Transcriptomic Events Involved in Melon Mature-Fruit Abscission Comprise the Sequential Induction of Cell-Wall Degrading Genes Coupled to a Stimulation of Endo and Exocytosis

Challenges and strategies in transcriptome assembly and differential gene expression quantification. A comprehensivein silicoassessment of RNA-seq experiments

(2012) Nagarjun Vijay et al.   MOLECULAR ECOLOGY

The genome of melon (Cucumis melo L.)

(2012) J. Garcia-Mas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analysis of expressed sequence tags generated from full-length enriched cDNA libraries of melon

(2011) Christian Clepet et al.   BMC GENOMICS

Transcriptomics of shading-induced and NAA-induced abscission in apple (Malus domestica) reveals a shared pathway involving reduced photosynthesis, alterations in carbohydrate transport and signaling and hormone crosstalk

(2011) Hong Zhu et al.   BMC PLANT BIOLOGY

Plants grow on brassinosteroids

(2011) Gustavo E Gudesblat et al.   CURRENT OPINION IN PLANT BIOLOGY

Polyamine-induced modulation of genes involved in ethylene biosynthesis and signalling pathways and nitric oxide production during olive mature fruit abscission

(2011) Maria C. Parra-Lobato et al.   JOURNAL OF EXPERIMENTAL BOTANY

Petal abscission in rose is associated with the differential expression of two ethylene-responsive xyloglucan endotransglucosylase/hydrolase genes, RbXTH1 and RbXTH2

(2011) A. P. Singh et al.   JOURNAL OF EXPERIMENTAL BOTANY

PP2A activates brassinosteroid-responsive gene expression and plant growth by dephosphorylating BZR1

(2011) Wenqiang Tang et al.   NATURE CELL BIOLOGY

Computational methods for transcriptome annotation and quantification using RNA-seq

(2011) Manuel Garber et al.   NATURE METHODS

Blue-light-mediated shade avoidance requires combined auxin and brassinosteroid action in Arabidopsis seedlings

(2011) Diederik H. Keuskamp et al.   PLANT JOURNAL

Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families

(2011) Richard J. Pattison et al.   PLANT JOURNAL

CAST AWAY, a Membrane-Associated Receptor-Like Kinase, Inhibits Organ Abscission in Arabidopsis

(2011) C. A. Burr et al.   PLANT PHYSIOLOGY

Regulation of polyamine metabolism and biosynthetic gene expression during olive mature-fruit abscission

(2011) Jose A. Gil-Amado et al.   PLANTA

Use of Non-Normalized, Non-Amplified cDNA for 454-Based RNA Sequencing of Fleshy Melon Fruit

(2011) Vitaly Portnoy et al.   Plant Genome

Protein Phosphatase 2A Controls Ethylene Biosynthesis by Differentially Regulating the Turnover of ACC Synthase Isoforms

(2011) Kyle R. Skottke et al.   PLoS Genetics

High-throughput marker discovery in melon using a self-designed oligo microarray

(2010) Ron Ophir et al.   BMC GENOMICS

The auxin influx carriers AUX1 and LAX3 are involved in auxin-ethylene interactions during apical hook development in Arabidopsis thaliana seedlings

(2010) F. Vandenbussche et al.   DEVELOPMENT

Mature fruit abscission is associated with up-regulation of polyamine metabolism in the olive abscission zone

(2010) Maria C. Gomez-Jimenez et al.   JOURNAL OF PLANT PHYSIOLOGY

The SERK1 receptor-like kinase regulates organ separation in Arabidopsis flowers

(2010) Michael W. Lewis et al.   PLANT JOURNAL

Microarray Analysis of the Abscission-Related Transcriptome in the Tomato Flower Abscission Zone in Response to Auxin Depletion

(2010) S. Meir et al.   PLANT PHYSIOLOGY

Signaling Pathways Mediating the Induction of Apple Fruitlet Abscission

(2010) A. Botton et al.   PLANT PHYSIOLOGY

A genetic map of melon highly enriched with fruit quality QTLs and EST markers, including sugar and carotenoid metabolism genes

(2010) R. Harel-Beja et al.   THEORETICAL AND APPLIED GENETICS

An oligo-based microarray offers novel transcriptomic approaches for the analysis of pathogen resistance and fruit quality traits in melon (Cucumis melo L.)

(2009) Albert Mascarell-Creus et al.   BMC GENOMICS

A set of EST-SNPs for map saturation and cultivar identification in melon

(2009) Wim Deleu et al.   BMC PLANT BIOLOGY

Dominance induction of fruitlet shedding in Malus × domestica (L. Borkh): molecular changes associated with polar auxin transport

(2009) Valeriano Dal Cin et al.   BMC PLANT BIOLOGY

Comparative transcriptional survey between laser-microdissected cells from laminar abscission zone and petiolar cortical tissue during ethylene-promoted abscission in citrus leaves

(2009) Javier Agustí et al.   BMC PLANT BIOLOGY

Regulation of membrane trafficking and organ separation by the NEVERSHED ARF-GAP protein

(2009) S. J. Liljegren et al.   DEVELOPMENT

Transgenic indica rice expressing a bitter melon (Momordica charantia) class I chitinase gene (McCHIT1) confers enhanced resistance to Magnaporthe grisea and Rhizoctonia solani

(2009) Ping Li et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress

(2009) Aiping Zang et al.   JOURNAL OF EXPERIMENTAL BOTANY

ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE1 (ADPG1), ADPG2, and QUARTET2 Are Polygalacturonases Required for Cell Separation during Reproductive Development in Arabidopsis

(2009) M. Ogawa et al.   PLANT CELL

The role of Rab GTPases in cell wall metabolism

(2008) G. Lycett   JOURNAL OF EXPERIMENTAL BOTANY

NAA and Ethylene Regulate Expression of Genes Related to Ethylene Biosynthesis, Perception, and Cell Wall Degradation During Fruit Abscission and Ripening in ‘Delicious’ Apples

(2008) Jianguo Li et al.   JOURNAL OF PLANT GROWTH REGULATION

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

EMB2473/MIRO1, an Arabidopsis Miro GTPase, Is Required for Embryogenesis and Influences Mitochondrial Morphology in Pollen

(2008) S. Yamaoka et al.   PLANT CELL

Stamen Abscission Zone Transcriptome Profiling Reveals New Candidates for Abscission Control: Enhanced Retention of Floral Organs in Transgenic Plants Overexpressing Arabidopsis ZINC FINGER PROTEIN2

(2008) S. Cai et al.   PLANT PHYSIOLOGY

Climacteric fruit ripening: Ethylene-dependent and independent regulation of ripening pathways in melon fruit

(2008) J.C. Pech et al.   PLANT SCIENCE

Regulation of floral organ abscission in Arabidopsis thaliana

(2008) S. K. Cho et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA