Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011
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Title
Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011
Authors
Keywords
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Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 109, Issue 8, Pages 3065-3070
Publisher
Proceedings of the National Academy of Sciences
Online
2012-02-07
DOI
10.1073/pnas.1121491109
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Note: Only part of the references are listed.- Presence of Enterohemorrhagic Escherichia coli ST678/O104:H4 in France Prior to 2011
- (2011) Stefan Monecke et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC)
- (2011) Elzbieta Brzuszkiewicz et al. ARCHIVES OF MICROBIOLOGY
- Escherichia coli O104:H4 south-west France, June 2011
- (2011) Patricia Mariani-Kurkdjian et al. LANCET INFECTIOUS DISEASES
- Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study
- (2011) Martina Bielaszewska et al. LANCET INFECTIOUS DISEASES
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
- (2011) K. Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- Origins of theE. coliStrain Causing an Outbreak of Hemolytic–Uremic Syndrome in Germany
- (2011) David A. Rasko et al. NEW ENGLAND JOURNAL OF MEDICINE
- Open-Source Genomic Analysis of Shiga-Toxin–ProducingE. coliO104:H4
- (2011) Holger Rohde et al. NEW ENGLAND JOURNAL OF MEDICINE
- Epidemic Profile of Shiga-Toxin–ProducingEscherichia coliO104:H4 Outbreak in Germany
- (2011) Christina Frank et al. NEW ENGLAND JOURNAL OF MEDICINE
- Whole-Genome Sequencing and Social-Network Analysis of a Tuberculosis Outbreak
- (2011) Jennifer L. Gardy et al. NEW ENGLAND JOURNAL OF MEDICINE
- Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology
- (2011) Alexander Mellmann et al. PLoS One
- Bacillus anthracis comparative genome analysis in support of the Amerithrax investigation
- (2011) D. A. Rasko et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
- (2010) Aaron E. Darling et al. PLoS One
- Evolution of MRSA During Hospital Transmission and Intercontinental Spread
- (2010) S. R. Harris et al. SCIENCE
- Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths
- (2009) Marie Touchon et al. PLoS Genetics
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