comparative dynamic transcriptome analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation

(2012) M. Sun et al.   GENOME RESEARCH

The cellular and molecular basis for malaria parasite invasion of the human red blood cell

(2012) Alan F. Cowman et al.   JOURNAL OF CELL BIOLOGY

The mRNA-Bound Proteome and Its Global Occupancy Profile on Protein-Coding Transcripts

(2012) Alexander G. Baltz et al.   MOLECULAR CELL

Identification of an AP2-family Protein That Is Critical for Malaria Liver Stage Development

(2012) Shiroh Iwanaga et al.   PLoS One

Plasmodium falciparum Gametocyte Development 1 (Pfgdv1) and Gametocytogenesis Early Gene Identification and Commitment to Sexual Development

(2012) Saliha Eksi et al.   PLoS Pathogens

Directional gene expression and antisense transcripts in sexual and asexual stages of Plasmodium falciparum

(2011) María J López-Barragán et al.   BMC GENOMICS

Gametocytogenesis in malaria parasite: commitment, development and regulation

(2011) Zhenyu Liu et al.   Future Microbiology

Quantitative Time-course Profiling of Parasite and Host Cell Proteins in the Human Malaria ParasitePlasmodium falciparum

(2011) Bernardo Javier Foth et al.   MOLECULAR & CELLULAR PROTEOMICS

Dynamic profiling of mRNA turnover reveals gene-specific and system-wide regulation of mRNA decay

(2011) Sarah E. Munchel et al.   MOLECULAR BIOLOGY OF THE CELL

Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast

(2011) C. Miller et al.   Molecular Systems Biology

PfAlbas constitute a new eukaryotic DNA/RNA-binding protein family in malaria parasites

(2011) Arnaud Chêne et al.   NUCLEIC ACIDS RESEARCH

Quantitative assessment of Plasmodium falciparum sexual development reveals potent transmission-blocking activity by methylene blue

(2011) S. H. Adjalley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of RNA-protein interaction networks using PAR-CLIP

(2011) Manuel Ascano et al.   Wiley Interdisciplinary Reviews-RNA

Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP

(2010) Markus Hafner et al.   CELL

The Puf-family RNA-binding protein PfPuf2 regulates sexual development and sex differentiation in the malaria parasite Plasmodium falciparum

(2010) J. Miao et al.   JOURNAL OF CELL SCIENCE

Protein Export Marks the Early Phase of Gametocytogenesis of the Human Malaria ParasitePlasmodium falciparum

(2010) Francesco Silvestrini et al.   MOLECULAR & CELLULAR PROTEOMICS

The Apicomplexan AP2 family: Integral factors regulating Plasmodium development

(2010) Heather J. Painter et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

New insights into the blood-stage transcriptome ofPlasmodium falciparumusing RNA-Seq

(2010) Thomas D. Otto et al.   MOLECULAR MICROBIOLOGY

Identification and Genome-Wide Prediction of DNA Binding Specificities for the ApiAP2 Family of Regulators from the Malaria Parasite

(2010) Tracey L. Campbell et al.   PLoS Pathogens

Universal Features of Post-Transcriptional Gene Regulation Are Critical for Plasmodium Zygote Development

(2010) Gunnar R. Mair et al.   PLoS Pathogens

From cradle to grave: RNA biology in malaria parasites

(2010) Katie R. Hughes et al.   Wiley Interdisciplinary Reviews-RNA

PAR-CliP - A Method to Identify Transcriptome-wide the Binding Sites of RNA Binding Proteins

(2010) Markus Hafner et al.   Jove-Journal of Visualized Experiments

Metabolic tagging and purification of nascent RNA: implications for transcriptomics

(2009) Caroline C. Friedel et al.   Molecular BioSystems

TU-tagging: cell type–specific RNA isolation from intact complex tissues

(2009) Michael R Miller et al.   NATURE METHODS

Discovering regulatory motifs in the Plasmodium genome using comparative genomics

(2008) Jie Wu et al.   BIOINFORMATICS

In silico discovery of transcription regulatory elements in Plasmodium falciparum

(2008) Jason A Young et al.   BMC GENOMICS

Sex- and stage-specific reporter gene expression in Plasmodium falciparum

(2008) Saliha Eksi et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay

(2008) L. Dolken et al.   RNA

Quantitative protein expression profiling reveals extensive post-transcriptional regulation and post-translational modifications in schizont-stage malaria parasites

(2008) Bernardo J Foth et al.   GENOME BIOLOGY