Intronic cleavage and polyadenylation regulates gene expression during DNA damage response through U1 snRNA

Plasma membrane gp96 enhances invasion and metastatic potential of liver cancer via regulation of uPAR

(2015) Junwei Hou et al.   Molecular Oncology

PARN deadenylase is involved in miRNA-dependent degradation of TP53 mRNA in mammalian cells

(2015) Xiaokan Zhang et al.   NUCLEIC ACIDS RESEARCH

Systematic Profiling of Poly(A)+ Transcripts Modulated by Core 3’ End Processing and Splicing Factors Reveals Regulatory Rules of Alternative Cleavage and Polyadenylation

(2015) Wencheng Li et al.   PLoS Genetics

Functional genomics identifies a requirement of pre-mRNA splicing factors for sister chromatid cohesion

(2014) S. Sundaramoorthy et al.   EMBO JOURNAL

E2F1 regulates p53R2 gene expression in p53-deficient cells

(2014) Jun-Juan Qi et al.   MOLECULAR AND CELLULAR BIOCHEMISTRY

Post-Transcriptional Regulation of DNA Damage-Responsive Gene Expression

(2013) Bruce C. McKay   ANTIOXIDANTS & REDOX SIGNALING

DUSP6 regulates drug sensitivity by modulating DNA damage response

(2013) T V Bagnyukova et al.   BRITISH JOURNAL OF CANCER

NOTCH signaling in Sertoli cells regulates gonocyte fate

(2013) Thomas Xavier Garcia et al.   CELL CYCLE

UV damage regulates alternative polyadenylation of the RPB2 gene in yeast

(2013) Lijian Yu et al.   NUCLEIC ACIDS RESEARCH

Positive and negative feedback loops in the p53 and mRNA 3′ processing pathways

(2013) Emral Devany et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The impact of post-transcriptional regulation in the p53 network

(2012) J. A. Freeman et al.   Briefings in Functional Genomics

U1 snRNP Determines mRNA Length and Regulates Isoform Expression

(2012) Michael G. Berg et al.   CELL

Analysis of alternative cleavage and polyadenylation by 3′ region extraction and deep sequencing

(2012) Mainul Hoque et al.   NATURE METHODS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The p21 and PCNA partnership: A new twist for an old plot

(2011) Carol Prives et al.   CELL CYCLE

The anti-tumor drug E7107 reveals an essential role for SF3b in remodeling U2 snRNP to expose the branch point-binding region

(2011) E. G. Folco et al.   GENES & DEVELOPMENT

Essential role for the interaction between hnRNP H/F and a G quadruplex in maintaining p53 pre-mRNA 3'-end processing and function during DNA damage

(2011) A. Decorsiere et al.   GENES & DEVELOPMENT

p53 inhibits mRNA 3′ processing through its interaction with the CstF/BARD1 complex

(2011) F I Nazeer et al.   ONCOGENE

Signals for pre-mRNA cleavage and polyadenylation

(2011) Bin Tian et al.   Wiley Interdisciplinary Reviews-RNA

Protective mechanisms of p53-p21-pRb proteins against DNA damage-induced cell death

(2010) Elizabeth Garner et al.   CELL CYCLE

Ephrins and Eph receptors in stem cells and cancer

(2010) Maria Genander et al.   CURRENT OPINION IN CELL BIOLOGY

Nuclear deadenylation/polyadenylation factors regulate 3′ processing in response to DNA damage

(2010) Murat A Cevher et al.   EMBO JOURNAL

U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation

(2010) Daisuke Kaida et al.   NATURE

Connections between 3′-end processing and DNA damage response

(2010) Murat A. Cevher et al.   Wiley Interdisciplinary Reviews-RNA

An active role for splicing in 3′-end formation

(2010) Harold G. Martinson   Wiley Interdisciplinary Reviews-RNA

Identification of Signaling Systems in Proliferating and Involuting Phase Infantile Hemangiomas by Genome-Wide Transcriptional Profiling

(2009) Monica L. Calicchio et al.   AMERICAN JOURNAL OF PATHOLOGY

Molecular Architecture of the Human Pre-mRNA 3′ Processing Complex

(2009) Yongsheng Shi et al.   MOLECULAR CELL

Progressive lengthening of 3' untranslated regions of mRNAs by alternative polyadenylation during mouse embryonic development

(2009) Z. Ji et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Alternative Polyadenylation: A Twist on mRNA 3′ End Formation

(2008) Carol S. Lutz   ACS Chemical Biology

Syndromic thrombocytopenia and predisposition to acute myelogenous leukemia caused by constitutional microdeletions on chromosome 21q

(2008) M. Shinawi et al.   BLOOD

Multiple Mechanisms Contribute to Inhibit Transcription in Response to DNA Damage

(2008) George F. Heine et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Alternative isoform regulation in human tissue transcriptomes

(2008) Eric T. Wang et al.   NATURE

Genome-Wide Analysis of MEF2 Transcriptional Program Reveals Synaptic Target Genes and Neuronal Activity-Dependent Polyadenylation Site Selection

(2008) Steven W. Flavell et al.   NEURON

The 3' processing factor CstF functions in the DNA repair response

(2008) N. Mirkin et al.   NUCLEIC ACIDS RESEARCH

Proliferating Cells Express mRNAs with Shortened 3' Untranslated Regions and Fewer MicroRNA Target Sites

(2008) R. Sandberg et al.   SCIENCE

RNA Exosome Depletion Reveals Transcription Upstream of Active Human Promoters

(2008) Pascal Preker et al.   SCIENCE