Tracking interspecies transmission and long-term evolution of an ancient retrovirus using the genomes of modern mammals

Eocene primates of South America and the African origins of New World monkeys

(2015) Mariano Bond et al.   NATURE

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

Pan-vertebrate comparative genomics unmasks retrovirus macroevolution

(2014) Alexander Hayward et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MxB binds to the HIV-1 core and prevents the uncoating process of HIV-1

(2014) Thomas Fricke et al.   Retrovirology

The role of viral evolution in rabies host shifts and emergence

(2014) Nardus Mollentze et al.   Current Opinion in Virology

The Interferon-Inducible MxB Protein Inhibits HIV-1 Infection

(2013) Zhenlong Liu et al.   Cell Host & Microbe

Human MX2 is an interferon-induced post-entry inhibitor of HIV-1 infection

(2013) Caroline Goujon et al.   NATURE

MX2 is an interferon-induced inhibitor of HIV-1 infection

(2013) Melissa Kane et al.   NATURE

Pushing the endogenous envelope

(2013) J. E. Henzy et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Biochemical Characterization of Novel Retroviral Integrase Proteins

(2013) Allison Ballandras-Colas et al.   PLoS One

Broad-scale phylogenomics provides insights into retrovirus-host evolution

(2013) A. Hayward et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Origins of HIV and the AIDS Pandemic

(2013) P. M. Sharp et al.   Cold Spring Harbor Perspectives in Medicine

p12 Tethers the Murine Leukemia Virus Pre-integration Complex to Mitotic Chromosomes

(2013) Efrat Elis et al.   PLoS Pathogens

Extreme Genetic Fragility of the HIV-1 Capsid

(2013) Suzannah J. Rihn et al.   PLoS Pathogens

Gain-of-Sensitivity Mutations in a Trim5-Resistant Primary Isolate of Pathogenic SIV Identify Two Independent Conserved Determinants of Trim5α Specificity

(2013) Kevin R. McCarthy et al.   PLoS Pathogens

Evolutionary and biogeographic history of weasel-like carnivorans (Musteloidea)

(2012) Jun J. Sato et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Env-less endogenous retroviruses are genomic superspreaders

(2012) G. Magiorkinis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Gammaretroviral p12 protein has multiple domains that function during the early stages of replication

(2012) Darren J Wight et al.   Retrovirology

An Endogenous Foamy-like Viral Element in the Coelacanth Genome

(2012) Guan-Zhu Han et al.   PLoS Pathogens

Primates in the Eocene

(2012) Philip D. Gingerich   Palaeobiodiversity and Palaeoenvironments

Improved Integration Time Estimation of Endogenous Retroviruses with Phylogenetic Data

(2011) Hugo Martins et al.   PLoS One

The First Sequenced Carnivore Genome Shows Complex Host-Endogenous Retrovirus Relationships

(2011) Álvaro Martínez Barrio et al.   PLoS One

Recombinant Origin of the Retrovirus XMRV

(2011) T. Paprotka et al.   SCIENCE

Novel Escape Mutants Suggest an Extensive TRIM5α Binding Site Spanning the Entire Outer Surface of the Murine Leukemia Virus Capsid Protein

(2011) Sadayuki Ohkura et al.   PLoS Pathogens

Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content

(2010) Jennifer F. Hughes et al.   NATURE

Fidelity of Target Site Duplication and Sequence Preference during Integration of Xenotropic Murine Leukemia Virus-Related Virus

(2010) Sanggu Kim et al.   PLoS One

Human Y Chromosome Base-Substitution Mutation Rate Measured by Direct Sequencing in a Deep-Rooting Pedigree

(2009) Yali Xue et al.   CURRENT BIOLOGY

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

Macroevolution of Complex Retroviruses

(2009) A. Katzourakis et al.   SCIENCE

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

TRIMCyp expression in Old World primates Macaca nemestrina and Macaca fascicularis

(2008) G. Brennan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Independent genesis of chimeric TRIM5-cyclophilin proteins in two primate species

(2008) C. A. Virgen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Independent evolution of an antiviral TRIMCyp in rhesus macaques

(2008) S. J. Wilson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution of a TRIM5-CypA Splice Isoform in Old World Monkeys

(2008) Ruchi M. Newman et al.   PLoS Pathogens