Transcriptome Profiling of Petal Abscission Zone and Functional Analysis of an Aux/IAA Family Gene RhIAA16 Involved in Petal Shedding in Rose

Transcriptome Analysis of Soybean Leaf Abscission Identifies Transcriptional Regulators of Organ Polarity and Cell Fate

(2016) Joonyup Kim et al.   Frontiers in Plant Science

De novo Transcriptome Sequencing and Development of Abscission Zone-Specific Microarray as a New Molecular Tool for Analysis of Tomato Organ Abscission

(2016) Srivignesh Sundaresan et al.   Frontiers in Plant Science

A KNOTTED1-LIKE HOMEOBOX Protein Regulates Abscission in Tomato by Modulating the Auxin Pathway

(2015) Chao Ma et al.   PLANT PHYSIOLOGY

Transcriptomic analysis reveals numerous diverse protein kinases and transcription factors involved in desiccation tolerance in the resurrection plant Myrothamnus flabellifolia

(2015) Chao Ma et al.   Horticulture Research

A basic helix-loop-helix transcription factor, PhFBH4, regulates flower senescence by modulating ethylene biosynthesis pathway in petunia

(2015) Jing Yin et al.   Horticulture Research

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The AP2/ERF transcription factor SlERF52 functions in flower pedicel abscission in tomato

(2014) Toshitsugu Nakano et al.   JOURNAL OF EXPERIMENTAL BOTANY

De novo assembly and characterization of fruit transcriptome in Litchi chinensis Sonn and analysis of differentially regulated genes in fruit in response to shading

(2013) Caiqin Li et al.   BMC GENOMICS

Transcriptional profiling of the Arabidopsis abscission mutant hae hsl2 by RNA-Seq

(2013) Chad E Niederhuth et al.   BMC GENOMICS

Expression profiling of tomato pre-abscission pedicels provides insights into abscission zone properties including competence to respond to abscission signals

(2013) Toshitsugu Nakano et al.   BMC PLANT BIOLOGY

TRV–GFP: a modified Tobacco rattle virus vector for efficient and visualizable analysis of gene function

(2013) Ji Tian et al.   JOURNAL OF EXPERIMENTAL BOTANY

Activities at the Universal Protein Resource (UniProt)

(2013)   NUCLEIC ACIDS RESEARCH

Transcriptome Analysis of Mature Fruit Abscission Control in Olive

(2013) Jose A. Gil-Amado et al.   PLANT AND CELL PHYSIOLOGY

Molecular mechanisms controlling plant organ abscission

(2013) Toshitsugu Nakano et al.   Plant Biotechnology

An NAC Transcription Factor Controls Ethylene-Regulated Cell Expansion in Flower Petals

(2013) H. Pei et al.   PLANT PHYSIOLOGY

Transcriptomic Events Involved in Melon Mature-Fruit Abscission Comprise the Sequential Induction of Cell-Wall Degrading Genes Coupled to a Stimulation of Endo and Exocytosis

(2013) Jorge Corbacho et al.   PLoS One

Transcriptome Analysis of Tomato Flower Pedicel Tissues Reveals Abscission Zone-Specific Modulation of Key Meristem Activity Genes

(2013) Xiang Wang et al.   PLoS One

Reducing jasmonic acid levels causesein2mutants to become ethylene responsive

(2012) Joonyup Kim et al.   FEBS LETTERS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Genome-Wide Identification, Functional Analysis and Expression Profiling of the Aux/IAA Gene Family in Tomato

(2012) Corinne Audran-Delalande et al.   PLANT AND CELL PHYSIOLOGY

Elucidating mechanisms underlying organ abscission

(2012) Leandro H. Estornell et al.   PLANT SCIENCE

iAssembler: a package for de novo assembly of Roche-454/Sanger transcriptome sequences

(2011) Yi Zheng et al.   BMC BIOINFORMATICS

Transcriptomics of shading-induced and NAA-induced abscission in apple (Malus domestica) reveals a shared pathway involving reduced photosynthesis, alterations in carbohydrate transport and signaling and hormone crosstalk

(2011) Hong Zhu et al.   BMC PLANT BIOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

(2011) Philippe Lamesch et al.   NUCLEIC ACIDS RESEARCH

Tomato TILLING Technology: Development of a Reverse Genetics Tool for the Efficient Isolation of Mutants from Micro-Tom Mutant Libraries

(2011) Yoshihiro Okabe et al.   PLANT AND CELL PHYSIOLOGY

MACROCALYX and JOINTLESS Interact in the Transcriptional Regulation of Tomato Fruit Abscission Zone Development

(2011) T. Nakano et al.   PLANT PHYSIOLOGY

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

The EVERSHED receptor-like kinase modulates floral organ shedding in Arabidopsis

(2010) M. E. Leslie et al.   DEVELOPMENT

Microarray Analysis of the Abscission-Related Transcriptome in the Tomato Flower Abscission Zone in Response to Auxin Depletion

(2010) S. Meir et al.   PLANT PHYSIOLOGY

Signaling Pathways Mediating the Induction of Apple Fruitlet Abscission

(2010) A. Botton et al.   PLANT PHYSIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Regulation of membrane trafficking and organ separation by the NEVERSHED ARF-GAP protein

(2009) S. J. Liljegren et al.   DEVELOPMENT

Sl-IAA3, a tomato Aux/IAA at the crossroads of auxin and ethylene signalling involved in differential growth

(2009) Salma Chaabouni et al.   JOURNAL OF EXPERIMENTAL BOTANY

ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE1 (ADPG1), ADPG2, and QUARTET2 Are Polygalacturonases Required for Cell Separation during Reproductive Development in Arabidopsis

(2009) M. Ogawa et al.   PLANT CELL

The zinc finger network of plants

(2008) S. Ciftci-Yilmaz et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Stamen Abscission Zone Transcriptome Profiling Reveals New Candidates for Abscission Control: Enhanced Retention of Floral Organs in Transgenic Plants Overexpressing Arabidopsis ZINC FINGER PROTEIN2

(2008) S. Cai et al.   PLANT PHYSIOLOGY

Comprehensive expression profiling analysis of OsIAA gene family in developmental processes and in response to phytohormone and stress treatments

(2008) Yaling Song et al.   PLANTA

Regulation of floral organ abscission in Arabidopsis thaliana

(2008) S. K. Cho et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA