- Home
- Publications
- Publication Search
- Publication Details
Title
Rapid Evolution of microRNA Loci in the Brown Algae
Authors
Keywords
-
Journal
Genome Biology and Evolution
Volume 9, Issue 3, Pages 740-749
Publisher
Oxford University Press (OUP)
Online
2017-02-27
DOI
10.1093/gbe/evx038
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus
- (2016) Alexandre Cormier et al. NEW PHYTOLOGIST
- A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome
- (2015) Bastian Fromm et al. Annual Review of Genetics
- Molecular phylogeny of two unusual brown algae,Phaeostrophion irregulareandPlatysiphon glacialis, proposal of the Stschapoviales ord. nov. and Platysiphonaceae fam. nov., and a re-examination of divergence times for brown algal orders
- (2015) Hiroshi Kawai et al. JOURNAL OF PHYCOLOGY
- microRNAs and the evolution of complex multicellularity: identification of a large, diverse complement of microRNAs in the brown algaEctocarpus
- (2015) James E. Tarver et al. NUCLEIC ACIDS RESEARCH
- The EMBL-EBI bioinformatics web and programmatic tools framework
- (2015) Weizhong Li et al. NUCLEIC ACIDS RESEARCH
- Conserved and novel heat stress-responsive microRNAs were identified by deep sequencing inSaccharina japonica(Laminariales, Phaeophyta)
- (2015) FULI LIU et al. PLANT CELL AND ENVIRONMENT
- The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis
- (2015) S. Lin et al. SCIENCE
- Saccharina genomes provide novel insight into kelp biology
- (2015) Naihao Ye et al. Nature Communications
- Global discovery and characterization of small non-coding RNAs in marine microalgae
- (2014) Sara Lopez-Gomollon et al. BMC GENOMICS
- The diversity of small non-coding RNAs in the diatom Phaeodactylum tricornutum
- (2014) Alessandra Rogato et al. BMC GENOMICS
- Evolutionary history of plant microRNAs
- (2014) Richard S. Taylor et al. TRENDS IN PLANT SCIENCE
- miRNAs: Small Genes with Big Potential in Metazoan Phylogenetics
- (2013) James E. Tarver et al. MOLECULAR BIOLOGY AND EVOLUTION
- Do miRNAs have a deep evolutionary history?
- (2012) James E. Tarver et al. BIOESSAYS
- ArabidopsisArgonaute MID domains use their nucleotide specificity loop to sort small RNAs
- (2012) Filipp Frank et al. EMBO JOURNAL
- Origins and Evolution of MicroRNA Genes in Plant Species
- (2012) Masafumi Nozawa et al. Genome Biology and Evolution
- Evolution of Animal and Plant Dicers: Early Parallel Duplications and Recurrent Adaptation of Antiviral RNA Binding in Plants
- (2012) Krishanu Mukherjee et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evolution and function of the extended miR-2 microRNA family
- (2012) Antonio Marco et al. RNA Biology
- MicroRNAs in Amoebozoa: Deep sequencing of the small RNA population in the social amoeba Dictyostelium discoideum reveals developmentally regulated microRNAs
- (2012) L. Avesson et al. RNA
- Mirtrons, an emerging class of atypical miRNA
- (2012) Helen J. Curtis et al. Wiley Interdisciplinary Reviews-RNA
- SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
- (2012) Ruibang Luo et al. GigaScience
- ViennaRNA Package 2.0
- (2011) Ronny Lorenz et al. Algorithms for Molecular Biology
- miRDeep-P: a computational tool for analyzing the microRNA transcriptome in plants
- (2011) Xiaozeng Yang et al. BIOINFORMATICS
- microRNA complements in deuterostomes: origin and evolution of microRNAs
- (2011) Florent Campo-Paysaa et al. EVOLUTION & DEVELOPMENT
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
- (2011) K. Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evolution of microRNA diversity and regulation in animals
- (2011) Eugene Berezikov NATURE REVIEWS GENETICS
- miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
- (2011) Marc R. Friedländer et al. NUCLEIC ACIDS RESEARCH
- MicroRNA–offset RNAs (moRNAs): by-product spectators or functional players?
- (2011) Stefania Bortoluzzi et al. TRENDS IN MOLECULAR MEDICINE
- Vive la différence: biogenesis and evolution of microRNAs in plants and animals
- (2011) Michael J Axtell et al. GENOME BIOLOGY
- TAPIR, a web server for the prediction of plant microRNA targets, including target mimics
- (2010) Eric Bonnet et al. BIOINFORMATICS
- Origins and Evolution of MicroRNA Genes in Drosophila Species
- (2010) Masafumi Nozawa et al. Genome Biology and Evolution
- Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
- (2010) E. Berezikov et al. GENOME RESEARCH
- Diverse Pathways Generate MicroRNA-like RNAs and Dicer-Independent Small Interfering RNAs in Fungi
- (2010) Heng-Chi Lee et al. MOLECULAR CELL
- A multi-locus time-calibrated phylogeny of the brown algae (Heterokonta, Ochrophyta, Phaeophyceae): Investigating the evolutionary nature of the “brown algal crown radiation”
- (2010) Thomas Silberfeld et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- The Ectocarpus genome and the independent evolution of multicellularity in brown algae
- (2010) J. Mark Cock et al. NATURE
- Structural basis for 5′-nucleotide base-specific recognition of guide RNA by human AGO2
- (2010) Filipp Frank et al. NATURE
- miRBase: integrating microRNA annotation and deep-sequencing data
- (2010) A. Kozomara et al. NUCLEIC ACIDS RESEARCH
- Multiple distinct small RNAs originate from the same microRNA precursors
- (2010) Weixiong Zhang et al. GENOME BIOLOGY
- MicroRNAs and metazoan macroevolution: insights into canalization, complexity, and the Cambrian explosion
- (2009) Kevin J. Peterson et al. BIOESSAYS
- Evidence for human microRNA-offset RNAs in small RNA sequencing data
- (2009) D. Langenberger et al. BIOINFORMATICS
- MicroRNAs: Target Recognition and Regulatory Functions
- (2009) David P. Bartel CELL
- Origins and Mechanisms of miRNAs and siRNAs
- (2009) Richard W. Carthew et al. CELL
- Where's the glass? Biomarkers, molecular clocks, and microRNAs suggest a 200-Myr missing Precambrian fossil record of siliceous sponge spicules
- (2009) E. A. SPERLING et al. Geobiology
- Small silencing RNAs: an expanding universe
- (2009) Megha Ghildiyal et al. NATURE REVIEWS GENETICS
- A distinct class of small RNAs arises from pre-miRNA–proximal regions in a simple chordate
- (2009) Weiyang Shi et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
- (2008) Andrew Grimson et al. NATURE
- The birth and death of microRNA genes in Drosophila
- (2008) Jian Lu et al. NATURE GENETICS
- MicroRNAs and the advent of vertebrate morphological complexity
- (2008) A. M. Heimberg et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolution of Arabidopsis thaliana microRNAs from random sequences
- (2008) F. Fenselau de Felippes et al. RNA
- Dual coding of siRNAs and miRNAs by plant transposable elements
- (2008) J. Piriyapongsa et al. RNA
- Widespread Translational Inhibition by Plant miRNAs and siRNAs
- (2008) P. Brodersen et al. SCIENCE
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started