Organohalide Respiring Bacteria and Reductive Dehalogenases: Key Tools in Organohalide Bioremediation

Biochemical and EPR-Spectroscopic Investigation into Heterologously Expressed Vinyl Chloride Reductive Dehalogenase (VcrA) from Dehalococcoides mccartyi Strain VS

(2015) Anutthaman Parthasarathy et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Reductive Dehalogenases Come of Age in Biological Destruction of Organohalides

(2015) Bat-Erdene Jugder et al.   TRENDS IN BIOTECHNOLOGY

Detoxification of 1,1,2-Trichloroethane to Ethene by Desulfitobacterium and Identification of Its Functional Reductase Gene

(2015) Siyan Zhao et al.   PLoS One

Functional Heterologous Production of Reductive Dehalogenases from Desulfitobacterium hafniense Strains

(2014) Anita Mac Nelly et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Reassessment of PCR primers targeting 16S rRNA genes of the organohalide-respiring genus Dehalogenimonas

(2014) Jie Chen et al.   BIODEGRADATION

ADesulfitobacteriumsp. strain PR reductively dechlorinates both 1,1,1-trichloroethane and chloroform

(2014) Chang Ding et al.   ENVIRONMENTAL MICROBIOLOGY

Insights into organohalide respiration and the versatile catabolism ofSulfurospirillum multivoransgained from comparative genomics and physiological studies

(2014) Tobias Goris et al.   ENVIRONMENTAL MICROBIOLOGY

Nanoliter qPCR Platform for Highly Parallel, Quantitative Assessment of Reductive Dehalogenase Genes and Populations of Dehalogenating Microorganisms in Complex Environments

(2014) Koshlan Mayer-Blackwell et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Bioaugmentation with Distinct Dehalobacter Strains Achieves Chloroform Detoxification in Microcosms

(2014) Shandra D. Justicia-Leon et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Genomic, Proteomic, and Biochemical Analysis of the Organohalide Respiratory Pathway in Desulfitobacterium dehalogenans

(2014) Thomas Kruse et al.   JOURNAL OF BACTERIOLOGY

Reductive dehalogenase structure suggests a mechanism for B12-dependent dehalogenation

(2014) Karl A. P. Payne et al.   NATURE

Structural basis for organohalide respiration

(2014) Martin Bommer et al.   SCIENCE

Functional Genotyping of Sulfurospirillum spp. in Mixed Cultures Allowed the Identification of a New Tetrachloroethene Reductive Dehalogenase

(2013) Géraldine F. Buttet et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification and Environmental Distribution ofdcpA, Which Encodes the Reductive Dehalogenase Catalyzing the Dichloroelimination of 1,2-Dichloropropane to Propene in Organohalide-Respiring Chloroflexi

(2013) Elizabeth Padilla-Crespo et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Successful operation of continuous reactors at short retention times results in high-density, fast-rate Dehalococcoides dechlorinating cultures

(2013) Anca G. Delgado et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Genomic insights into organohalide respiration

(2013) Ruth Ellen Richardson   CURRENT OPINION IN BIOTECHNOLOGY

Integration of stable carbon isotope, microbial community, dissolved hydrogen gas, and 2HH2O tracer data to assess bioaugmentation for chlorinated ethene degradation in fractured rocks

(2013) Kinga M. Révész et al.   JOURNAL OF CONTAMINANT HYDROLOGY

Quantitative estimation of Dehalococcoides mccartyi at laboratory and field scale: Comparative study between CARD-FISH and Real Time PCR

(2013) B. Matturro et al.   JOURNAL OF MICROBIOLOGICAL METHODS

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Identification of Dehalobacter reductive dehalogenases that catalyse dechlorination of chloroform, 1,1,1-trichloroethane and 1,1-dichloroethane

(2013) S. Tang et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The restricted metabolism of the obligate organohalide respiring bacterium Dehalobacter restrictus: lessons from tiered functional genomics

(2013) A. Rupakula et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases

(2013) L. A. Hug et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Fundamentals and electrochemical applications of [Ni–Fe]-uptake hydrogenases

(2013) Bat-Erdene Jugder et al.   RSC Advances

Complete genome sequence of Dehalobacter restrictus PER-K23T

(2013) Thomas Kruse et al.   Standards in Genomic Sciences

Functional Characterization of Reductive Dehalogenases by Using Blue Native Polyacrylamide Gel Electrophoresis

(2012) Shuiquan Tang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Field distribution and activity of chlorinated solvents degrading bacteria by combining CARD-FISH and real time PCR

(2012) B. Matturro et al.   New Biotechnology

Semi-Automatic In Silico Gap Closure Enabled De Novo Assembly of Two Dehalobacter Genomes from Metagenomic Data

(2012) Shuiquan Tang et al.   PLoS One

Heterologous expression, purification and cofactor reconstitution of the reductive dehalogenase PceA from Dehalobacter restrictus

(2012) Hanno Sjuts et al.   PROTEIN EXPRESSION AND PURIFICATION

Ecogenomics of microbial communities in bioremediation of chlorinated contaminated sites

(2012) Farai Maphosa et al.   Frontiers in Microbiology

Natural Niche for Organohalide-Respiring Chloroflexi

(2011) Mark J. Krzmarzick et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity of Five Anaerobic Toluene-Degrading Microbial Communities Investigated Using Stable Isotope Probing

(2011) Weimin Sun et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Enrichment and Characterization of a Trichloroethene-Dechlorinating Consortium Containing Multiple “Dehalococcoides” Strains

(2011) Taiki FUTAGAMI et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Site-Specific Mobilization of Vinyl Chloride Respiration Islands by a Mechanism Common in Dehalococcoides

(2011) Paul J McMurdie et al.   BMC GENOMICS

Horizontal transfer of dehalogenase genes involved in the catalysis of chlorinated compounds: evidence and ecological role

(2011) Bin Liang et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Complete chloroform dechlorination by organochlorine respiration and fermentation

(2011) Matthew Lee et al.   ENVIRONMENTAL MICROBIOLOGY

The evolution of new enzyme function: lessons from xenobiotic metabolizing bacteria versus insecticide-resistant insects

(2011) Robyn J. Russell et al.   Evolutionary Applications

Quantitative real-time PCR (qPCR) detection chemistries affect enumeration of the Dehalococcoides 16S rRNA gene in groundwater

(2011) Janet K. Hatt et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Quantification of organic pollutant degradation in contaminated aquifers using compound specific stable isotope analysis – Review of recent developments

(2011) Martin Thullner et al.   ORGANIC GEOCHEMISTRY

Cloning of a Novel Dehalogenase from Environmental DNA

(2010) Hisashi KIMOTO et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Chloroform respiration to dichloromethane by a Dehalobacter population

(2010) Ariel Grostern et al.   ENVIRONMENTAL MICROBIOLOGY

Exploiting the ecogenomics toolbox for environmental diagnostics of organohalide-respiring bacteria

(2010) Farai Maphosa et al.   TRENDS IN BIOTECHNOLOGY

Bioaugmentation for chlorinated ethenes using Dehalococcoides sp.: Comparison between batch and column experiments

(2009) Charles E. Schaefer et al.   CHEMOSPHERE

Recombinant bacteria for environmental release: what went wrong and what we have learnt from it

(2009) V. de Lorenzo   CLINICAL MICROBIOLOGY AND INFECTION

Large-scale production of bacterial consortia for remediation of chlorinated solvent-contaminated groundwater

(2009) Simon Vainberg et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Localized Plasticity in the Streamlined Genomes of Vinyl Chloride Respiring Dehalococcoides

(2009) Paul J. McMurdie et al.   PLoS Genetics

Structure analysis and performance of a microbial community from a contaminated aquifer involved in the complete reductive dechlorination of 1,1,2,2-tetrachloroethane to ethene

(2008) Simona Rossetti et al.   BIOTECHNOLOGY AND BIOENGINEERING

Real-time PCR quantification of Dehalococcoides populations: Methods and applications

(2007) Alison M. Cupples   JOURNAL OF MICROBIOLOGICAL METHODS