Epithelial, metabolic and innate immunity transcriptomic signatures differentiating the rumen from other sheep and mammalian gastrointestinal tract tissues

Utilization of digital differential display to identify differentially expressed genes related to rumen development

(2015) Daichi Kato et al.   ANIMAL SCIENCE JOURNAL

Ruminal Transcriptomic Analysis of Grass-Fed and Grain-Fed Angus Beef Cattle

(2015) Yaokun Li et al.   PLoS One

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

GenCLiP 2.0: a web server for functional clustering of genes and construction of molecular networks based on free terms

(2014) Jia-Hong Wang et al.   BIOINFORMATICS

High S100A8 and S100A12 protein expression is a favorable prognostic factor for survival of oropharyngeal squamous cell carcinoma

(2014) Sonja Funk et al.   INTERNATIONAL JOURNAL OF CANCER

Monocarboxylate Transporter 1 Deficiency and Ketone Utilization

(2014) Peter M. van Hasselt et al.   NEW ENGLAND JOURNAL OF MEDICINE

The Role of SGLT1 and GLUT2 in Intestinal Glucose Transport and Sensing

(2014) Pia V. Röder et al.   PLoS One

The sheep genome illuminates biology of the rumen and lipid metabolism

(2014) Y. Jiang et al.   SCIENCE

Prolactin-Induced Protein Is Required for Cell Cycle Progression in Breast Cancer

(2014) Ali Naderi et al.   NEOPLASIA

Comparative study of RNA-seq- and Microarray-derived coexpression networks in Arabidopsis thaliana

(2013) Federico M. Giorgi et al.   BIOINFORMATICS

Netherton syndrome: skin inflammation and allergy by loss of protease inhibition

(2013) Alain Hovnanian   CELL AND TISSUE RESEARCH

Precision mapping of the human O-GalNAc glycoproteome through SimpleCell technology

(2013) Catharina Steentoft et al.   EMBO JOURNAL

New insights into the molecular mechanism of intestinal fatty acid absorption

(2013) Tony Y. Wang et al.   EUROPEAN JOURNAL OF CLINICAL INVESTIGATION

Gastric and Colonic Zinc Transporter ZIP11 (Slc39a11) in Mice Responds to Dietary Zinc and Exhibits Nuclear Localization

(2013) Alyssa B. Martin et al.   JOURNAL OF NUTRITION

The heteromeric organic solute transporter, OSTα–OSTβ/SLC51: A transporter for steroid-derived molecules

(2013) Nazzareno Ballatori et al.   MOLECULAR ASPECTS OF MEDICINE

S100A Proteins as Molecular Targets in the Ocular Surface Inflammatory Diseases

(2013) Louis Tong et al.   Ocular Surface

Epithelia of the ovine and bovine forestomach express basolateral maxi-anion channels permeable to the anions of short-chain fatty acids

(2013) Maria I. Georgi et al.   PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY

Peculiarities of Enhancing Resistant Starch in Ruminants Using Chemical Methods: Opportunities and Challenges

(2013) Kathrin Deckardt et al.   Nutrients

A gene expression atlas of the domestic pig

(2012) Tom C Freeman et al.   BMC BIOLOGY

Beyond differential expression: the quest for causal mutations and effector molecules

(2012) Nicholas J Hudson et al.   BMC GENOMICS

Genes associated with MUC5AC expression in small airway epithelium of human smokers and non-smokers

(2012) Guoqing Wang et al.   BMC Medical Genomics

The human epidermal differentiation complex: cornified envelope precursors, S100 proteins and the ‘fused genes’ family

(2012) Magdalini Kypriotou et al.   EXPERIMENTAL DERMATOLOGY

Molecular cloning and characterisation of ovine dual oxidase 2

(2012) M.S. Lees et al.   GENE

Analyses of pig genomes provide insight into porcine demography and evolution

(2012) Martien A. M. Groenen et al.   NATURE

Role of the Gut in Lipid Homeostasis

(2012) Nada A. Abumrad et al.   PHYSIOLOGICAL REVIEWS

Bovine rumen epithelium undergoes rapid structural adaptations during grain-induced subacute ruminal acidosis

(2011) Michael A. Steele et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

Metabolism of microbial nitrogen in ruminants with special reference to nucleic acids

(2011) Tsutomu FUJIHARA et al.   ANIMAL SCIENCE JOURNAL

Annotation of sheep keratin intermediate filament genes and their patterns of expression

(2011) Zhidong Yu et al.   EXPERIMENTAL DERMATOLOGY

RUMINANT NUTRITION SYMPOSIUM: Productivity, digestion, and health responses to hindgut acidosis in ruminants1

(2011) T. F. Gressley et al.   JOURNAL OF ANIMAL SCIENCE

Solute Carrier Family 26 Member a2 (Slc26a2) Protein Functions as an Electroneutral SO42−/OH−/Cl−Exchanger Regulated by Extracellular Cl−

(2011) Ehud Ohana et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Short communication: Effects of dietary nitrogen concentration on messenger RNA expression and protein abundance of urea transporter-B and aquaporins in ruminal papillae from lactating Holstein cows

(2011) B.A. Røjen et al.   JOURNAL OF DAIRY SCIENCE

Rumen epithelial adaptation to ruminal acidosis in lactating cattle involves the coordinated expression of insulin-like growth factor-binding proteins and a cholesterolgenic enzyme

(2011) M.A. Steele et al.   JOURNAL OF DAIRY SCIENCE

Rumen epithelial adaptation to high-grain diets involves the coordinated regulation of genes involved in cholesterol homeostasis

(2011) Michael A. Steele et al.   PHYSIOLOGICAL GENOMICS

GLay: community structure analysis of biological networks

(2010) G. Su et al.   BIOINFORMATICS

A nonredundant role for mouse Serpinb3a in the induction of mucus production in asthma

(2010) Umasundari Sivaprasad et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

RUMINANT NUTRITION SYMPOSIUM: Molecular adaptation of ruminal epithelia to highly fermentable diets1

(2010) G. B. Penner et al.   JOURNAL OF ANIMAL SCIENCE

Surprising Substrate Versatility in SLC5A6

(2010) Fernanda Delmondes de Carvalho et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Link between high-affinity adenosine concentrative nucleoside transporter-2 (CNT2) and energy metabolism in intestinal and liver parenchymal cells

(2010) Isabel Huber-Ruano et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Inhibitors of human 20α-hydroxysteroid dehydrogenase (AKR1C1)

(2010) Ossama El-Kabbani et al.   JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY

Bicarbonate-dependent and bicarbonate-independent mechanisms contribute to nondiffusive uptake of acetate in the ruminal epithelium of sheep

(2009) Jörg R. Aschenbach et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Modulation of urea transport across sheep rumen epithelium in vitro by SCFA and CO2

(2009) Khalid Abdoun et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Gene expression in the digestive tissues of ruminants and their relationships with feeding and digestive processes

(2009) E. E. Connor et al.   Animal

PCIT: an R package for weighted gene co-expression networks based on partial correlation and information theory approaches

(2009) N. S. Watson-Haigh et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

(2009) Eran Eden et al.   BMC BIOINFORMATICS

Lethal Acantholytic Epidermolysis Bullosa

(2009) John A. McGrath et al.   DERMATOLOGIC CLINICS

Exploring the human genome with functional maps

(2009) C. Huttenhower et al.   GENOME RESEARCH

BioNumbers—the database of key numbers in molecular and cell biology

(2009) Ron Milo et al.   NUCLEIC ACIDS RESEARCH

Combining partial correlation and an information theory approach to the reversed engineering of gene co-expression networks

(2008) Antonio Reverter et al.   BIOINFORMATICS

Prolactin inducible protein in cancer, fertility and immunoregulation: structure, function and its clinical implications

(2008) Md. I. Hassan et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

BOARD-INVITED REVIEW: Recent advances in biohydrogenation of unsaturated fatty acids within the rumen microbial ecosystem1

(2007) T. C. Jenkins et al.   JOURNAL OF ANIMAL SCIENCE