The restricted metabolism of the obligate organohalide respiring bacterium Dehalobacter restrictus: lessons from tiered functional genomics

The Physiological Opportunism of Desulfitobacterium hafniense Strain TCE1 towards Organohalide Respiration with Tetrachloroethene

(2012) Aurélie Duret et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction

(2012) Sang-Hoon Kim et al.   BMC MICROBIOLOGY

An unusual tandem-domain rhodanese harbouring two active sites identified in Desulfitobacterium hafniense

(2012) Laure Prat et al.   FEBS Journal

Stable Isotope Peptide Mass Spectrometry To Decipher Amino Acid Metabolism in Dehalococcoides Strain CBDB1

(2012) E. Marco-Urrea et al.   JOURNAL OF BACTERIOLOGY

Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments

(2012) Alexey I. Nesvizhskii   PROTEOMICS

Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9T) and comparison to “Dehalococcoides” strains

(2012) Shivakumara Siddaramappa et al.   Standards in Genomic Sciences

Dichloromethane Fermentation by a Dehalobacter sp. in an Enrichment Culture Derived from Pristine River Sediment

(2011) Shandra D. Justicia-Leon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Global Transcriptomic and Proteomic Responses of Dehalococcoides ethenogenes Strain 195 to Fixed Nitrogen Limitation

(2011) Patrick K. H. Lee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Physiological Adaptation of Desulfitobacterium hafniense Strain TCE1 to Tetrachloroethene Respiration

(2011) Laure Prat et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Quantitative Analysis of the Relative Transcript Levels of Four Chlorophenol Reductive Dehalogenase Genes in Desulfitobacterium hafniense PCP-1 Exposed to Chlorophenols

(2011) Ariane Bisaillon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Complete chloroform dechlorination by organochlorine respiration and fermentation

(2011) Matthew Lee et al.   ENVIRONMENTAL MICROBIOLOGY

A Role forDehalobacterspp. in the Reductive Dehalogenation of Dichlorobenzenes and Monochlorobenzene

(2011) Jennifer L. Nelson et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Global transcriptome analysis of the tetrachloroethene-dechlorinating bacterium Desulfitobacterium hafniense Y51 in the presence of various electron donors and terminal electron acceptors

(2011) Xue Peng et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

The Evolution of Respiratory Chain Complex I from a Smaller Last Common Ancestor Consisting of 11 Protein Subunits

(2011) Vamsi K. Moparthi et al.   JOURNAL OF MOLECULAR EVOLUTION

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

(2011) Jürgen Cox et al.   JOURNAL OF PROTEOME RESEARCH

Filter-aided sample preparation with dimethyl labeling to identify and quantify milk fat globule membrane proteins

(2011) Jing Lu et al.   Journal of Proteomics

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Chloroform respiration to dichloromethane by a Dehalobacter population

(2010) Ariel Grostern et al.   ENVIRONMENTAL MICROBIOLOGY

Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions

(2010) Nina C. Hubner et al.   JOURNAL OF CELL BIOLOGY

Plasmid pSM19035, a model to study stable maintenance in Firmicutes

(2010) Virginia S. Lioy et al.   PLASMID

Characterizing the Metabolism of Dehalococcoides with a Constraint-Based Model

(2010) M. Ahsanul Islam et al.   PLoS Computational Biology

A Novel Dehalobacter Species Is Involved in Extensive 4,5,6,7-Tetrachlorophthalide Dechlorination

(2009) N. Yoshida et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of a Dehalobacter Coculture That Dechlorinates 1,2-Dichloroethane to Ethene and Identification of the Putative Reductive Dehalogenase Gene

(2009) A. Grostern et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Transcription Analysis of Genes Encoding Homologues of Reductive Dehalogenases in "Dehalococcoides" sp. Strain CBDB1 by Using Terminal Restriction Fragment Length Polymorphism and Quantitative PCR

(2009) A. Wagner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ubiquitous late competence genes inBacillusspecies indicate the presence of functional DNA uptake machineries

(2009) Ákos T. Kovács et al.   ENVIRONMENTAL MICROBIOLOGY

Transcriptomic microarray analysis of corrinoid responsive genes inDehalococcoides ethenogenesstrain 195

(2009) David R. Johnson et al.   FEMS MICROBIOLOGY LETTERS

Investigation of Carbon Metabolism in "Dehalococcoides ethenogenes" Strain 195 by Use of Isotopomer and Transcriptomic Analyses

(2009) Y. J. Tang et al.   JOURNAL OF BACTERIOLOGY

In Vivo Analysis of Cobinamide Salvaging in Rhodobacter sphaeroides Strain 2.4.1

(2009) M. J. Gray et al.   JOURNAL OF BACTERIOLOGY

Comparative Genomics of "Dehalococcoides ethenogenes" 195 and an Enrichment Culture Containing Unsequenced "Dehalococcoides" Strains

(2008) K. A. West et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Temporal Transcriptomic Microarray Analysis of "Dehalococcoides ethenogenes" Strain 195 during the Transition into Stationary Phase

(2008) D. R. Johnson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Enzymes involved in the anoxic utilization of phenyl methyl ethers by Desulfitobacterium hafniense DCB2 and Desulfitobacterium hafniense PCE-S

(2008) Sandra Kreher et al.   ARCHIVES OF MICROBIOLOGY

Escherichia coliSignal Peptide Peptidase A Is a Serine-Lysine Protease with a Lysine Recruited to the Nonconserved Amino-Terminal Domain in the S49 Protease Family†

(2008) Peng Wang et al.   BIOCHEMISTRY

Dual Roles of an Essential Cysteine Residue in Activity of a Redox-regulated Bacterial Transcriptional Activator

(2008) Nirupama Gupta et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Divergent roles of CprK paralogues from Desulfitobacterium hafniense in activating gene expression

(2008) K. Gabor et al.   MICROBIOLOGY-SGM

Molecular basis of halorespiration control by CprK, a CRP-FNR type transcriptional regulator

(2008) Colin Levy et al.   MOLECULAR MICROBIOLOGY

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY