Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae
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Title
Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae
Authors
Keywords
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Journal
Frontiers in Microbiology
Volume 7, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2016-06-08
DOI
10.3389/fmicb.2016.00877
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Note: Only part of the references are listed.- Culturing and Characterization of Gut Symbiont Burkholderia spp. from the Southern Chinch Bug, Blissus insularis (Hemiptera: Blissidae)
- (2016) Yao Xu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- To split or not to split: an opinion on dividing the genus Burkholderia
- (2015) Paulina Estrada-de los Santos et al. ANNALS OF MICROBIOLOGY
- Burkholderia megalochromosomata sp. nov., isolated from grassland soil
- (2015) I. Baek et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Molecular mechanisms underlying the close association between soil Burkholderia and fungi
- (2015) Nejc Stopnisek et al. ISME Journal
- FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program: Table 1.
- (2015) Vincent Lefort et al. MOLECULAR BIOLOGY AND EVOLUTION
- Insecticide applications to soil contribute to the development ofBurkholderiamediating insecticide resistance in stinkbugs
- (2015) Kanako Tago et al. MOLECULAR ECOLOGY
- Functional overlap of the Arabidopsis leaf and root microbiota
- (2015) Yang Bai et al. NATURE
- Past and future species definitions for Bacteria and Archaea
- (2015) Ramon Rosselló-Móra et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Genome sequences as the type material for taxonomic descriptions of prokaryotes
- (2015) William B. Whitman SYSTEMATIC AND APPLIED MICROBIOLOGY
- Genomic insights into the taxonomic status of the Bacillus cereus group
- (2015) Yang Liu et al. Scientific Reports
- Inexpensive Multiplexed Library Preparation for Megabase-Sized Genomes
- (2015) Michael Baym et al. PLoS One
- Time to revisit polyphasic taxonomy
- (2014) Peter Vandamme et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Microbial taxonomy in the post-genomic era: Rebuilding from scratch?
- (2014) Cristiane C. Thompson et al. ARCHIVES OF MICROBIOLOGY
- Prokka: rapid prokaryotic genome annotation
- (2014) T. Seemann BIOINFORMATICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Burkholderia jiangsuensis sp. nov., a methyl parathion degrading bacterium, isolated from methyl parathion contaminated soil
- (2014) X.-Y. Liu et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Burkholderia cordobensis sp. nov., from agricultural soils
- (2014) W. O. Draghi et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Taxonomic use of DNA G+C content and DNA–DNA hybridization in the genomic age
- (2014) Jan P. Meier-Kolthoff et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Plant-Associated Symbiotic Burkholderia Species Lack Hallmark Strategies Required in Mammalian Pathogenesis
- (2014) Annette A. Angus et al. PLoS One
- Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
- (2014) Bruce J. Walker et al. PLoS One
- Intraspecific variation in Burkholderia caledonica: Europe vs. Africa and soil vs. endophytic isolates
- (2014) Brecht Verstraete et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Bioinformatic Genome Comparisons for Taxonomic and Phylogenetic Assignments Using Aeromonas as a Test Case
- (2014) Sophie M. Colston et al. mBio
- Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species
- (2014) Amandeep Sawana et al. Frontiers in Genetics
- QUAST: quality assessment tool for genome assemblies
- (2013) Alexey Gurevich et al. BIOINFORMATICS
- Genome sequence-based species delimitation with confidence intervals and improved distance functions
- (2013) Jan P Meier-Kolthoff et al. BMC BIOINFORMATICS
- Highly parallelized inference of large genome-based phylogenies
- (2013) Jan P. Meier-Kolthoff et al. CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE
- Burkholderia humi sp. nov., Burkholderia choica sp. nov., Burkholderia telluris sp. nov., Burkholderia terrestris sp. nov. and Burkholderia udeis sp. nov.: Burkholderia glathei-like bacteria from soil and rhizosphere soil
- (2013) P. Vandamme et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Symbiotic ß-Proteobacteria beyond Legumes: Burkholderia in Rubiaceae
- (2013) Brecht Verstraete et al. PLoS One
- Burkholderia pseudomultivorans sp. nov., a novel Burkholderia cepacia complex species from human respiratory samples and the rhizosphere
- (2013) Charlotte Peeters et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- The eroded genome of aPsychotrialeaf symbiont: hypotheses about lifestyle and interactions with its plant host
- (2012) Aurelien L. Carlier et al. ENVIRONMENTAL MICROBIOLOGY
- Burkholderia grimmiae sp. nov., isolated from a xerophilous moss (Grimmia montana)
- (2012) Y. Tian et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Genome Sequence of the Nitroaromatic Compound-Degrading Bacterium Burkholderia sp. Strain SJ98
- (2012) S. Kumar et al. JOURNAL OF BACTERIOLOGY
- Complete Genome Sequence of the Fenitrothion-Degrading Burkholderia sp. Strain YI23
- (2012) J. S. Lim et al. JOURNAL OF BACTERIOLOGY
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Symbiont-mediated insecticide resistance
- (2012) Y. Kikuchi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A call to action for the International Committee on Systematics of Prokaryotes
- (2012) Iain C. Sutcliffe et al. TRENDS IN MICROBIOLOGY
- Burkholderia zhejiangensis sp. nov., a methyl-parathion-degrading bacterium isolated from a wastewater-treatment system
- (2011) P. Lu et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Identification of the bacterial endosymbionts in leaf nodules of Pavetta (Rubiaceae)
- (2011) B. Lemaire et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Complete Genome Sequence of Burkholderia gladioli BSR3
- (2011) Y.-S. Seo et al. JOURNAL OF BACTERIOLOGY
- Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy
- (2011) I. Letunic et al. NUCLEIC ACIDS RESEARCH
- Bacterial Leaf Symbiosis in Angiosperms: Host Specificity without Co-Speciation
- (2011) Benny Lemaire et al. PLoS One
- The various lifestyles of the Burkholderia cepacia complex species: a tribute to adaptation
- (2010) Ludovic Vial et al. ENVIRONMENTAL MICROBIOLOGY
- An ancient but promiscuous host–symbiont association between Burkholderia gut symbionts and their heteropteran hosts
- (2010) Yoshitomo Kikuchi et al. ISME Journal
- Taxon K, a complex within the Burkholderia cepacia complex, comprises at least two novel species, Burkholderia contaminans sp. nov. and Burkholderia lata sp. nov.
- (2009) E. Vanlaere et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Expanded Multilocus Sequence Typing for Burkholderia Species
- (2009) T. Spilker et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Classification of Bacteria and Archaea: Past, present and future
- (2009) Karl Heinz Schleifer SYSTEMATIC AND APPLIED MICROBIOLOGY
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- (2009) Stéphane Uroz et al. TRENDS IN MICROBIOLOGY
- Field-Based Stable Isotope Probing Reveals the Identities of Benzoic Acid-Metabolizing Microorganisms and Their In Situ Growth in Agricultural Soil
- (2008) G. M. Pumphrey et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The Burkholderia Genome Database: facilitating flexible queries and comparative analyses
- (2008) G. L. Winsor et al. BIOINFORMATICS
- Burkholderia cepacia complex bacteria: opportunistic pathogens with important natural biology
- (2008) E. Mahenthiralingam et al. JOURNAL OF APPLIED MICROBIOLOGY
- A Genomic Distance Based on MUM Indicates Discontinuity between Most Bacterial Species and Genera
- (2008) M. Deloger et al. JOURNAL OF BACTERIOLOGY
- Comparative phylogenies of Burkholderia, Ralstonia, Comamonas, Brevundimonas and related organisms derived from rpoB, gyrB and rrs gene sequences
- (2007) Lineda Ait Tayeb et al. RESEARCH IN MICROBIOLOGY
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