Increasing the reach of forensic genetics with massively parallel sequencing

FDSTools: A software package for analysis of massively parallel sequencing data with the ability to recognise and correct STR stutter and other PCR or sequencing noise

(2017) Jerry Hoogenboom et al.   Forensic Science International-Genetics

Flanking region variation of ForenSeq™ DNA Signature Prep Kit STR and SNP loci in Yavapai Native Americans

(2017) Frank R. Wendt et al.   Forensic Science International-Genetics

STRait Razor v2s: Advancing sequence-based STR allele reporting and beyond to other marker systems

(2017) Jonathan L. King et al.   Forensic Science International-Genetics

Global genetic variation of select opiate metabolism genes in self-reported healthy individuals

(2017) F R Wendt et al.   PHARMACOGENOMICS JOURNAL

ISO 17025 validation of a next-generation sequencing assay for relationship testing

(2016) Anders Buchard et al.   ELECTROPHORESIS

Developmental validation of the PowerPlex® Fusion 6C System

(2016) Martin G. Ensenberger et al.   Forensic Science International-Genetics

Evaluation of the Illumina ® Beta Version ForenSeq™ DNA Signature Prep Kit for use in genetic profiling

(2016) Jennifer D. Churchill et al.   Forensic Science International-Genetics

Massively parallel sequencing of 68 insertion/deletion markers identifies novel microhaplotypes for utility in human identity testing

(2016) Frank R. Wendt et al.   Forensic Science International-Genetics

Massively parallel sequencing of 17 commonly used forensic autosomal STRs and amelogenin with small amplicons

(2016) Eun Hye Kim et al.   Forensic Science International-Genetics

Sequence variation of 22 autosomal STR loci detected by next generation sequencing

(2016) Katherine Butler Gettings et al.   Forensic Science International-Genetics

Introduction of the Python script STRinNGS for analysis of STR regions in FASTQ or BAM files and expansion of the Danish STR sequence database to 11 STRs

(2016) Susanne L. Friis et al.   Forensic Science International-Genetics

Characterization of genetic sequence variation of 58 STR loci in four major population groups

(2016) Nicole M.M. Novroski et al.   Forensic Science International-Genetics

Prediction of CYP2D6 phenotype from genotype across world populations

(2016) Andrea Gaedigk et al.   GENETICS IN MEDICINE

Glucose-6-Phosphate Dehydrogenase Deficiency

(2016) Lucio Luzzatto et al.   HEMATOLOGY-ONCOLOGY CLINICS OF NORTH AMERICA

Effects of the Ion PGM™ Hi-Q™ sequencing chemistry on sequence data quality

(2016) Jennifer D. Churchill et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

Case report: on the use of the HID-Ion AmpliSeq™ Ancestry Panel in a real forensic case

(2016) C. Hollard et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

Expansion of Microbial Forensics

(2016) Sarah E. Schmedes et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Next-Generation Sequencing of the Bacterial 16S rRNA Gene for Forensic Soil Comparison: A Feasibility Study

(2016) Ellen M. Jesmok et al.   JOURNAL OF FORENSIC SCIENCES

Revised Estimates for the Number of Human and Bacteria Cells in the Body

(2016) Ron Sender et al.   PLOS BIOLOGY

Broad-based molecular autopsy: a potential tool to investigate the involvement of subtle cardiac conditions in sudden unexpected death in infancy and early childhood

(2015) Montserrat Santori et al.   ARCHIVES OF DISEASE IN CHILDHOOD

Underlying Data for Sequencing the Mitochondrial Genome with the Massively Parallel Sequencing Platform Ion Torrent™ PGM™

(2015) Seung Bum Seo et al.   BMC GENOMICS

Blind study evaluation illustrates utility of the Ion PGM™ system for use in human identity DNA typing

(2015) Jennifer D. Churchill et al.   CROATIAN MEDICAL JOURNAL

Second-generation sequencing of forensic STRs using the Ion Torrent™ HID STR 10-plex and the Ion PGM™

(2015) Sarah L. Fordyce et al.   Forensic Science International-Genetics

Inter-laboratory evaluation of SNP-based forensic identification by massively parallel sequencing using the Ion PGM™

(2015) M. Eduardoff et al.   Forensic Science International-Genetics

An evaluation of the PowerSeq™ Auto System: A multiplex short tandem repeat marker kit compatible with massively parallel sequencing

(2015) Xiangpei Zeng et al.   Forensic Science International-Genetics

Sequencing the hypervariable regions of human mitochondrial DNA using massively parallel sequencing: Enhanced data acquisition for DNA samples encountered in forensic testing

(2015) Carey Davis et al.   Legal Medicine

Increased prevalence of functional minor allele variants of drug metabolizing CYP2B6 and CYP2D6 genes in Roma population samples

(2015) Agnes Weber et al.   Pharmacological Reports

Sequencing the hypervariable regions of human mitochondrial DNA using massively parallel sequencing: Enhanced data acquisition for DNA samples encountered in forensic testing

(2015) Carey Davis et al.   Legal Medicine

High-quality and high-throughput massively parallel sequencing of the human mitochondrial genome using the Illumina MiSeq

(2014) Jonathan L. King et al.   Forensic Science International-Genetics

A simple identification method for vaginal secretions using relative quantification of Lactobacillus DNA

(2014) Masanori Doi et al.   Forensic Science International-Genetics

Massively parallel pyrosequencing of the mitochondrial genome with the 454 methodology in forensic genetics

(2014) Martin Mikkelsen et al.   Forensic Science International-Genetics

Internal validation of the GlobalFiler™ Express PCR Amplification Kit for the direct amplification of reference DNA samples on a high-throughput automated workflow

(2014) Shahida Flores et al.   Forensic Science International-Genetics

Molecular evolution in court: analysis of a large hepatitis C virus outbreak from an evolving source

(2013) Fernando González-Candelas et al.   BMC BIOLOGY

Evaluation of next generation mtGenome sequencing using the Ion Torrent Personal Genome Machine (PGM)

(2013) Walther Parson et al.   Forensic Science International-Genetics

My-Forensic-Loci-queries (MyFLq) framework for analysis of forensic STR data generated by massive parallel sequencing

(2013) Christophe Van Neste et al.   Forensic Science International-Genetics

Finding the needle in the haystack: Differentiating “identical” twins in paternity testing and forensics by ultra-deep next generation sequencing

(2013) Jacqueline Weber-Lehmann et al.   Forensic Science International-Genetics

The potential use of bacterial community succession in forensics as described by high throughput metagenomic sequencing

(2013) Jennifer L. Pechal et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

Body fluid identification by integrated analysis of DNA methylation and body fluid-specific microbial DNA

(2013) Ajin Choi et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

Updating benchtop sequencing performance comparison

(2013) Sebastian Jünemann et al.   NATURE BIOTECHNOLOGY

Prediction of Codeine Toxicity in Infants and Their Mothers Using a Novel Combination of Maternal Genetic Markers

(2012) J Sistonen et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

Progress in Ion Torrent semiconductor chip based sequencing

(2012) Barry Merriman et al.   ELECTROPHORESIS

Comparative evaluation of alternative batteries of genetic markers to complement autosomal STRs in kinship investigations: autosomal indels vs. X-chromosome STRs

(2012) Cláudia Gomes et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

Comparison of bacterial DNA profiles of footwear insoles and soles of feet for the forensic discrimination of footwear owners

(2012) Haruhisa Goga   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

Detection of bacterial 16S ribosomal RNA genes for forensic identification of vaginal fluid

(2012) Tomoko Akutsu et al.   Legal Medicine

A framework for human microbiome research

(2012)   NATURE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Genomic diversity of 2010 Haitian cholera outbreak strains

(2012) N. A. Hasan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011

(2012) Y. H. Grad et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In Vitro Assessment of the Allelic Variants of Cytochrome P450

(2011) Masahiro Hiratsuka   Drug Metabolism and Pharmacokinetics

Molecular autopsy in young sudden cardiac death victims with suspected cardiomyopathy

(2011) M.K. Larsen et al.   FORENSIC SCIENCE INTERNATIONAL

Bacillus anthracis comparative genome analysis in support of the Amerithrax investigation

(2011) D. A. Rasko et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population Genetics of Vibrio cholerae from Nepal in 2010: Evidence on the Origin of the Haitian Outbreak

(2011) R. S. Hendriksen et al.   mBio

Pharmacogenetics in medico-legal context

(2010) A. Sajantila et al.   FORENSIC SCIENCE INTERNATIONAL

The use of bacteria for the identification of vaginal secretions

(2010) Rachel I. Fleming et al.   Forensic Science International-Genetics

The Origin of the Haitian Cholera Outbreak Strain

(2010) Chen-Shan Chin et al.   NEW ENGLAND JOURNAL OF MEDICINE

The past, present and future of pharmacoepigenomics

(2010) Magnus Ingelman-Sundberg et al.   PHARMACOGENOMICS

Medical malpractice as reflected by the forensic evaluation of 4450 autopsies

(2009) Burkhard Madea et al.   FORENSIC SCIENCE INTERNATIONAL

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

Topographical and Temporal Diversity of the Human Skin Microbiome

(2009) E. A. Grice et al.   SCIENCE

Forensically relevant SNP classes

(2008) Bruce Budowle et al.   BIOTECHNIQUES

Clinical Pharmacogenetics and Potential Application in Personalized Medicine

(2008) Shu-Feng Zhou et al.   CURRENT DRUG METABOLISM

A novel method for the identification of saliva by detecting oral streptococci using PCR

(2008) Hiroaki Nakanishi et al.   FORENSIC SCIENCE INTERNATIONAL

Next-generation DNA sequencing

(2008) Jay Shendure et al.   NATURE BIOTECHNOLOGY

The influence of sex, handedness, and washing on the diversity of hand surface bacteria

(2008) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA