The Relationship between pH and Bacterial Communities in a Single Karst Ecosystem and Its Implication for Soil Acidification

Ammonia-Oxidizing Archaea Dominate Ammonia-Oxidizing Communities within Alkaline Cave Sediments

(2016) Rui Zhao et al.   GEOMICROBIOLOGY JOURNAL

Ecogenomics Reveals Metals and Land-Use Pressures on Microbial Communities in the Waterways of a Megacity

(2015) Gourvendu Saxena et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Effects of simulated acid rain on microbial characteristics in a lateritic red soil

(2015) Hua-qin Xu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Five-Year Monitoring of Bacterial Communities in Dripping Water from the Heshang Cave in Central China: Implication for Paleoclimate Reconstruction and Ecological Functions

(2015) Yuan Yun et al.   GEOMICROBIOLOGY JOURNAL

Persistence of the dominant soil phylumAcidobacteriaby trace gas scavenging

(2015) Chris Greening et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Benthic microbial communities of coastal terrestrial and ice shelf Antarctic meltwater ponds

(2015) Stephen D. J. Archer et al.   Frontiers in Microbiology

Phylogenetic diversity of culturable fungi in the Heshang Cave, central China

(2015) Baiying Man et al.   Frontiers in Microbiology

Profiling bacterial diversity in a limestone cave of the western Loess Plateau of China

(2015) Yucheng Wu et al.   Frontiers in Microbiology

Effect of major cation water composition on the ion exchange of Np(V) on montmorillonite: NpO2+–Na+–K+–Ca2+–Mg2+ selectivity coefficients

(2014) Ana Benedicto et al.   APPLIED GEOCHEMISTRY

Changes in the composition and diversity of bacterial communities 13 years after soil reclamation of abandoned mine land in eastern China

(2014) Yuanyuan Li et al.   ECOLOGICAL RESEARCH

Taxonomical and functional microbial community selection in soybean rhizosphere

(2014) Lucas W Mendes et al.   ISME Journal

Diversity of Bacterial Communities in a Profile of a Winter Wheat Field: Known and Unknown Members

(2014) Aurore Stroobants et al.   MICROBIAL ECOLOGY

Soil pH Determines Microbial Diversity and Composition in the Park Grass Experiment

(2014) Kateryna Zhalnina et al.   MICROBIAL ECOLOGY

Changes in the Bacterial Community of Soil from a Neutral Mine Drainage Channel

(2014) Letícia Bianca Pereira et al.   PLoS One

High throughput sequencing analysis of biogeographical distribution of bacterial communities in the black soils of northeast China

(2014) Junjie Liu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm

(2013) Andrea K. Bartram et al.   FEMS MICROBIOLOGY ECOLOGY

Bacterial and Fungal Diversity of Quaternary Cave Sediment Deposits

(2013) Laura Epure et al.   GEOMICROBIOLOGY JOURNAL

Making a living while starving in the dark: metagenomic insights into the energy dynamics of a carbonate cave

(2013) Marianyoly Ortiz et al.   ISME Journal

PNAS Plus: From the Cover: Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate

(2013) N. A. Bokulich et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reconstructing the Microbial Diversity and Function of Pre-Agricultural Tallgrass Prairie Soils in the United States

(2013) N. Fierer et al.   SCIENCE

Comparison of soil microbial communities from two distinct karst areas in Hungary

(2012) Mónika Knáb et al.   ACTA MICROBIOLOGICA ET IMMUNOLOGICA HUNGARICA

Biofilm Bacterial Communities Inhabiting the Cave Walls of the Buda Thermal Karst System, Hungary

(2012) Andrea K. Borsodi et al.   GEOMICROBIOLOGY JOURNAL

Report of a three-year monitoring programme at Heshang Cave, Central China

(2012) Chaoyong Hu et al.   INTERNATIONAL JOURNAL OF SPELEOLOGY

Bacteria isolated from dripping water in the oligotrophic Heshang cave in Central China

(2012) Qianying Liu et al.   Journal of Earth Science

Prokaryotic and Eukaryotic Airborne Microorganisms as Tracers of Microclimatic Changes in the Underground (Postojna Cave, Slovenia)

(2012) Janez Mulec et al.   MICROBIAL ECOLOGY

Soil pH drives the spatial distribution of bacterial communities along elevation on Changbai Mountain

(2012) Congcong Shen et al.   SOIL BIOLOGY & BIOCHEMISTRY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Response of Surface Water Acidification in Upper Yangtze River to SO2Emissions Abatement in China

(2011) Lei Duan et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Comparative microbial sampling from eutrophic caves in Slovenia and Slovakia using RIDA ®COUNT test kits

(2011) Janez Mulec et al.   INTERNATIONAL JOURNAL OF SPELEOLOGY

The under-recognized dominance of Verrucomicrobia in soil bacterial communities

(2011) Gaddy T. Bergmann et al.   SOIL BIOLOGY & BIOCHEMISTRY

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes

(2010) Haiyan Chu et al.   ENVIRONMENTAL MICROBIOLOGY

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Occurrence of tetraether lipids in stalagmites: Implications for sources and GDGT-based proxies

(2010) Huan Yang et al.   ORGANIC GEOCHEMISTRY

Actinobacterial community dynamics in long term managed grasslands

(2009) Sasha N. Jenkins et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Soil Microbial Community Responses to Multiple Experimental Climate Change Drivers

(2009) H. F. Castro et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Assessment of the Diversity, Abundance, and Ecological Distribution of Members of Candidate Division SR1 Reveals a High Level of Phylogenetic Diversity but Limited Morphotypic Diversity

(2009) J. P. Davis et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

(2009) N. L. Ward et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses

(2009) Ryan T Jones et al.   ISME Journal

Abundance, composition, diversity and novelty of soil Proteobacteria

(2009) Anne M Spain et al.   ISME Journal

Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine

(2009) Marcus J. Claesson et al.   PLoS One

Environmental and spatial characterisation of bacterial community composition in soil to inform sampling strategies

(2009) Kate L. Baker et al.   SOIL BIOLOGY & BIOCHEMISTRY

The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria

(2008) Graeme W. Nicol et al.   ENVIRONMENTAL MICROBIOLOGY

Quantification of Holocene Asian monsoon rainfall from spatially separated cave records

(2007) Chaoyong Hu et al.   EARTH AND PLANETARY SCIENCE LETTERS

Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils

(2007) S.A. Wakelin et al.   SOIL BIOLOGY & BIOCHEMISTRY