High-throughput SNP genotyping of modern and wild emmer wheat for yield and root morphology using a combined association and linkage analysis

A large-scale chromosome-specific SNP discovery guideline

(2016) Bala Ani Akpinar et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Prioritizing quantitative trait loci for root system architecture in tetraploid wheat

(2016) Marco Maccaferri et al.   JOURNAL OF EXPERIMENTAL BOTANY

Mapping of Ppd-B1, a Major Candidate Gene for Late Heading on Wild Emmer Chromosome Arm 2BS and Assessment of Its Interactions with Early Heading QTLs on 3AL

(2016) Wei Zhou et al.   PLoS One

A transcription factor hierarchy defines an environmental stress response network

(2016) L. Song et al.   SCIENCE

The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements

(2015) Bala Ani Akpinar et al.   BMC GENOMICS

Association mapping of North American spring wheat breeding germplasm reveals loci conferring resistance to Ug99 and other African stem rust races

(2015) P. Bajgain et al.   BMC PLANT BIOLOGY

Joint-multiple family linkage analysis predicts within-family variation better than single-family analysis of the maize nested association mapping population

(2015) F Ogut et al.   HEREDITY

Genetic linkage analysis in the age of whole-genome sequencing

(2015) Jurg Ott et al.   NATURE REVIEWS GENETICS

A multiparental cross population for mapping QTL for agronomic traits in durum wheat (Triticum turgidumssp.durum)

(2015) Sara Giulia Milner et al.   PLANT BIOTECHNOLOGY JOURNAL

High-density SNP genotyping array for hexaploid wheat and its secondary and tertiary gene pool

(2015) Mark O. Winfield et al.   PLANT BIOTECHNOLOGY JOURNAL

Molecular organization and comparative analysis of chromosome 5B of the wild wheat ancestor Triticum dicoccoides

(2015) Bala Ani Akpinar et al.   Scientific Reports

From Genetics to Functional Genomics: Improvement in Drought Signaling and Tolerance in Wheat

(2015) Hikmet Budak et al.   Frontiers in Plant Science

Wheat in the Mediterranean revisited – tetraploid wheat landraces assessed with elite bread wheat Single Nucleotide Polymorphism markers

(2014) Hugo R Oliveira et al.   BMC GENETICS

Next-generation sequencing of flow-sorted wheat chromosome 5D reveals lineage-specific translocations and widespread gene duplications

(2014) Stuart J Lucas et al.   BMC GENOMICS

A consensus framework map of durum wheat (Triticum durum Desf.) suitable for linkage disequilibrium analysis and genome-wide association mapping

(2014) Marco Maccaferri et al.   BMC GENOMICS

Linkage Disequilibrium with Linkage Analysis of Multiline Crosses Reveals Different Multiallelic QTL for Hybrid Performance in the Flint and Dent Heterotic Groups of Maize

(2014) Héloïse Giraud et al.   GENETICS

Association mapping for root architectural traits in durum wheat seedlings as related to agronomic performance

(2014) Maria Angela Canè et al.   MOLECULAR BREEDING

Sequencing chromosome 5D ofAegilops tauschiiand comparison with its allopolyploid descendant bread wheat (Triticum aestivum)

(2014) Bala A. Akpinar et al.   PLANT BIOTECHNOLOGY JOURNAL

A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding

(2014) Marco Maccaferri et al.   PLANT BIOTECHNOLOGY JOURNAL

Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array

(2014) Shichen Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

(2014) et al.   SCIENCE

A meta-analysis of crop yield under climate change and adaptation

(2014) A. J. Challinor et al.   Nature Climate Change

Identification of quantitative trait locus for abscisic acid responsiveness on chromosome 5A and association with dehydration tolerance in common wheat seedlings

(2013) Julio C.M. Iehisa et al.   JOURNAL OF PLANT PHYSIOLOGY

Sequence-based SNP genotyping in durum wheat

(2013) Remco M.P. van Poecke et al.   PLANT BIOTECHNOLOGY JOURNAL

Proteome changes in wild and modern wheat leaves upon drought stress by two-dimensional electrophoresis and nanoLC-ESI–MS/MS

(2013) Hikmet Budak et al.   PLANT MOLECULAR BIOLOGY

Introgression of Novel Traits from a Wild Wheat Relative Improves Drought Adaptation in Wheat

(2013) D. F. Placido et al.   PLANT PHYSIOLOGY

Drought Tolerance in Modern and Wild Wheat

(2013) Hikmet Budak et al.   TheScientificWorldJOURNAL

Genomics Approaches for Crop Improvement against Abiotic Stress

(2013) Bala Anı Akpınar et al.   TheScientificWorldJOURNAL

MapDisto: fast and efficient computation of genetic linkage maps

(2012) Mathias Lorieux   MOLECULAR BREEDING

Analysis of the bread wheat genome using whole-genome shotgun sequencing

(2012) Rachel Brenchley et al.   NATURE

Shrinkage Estimation of the Realized Relationship Matrix

(2012) Jeffrey B. Endelman et al.   G3-Genes Genomes Genetics

TMPIT1 from wild emmer wheat: First characterisation of a stress-inducible integral membrane protein

(2011) Stuart Lucas et al.   GENE

Any trait or trait-related allele can confer drought tolerance: just design the right drought scenario

(2011) F. Tardieu   JOURNAL OF EXPERIMENTAL BOTANY

The drought response displayed by a DRE-binding protein from Triticum dicoccoides

(2011) Stuart Lucas et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

High-throughput SNP discovery and genotyping in durum wheat (Triticum durum Desf.)

(2011) Daniele Trebbi et al.   THEORETICAL AND APPLIED GENETICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Transcriptome pathways unique to dehydration tolerant relatives of modern wheat

(2009) Neslihan Z. Ergen et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

High-throughput single nucleotide polymorphism genotyping in wheat (Triticumspp.)

(2009) Aurélie Bérard et al.   PLANT BIOTECHNOLOGY JOURNAL

Genetic Properties of the Maize Nested Association Mapping Population

(2009) M. D. McMullen et al.   SCIENCE

Sequencing over 13 000 expressed sequence tags from six subtractive cDNA libraries of wild and modern wheats following slow drought stress

(2008) NESLIHAN Z. ERGEN et al.   PLANT CELL AND ENVIRONMENT