Ca2+/Cation Antiporters (CaCA): Identification, Characterization and Expression Profiling in Bread Wheat (Triticum aestivum L.)

Genome-wide identification and characterization of Glyceraldehyde-3-phosphate dehydrogenase genes family in wheat (Triticum aestivum)

(2016) Lingfeng Zeng et al.   BMC GENOMICS

Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean

(2016) Fulai Zhou et al.   BMC PLANT BIOLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

CAX-ing a wide net: Cation/H+ transporters in metal remediation and abiotic stress signalling

(2016) J. K. Pittman et al.   PLANT BIOLOGY

Molecular Characterization of Vitellogenin and Vitellogenin Receptor of Bemisia tabaci

(2016) Santosh Kumar Upadhyay et al.   PLoS One

Phylogenetic analysis and protein structure modelling identifies distinct Ca2+/Cation antiporters and conservation of gene family structure within Arabidopsis and rice species

(2016) Jon K. Pittman et al.   Rice

Genomic Dissection and Expression Profiling Revealed Functional Divergence in Triticum aestivum Leucine Rich Repeat Receptor Like Kinases (TaLRRKs)

(2016) Shumayla et al.   Frontiers in Plant Science

Molecular Characterization and Global Expression Analysis of Lectin Receptor Kinases in Bread Wheat (Triticum aestivum)

(2016) Shumayla et al.   PLoS One

Expression partitioning of homeologs and tandem duplications contribute to salt tolerance in wheat (Triticum aestivum L.)

(2016) Yumei Zhang et al.   Scientific Reports

IBS: an illustrator for the presentation and visualization of biological sequences: Fig. 1.

(2015) Wenzhong Liu et al.   BIOINFORMATICS

Temporal transcriptome profiling reveals expression partitioning of homeologous genes contributing to heat and drought acclimation in wheat (Triticum aestivum L.)

(2015) Zhenshan Liu et al.   BMC PLANT BIOLOGY

Ca2+-regulated and diurnal rhythm-regulated Na+/Ca2+exchanger AtNCL affects flowering time and auxin signalling inArabidopsis

(2015) Penghui Li et al.   PLANT CELL AND ENVIRONMENT

Genome-wide investigation and expression analysis of Sodium/Calcium exchanger gene family in rice and Arabidopsis

(2015) Anil Kumar Singh et al.   Rice

Deep transcriptome sequencing provides new insights into the structural and functional organization of the wheat genome

(2015) Lise Pingault et al.   GENOME BIOLOGY

GSDS 2.0: an upgraded gene feature visualization server

(2014) Bo Hu et al.   BIOINFORMATICS

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

Large-scale transcriptome comparison reveals distinct gene activations in wheat responding to stripe rust and powdery mildew

(2014) Hong Zhang et al.   BMC GENOMICS

EFFECTS OF SALINITY STRESS ON PHYSIOLOGICAL PERFORMANCE OF VARIOUS WHEAT AND BARLEY CULTIVARS

(2014) Mohammad Hossein Izadi et al.   JOURNAL OF PLANT NUTRITION

CDD: NCBI's conserved domain database

(2014) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

SMART: recent updates, new developments and status in 2015

(2014) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

siRNA Machinery in Whitefly (Bemisia tabaci)

(2014) Santosh Kumar Upadhyay et al.   PLoS One

Expression and functional analysis of putative vacuolar Ca2+-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars

(2014) Nana Yamada et al.   PROTOPLASMA

Ancient hybridizations among the ancestral genomes of bread wheat

(2014) T. Marcussen et al.   SCIENCE

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

(2014) et al.   SCIENCE

Structural and functional partitioning of bread wheat chromosome 3B

(2014) F. Choulet et al.   SCIENCE

Protter: interactive protein feature visualization and integration with experimental proteomic data

(2013) Ulrich Omasits et al.   BIOINFORMATICS

Phylogeny and a structural model of plant MHX transporters

(2013) Rachel Gaash et al.   BMC PLANT BIOLOGY

Gene duplication as a major force in evolution

(2013) SANTOSHKUMAR MAGADUM et al.   JOURNAL OF GENETICS

The SLC8 gene family of sodium–calcium exchangers (NCX) – Structure, function, and regulation in health and disease

(2013) Daniel Khananshvili   MOLECULAR ASPECTS OF MEDICINE

Structural basis for alternating access of a eukaryotic calcium/proton exchanger

(2013) Andrew B. Waight et al.   NATURE

Draft genome of the wheat A-genome progenitor Triticum urartu

(2013) Hong-Qing Ling et al.   NATURE

Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation

(2013) Jizeng Jia et al.   NATURE

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Sodium-calcium exchangers (NCX): molecular hallmarks underlying the tissue-specific and systemic functions

(2013) Daniel Khananshvili   PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY

Crystal structure of Ca2+/H+ antiporter protein YfkE reveals the mechanisms of Ca2+ efflux and its pH regulation

(2013) M. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural Basis for the Counter-Transport Mechanism of a H+/Ca2+ Exchanger

(2013) T. Nishizawa et al.   SCIENCE

Effects of drought and high temperature stress on synthetic hexaploid wheat

(2012) Gautam P. Pradhan et al.   FUNCTIONAL PLANT BIOLOGY

A Na+/Ca2+Exchanger-like Protein (AtNCL) Involved in Salt Stress inArabidopsis

(2012) Peng Wang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MIPS PlantsDB: a database framework for comparative plant genome research

(2012) Thomas Nussbaumer et al.   NUCLEIC ACIDS RESEARCH

In Silico Analysis of Expression Data for Identification of Genes Involved in Spatial Accumulation of Calcium in Developing Seeds of Rice

(2012) Anshita Goel et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Genome-wide analysis of lectin receptor-like kinase family from Arabidopsis and rice

(2012) Neha Vaid et al.   PLANT MOLECULAR BIOLOGY

Structural Insight into the Ion-Exchange Mechanism of the Sodium/Calcium Exchanger

(2012) J. Liao et al.   SCIENCE

Protein Phylogenetic Analysis of Ca2+/cation Antiporters and Insights into their Evolution in Plants

(2012) Laura Emery et al.   Frontiers in Plant Science

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

The ins and outs of cellular Ca2+ transport

(2011) Edgar P Spalding et al.   CURRENT OPINION IN PLANT BIOLOGY

Independent and Combined Effects of High Temperature and Drought Stress During Grain Filling on Plant Yield and Chloroplast EF-Tu Expression in Spring Wheat

(2011) P. V. V. Prasad et al.   JOURNAL OF AGRONOMY AND CROP SCIENCE

Establishment of an in planta magnesium monitoring system using CAX3 promoter-luciferase in Arabidopsis

(2011) Takehiro Kamiya et al.   JOURNAL OF EXPERIMENTAL BOTANY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Plant cation/H+ exchangers (CAXs): biological functions and genetic manipulations

(2011) M. Manohar et al.   PLANT BIOLOGY

Cell-Specific Vacuolar Calcium Storage Mediated byCAX1Regulates Apoplastic Calcium Concentration, Gas Exchange, and Plant Productivity inArabidopsis

(2011) Simon J. Conn et al.   PLANT CELL

Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content

(2011) Pilar Hernandez et al.   PLANT JOURNAL

Expression of a Suaeda salsa Vacuolar H+/Ca2+ Transporter Gene in Arabidopsis Contributes to Physiological Changes in Salinity

(2011) Ning Han et al.   PLANT MOLECULAR BIOLOGY REPORTER

The Language of Calcium Signaling

(2010) Antony N. Dodd et al.   Annual Review of Plant Biology

Zebrafish (Danio rerio) Endomembrane Antiporter Similar to a Yeast Cation/H+Transporter Is Required for Neural Crest Development

(2010) Murli Manohar et al.   BIOCHEMISTRY

A modern circadian clock in the common angiosperm ancestor of monocots and eudicots

(2010) C Robertson McClung   BMC BIOLOGY

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

The expression of the open reading frame of Arabidopsis CAX1, but not its cDNA, confers metal tolerance in yeast

(2010) T. Shigaki et al.   PLANT BIOLOGY

Functional Studies of Split Arabidopsis Ca2+/H+Exchangers

(2009) Jian Zhao et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Root development under metal stress inArabidopsis thalianarequires the H+/cation antiporter CAX4

(2009) Hui Mei et al.   NEW PHYTOLOGIST

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

Comparative analysis of CAX2-like cation transporters indicates functional and regulatory diversity

(2008) Clare Edmond et al.   BIOCHEMICAL JOURNAL

Gene Structure Evolution of the Na+-Ca2+ Exchanger (NCX) Family

(2008) Caly On et al.   BMC EVOLUTIONARY BIOLOGY

A Cation-regulated and Proton Gradient-dependent Cation Transporter fromChlamydomonas reinhardtiiHas a Role in Calcium and Sodium Homeostasis

(2008) Jon K. Pittman et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Overexpression of AtMHX in tobacco causes increased sensitivity to Mg2+, Zn2+, and Cd2+ ions, induction of V-ATPase expression, and a reduction in plant size

(2008) Irina Berezin et al.   PLANT CELL REPORTS

AtCCX3 Is an Arabidopsis Endomembrane H+-Dependent K+ Transporter

(2008) J. Morris et al.   PLANT PHYSIOLOGY