Long Noncoding RNA and mRNA Expression Profiles in the Thyroid Gland of Two Phenotypically Extreme Pig Breeds Using Ribo-Zero RNA Sequencing

Systematic Identification of Long Noncoding RNAs in Immature and Mature Porcine Testes1

(2016) Maoliang Ran et al.   BIOLOGY OF REPRODUCTION

Analyses of Long Non-Coding RNA and mRNA profiling using RNA sequencing during the pre-implantation phases in pig endometrium

(2016) Yueying Wang et al.   Scientific Reports

LncRNAs in vertebrates: Advances and challenges

(2015) Allison C. Mallory et al.   BIOCHIMIE

De Novo Reconstruction of Adipose Tissue Transcriptomes Reveals Long Non-coding RNA Regulators of Brown Adipocyte Development

(2015) Juan R. Alvarez-Dominguez et al.   Cell Metabolism

Long non-coding RNAs as regulators of the endocrine system

(2015) Marko Knoll et al.   Nature Reviews Endocrinology

NONCODE 2016: an informative and valuable data source of long non-coding RNAs

(2015) Yi Zhao et al.   NUCLEIC ACIDS RESEARCH

ALDB: A Domestic-Animal Long Noncoding RNA Database

(2015) Aimin Li et al.   PLoS One

Identification of Genes Related to Growth and Lipid Deposition from Transcriptome Profiles of Pig Muscle Tissue

(2015) Zhixiu Wang et al.   PLoS One

Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling

(2014) Wei Zhao et al.   BMC GENOMICS

Anoctamin 1 is Apically Expressed on Thyroid Follicular Cells and Contributes to ATP- and Calcium-Activated Iodide Efflux

(2014) Carmela Iosco et al.   CELLULAR PHYSIOLOGY AND BIOCHEMISTRY

Genome-Wide Identification of Long Intergenic Noncoding RNA Genes and Their Potential Association with Domestication in Pigs

(2014) Zhong-Yin Zhou et al.   Genome Biology and Evolution

Evolutionary dynamics and tissue specificity of human long noncoding RNAs in six mammals

(2014) S. Washietl et al.   GENOME RESEARCH

lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs

(2014) Xiu Cheng Quek et al.   NUCLEIC ACIDS RESEARCH

Ensembl 2015

(2014) Fiona Cunningham et al.   NUCLEIC ACIDS RESEARCH

Genome-wide gene expression profiles of thyroid carcinoma: Identification of molecular targets for treatment of thyroid carcinoma

(2014) Dragomira Nikolova et al.   ONCOLOGY REPORTS

Thyroid Hormone Regulation of Metabolism

(2014) Rashmi Mullur et al.   PHYSIOLOGICAL REVIEWS

Association of BTG2, CYR61, ZFP36, and SCD Gene Polymorphisms with Graves' Disease and Ophthalmopathy

(2014) Tereza Planck et al.   THYROID

Expression Profiling Reveals Developmentally Regulated lncRNA Repertoire in the Mouse Male Germline1

(2013) Jianqiang Bao et al.   BIOLOGY OF REPRODUCTION

Identification of novel transcripts and noncoding RNAs in bovine skin by deep next generation sequencing

(2013) Rosemarie Weikard et al.   BMC GENOMICS

lincRNAs: Genomics, Evolution, and Mechanisms

(2013) Igor Ulitsky et al.   CELL

Long Noncoding RNAs: Past, Present, and Future

(2013) J. T. Y. Kung et al.   GENETICS

Comparative analysis of RNA sequencing methods for degraded or low-input samples

(2013) Xian Adiconis et al.   NATURE METHODS

Long non-coding RNAs: new players in cell differentiation and development

(2013) Alessandro Fatica et al.   NATURE REVIEWS GENETICS

Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer

(2013) Zhou Du et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

RefSeq: an update on mammalian reference sequences

(2013) Kim D. Pruitt et al.   NUCLEIC ACIDS RESEARCH

Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

(2013) Liang Sun et al.   NUCLEIC ACIDS RESEARCH

Long Noncoding RNAs May Alter Chromosome's 3D Structure

(2013) E. Pennisi   SCIENCE

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Selenium and the thyroid gland: more good news for clinicians

(2012) Anne Drutel et al.   CLINICAL ENDOCRINOLOGY

Thyroid Regeneration: Characterization of Clear Cells After Partial Thyroidectomy

(2012) Takashi Ozaki et al.   ENDOCRINOLOGY

The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

(2012) T. Derrien et al.   GENOME RESEARCH

Functional coupling of TRPC2 cation channels and the calcium-activated anion channels in rat thyroid cells: Implications for iodide homeostasis

(2012) Tero M. Viitanen et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Control of somatic tissue differentiation by the long non-coding RNA TINCR

(2012) Markus Kretz et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Cis-acting noncoding RNAs: friends and foes

(2012) Sònia Guil et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The sequence and analysis of a Chinese pig genome

(2012) Xiaodong Fang et al.   GigaScience

PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions

(2011) M. F. Lin et al.   BIOINFORMATICS

Developmental patterns in hormone and lipid metabolism of growing Jinhua and Landrace gilts

(2011) Zhi-Guo Miao et al.   CANADIAN JOURNAL OF ANIMAL SCIENCE

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

(2011) M. N. Cabili et al.   GENES & DEVELOPMENT

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

(2011) A. Pauli et al.   GENOME RESEARCH

Gene silencing in X-chromosome inactivation: advances in understanding facultative heterochromatin formation

(2011) Anton Wutz   NATURE REVIEWS GENETICS

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

CTGF is overexpressed in papillary thyroid carcinoma and promotes the growth of papillary thyroid cancer cells

(2011) Lei Cui et al.   TUMOR BIOLOGY

New insights into regulation of lipid metabolism by thyroid hormone

(2011) Xuguang Zhu et al.   Current Opinion in Endocrinology Diabetes and Obesity

DNA Methylation in Thyroid Tumorigenesis

(2011) Josena K. Stephen et al.   Cancers

Long Noncoding RNAs with Enhancer-like Function in Human Cells

(2010) Ulf Andersson Ørom et al.   CELL

Ventricular fibrillation associated with early repolarization in a patient with thyroid storm

(2010) Akira Ueno et al.   JOURNAL OF INTERVENTIONAL CARDIAC ELECTROPHYSIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

(2010) Mitchell Guttman et al.   NATURE BIOTECHNOLOGY

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

Thyrotropin-Releasing Hormone and the Thyroid Hormone Feedback Mechanism

(2009) Maria Izabel Chiamolera et al.   ENDOCRINOLOGY

Expression of IFNα-inducible genes and modulation of HLA-DR and thyroid stimulating hormone receptors in Graves’ disease

(2009) Miao Kuang et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Rab GTPases as coordinators of vesicle traffic

(2009) Harald Stenmark   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Peroxides and Peroxide-Degrading Enzymes in the Thyroid

(2008) Ulrich Schweizer et al.   ANTIOXIDANTS & REDOX SIGNALING

On the importance of selenium and iodine metabolism for thyroid hormone biosynthesis and human health

(2008) Lutz Schomburg et al.   MOLECULAR NUTRITION & FOOD RESEARCH