HIV-1 Integrates Widely throughout the Genome of the Human Blood Fluke Schistosoma mansoni

Transgenesis in Strongyloides and related parasitic nematodes: historical perspectives, current functional genomic applications and progress towards gene disruption and editing

(2016) J. B. LOK et al.   PARASITOLOGY

Defective HIV-1 proviruses produce novel protein-coding RNA species in HIV-infected patients on combination antiretroviral therapy

(2016) Hiromi Imamichi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Retrovirus Integration Database (RID): a public database for retroviral insertion sites into host genomes

(2016) Wei Shao et al.   Retrovirology

Viral Vectors for Gene Therapy: Translational and Clinical Outlook

(2015) Melissa A. Kotterman et al.   Annual Review of Biomedical Engineering

HIV-1 Integration Landscape during Latent and Active Infection

(2015) Lillian B. Cohn et al.   CELL

The New State of the Art: Cas9 for Gene Activation and Repression

(2015) Marie F. La Russa et al.   MOLECULAR AND CELLULAR BIOLOGY

WormBase 2016: expanding to enable helminth genomic research

(2015) Kevin L. Howe et al.   NUCLEIC ACIDS RESEARCH

Knocking down schistosomes – promise for lentiviral transduction in parasites

(2015) Jana Hagen et al.   TRENDS IN PARASITOLOGY

Development and Applications of CRISPR-Cas9 for Genome Engineering

(2014) Patrick D. Hsu et al.   CELL

Human schistosomiasis

(2014) Daniel G Colley et al.   LANCET

MLV integration site selection is driven by strong enhancers and active promoters

(2014) Matthew C. LaFave et al.   NUCLEIC ACIDS RESEARCH

Molecular mechanisms of retroviral integration site selection

(2014) Mamuka Kvaratskhelia et al.   NUCLEIC ACIDS RESEARCH

Halting harmful helminths

(2014) K. F. Hoffmann et al.   SCIENCE

Pseudotyped murine leukemia virus for schistosome transgenesis: approaches, methods and perspectives

(2014) Victoria H. Mann et al.   TRANSGENIC RESEARCH

How might flukes and tapeworms maintain genome integrity without a canonical piRNA pathway?

(2014) Danielle E. Skinner et al.   TRENDS IN PARASITOLOGY

Omega-1 knockdown in Schistosoma mansoni eggs by lentivirus transduction reduces granuloma size in vivo

(2014) Jana Hagen et al.   Nature Communications

The Opisthorchis viverrini genome provides insights into life in the bile duct

(2014) Neil D. Young et al.   Nature Communications

Is Non-Homologous End-Joining Really an Inherently Error-Prone Process?

(2014) Mireille Bétermier et al.   PLoS Genetics

The Global Burden of Disease Study 2010: Interpretation and Implications for the Neglected Tropical Diseases

(2014) Peter J. Hotez et al.   PLoS Neglected Tropical Diseases

Schistosome ABC multidrug transporters: From pharmacology to physiology

(2014) Robert M. Greenberg   International Journal for Parasitology-Drugs and Drug Resistance

Genome-Wide Analysis of Alpharetroviral Integration in Human Hematopoietic Stem/Progenitor Cells

(2014) Arianna Moiani et al.   Genes

Adult somatic stem cells in the human parasite Schistosoma mansoni

(2013) James J. Collins III et al.   NATURE

The genomes of four tapeworm species reveal adaptations to parasitism

(2013) Isheng J. Tsai et al.   NATURE

Treatment with suboptimal doses of raltegravir leads to aberrant HIV-1 integrations

(2013) Janani Varadarajan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

LDL receptor and its family members serve as the cellular receptors for vesicular stomatitis virus

(2013) D. Finkelshtein et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells

(2013) Ophir Shalem et al.   SCIENCE

Nature, nurture and HIV: The effect of producer cell on viral physiology

(2013) Sergey Iordanskiy et al.   VIROLOGY

Viral and Cellular Requirements for the Nuclear Entry of Retroviral Preintegration Nucleoprotein Complexes

(2013) Kenneth Matreyek et al.   Viruses-Basel

Schistosomiasis

(2012) Bruno Gryseels   INFECTIOUS DISEASE CLINICS OF NORTH AMERICA

Whole-genome sequence of Schistosoma haematobium

(2012) Neil D Young et al.   NATURE GENETICS

A Systematically Improved High Quality Genome and Transcriptome of the Human Blood Fluke Schistosoma mansoni

(2012) Anna V. Protasio et al.   PLoS Neglected Tropical Diseases

Germline Transgenesis and Insertional Mutagenesis in Schistosoma mansoni Mediated by Murine Leukemia Virus

(2012) Gabriel Rinaldi et al.   PLoS Pathogens

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Chemical modification and design of anti-miRNA oligonucleotides

(2011) K A Lennox et al.   GENE THERAPY

Quantitative retrotransposon anchored PCR confirms transduction efficiency of transgenes in adult Schistosoma mansoni

(2011) Gabriel Rinaldi et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Human U6 promoter drives stronger shRNA activity than its schistosome orthologue in Schistosoma mansoni and human fibrosarcoma cells

(2011) Raphaël Duvoisin et al.   TRANSGENIC RESEARCH

Electroporation Facilitates Introduction of Reporter Transgenes and Virions into Schistosome Eggs

(2010) Kristine J. Kines et al.   PLoS Neglected Tropical Diseases

RNA Interference in Schistosoma mansoni Schistosomula: Selectivity, Sensitivity and Operation for Larger-Scale Screening

(2010) Saša Štefanić et al.   PLoS Neglected Tropical Diseases

The role of tegumental aquaporin from the human parasitic worm, Schistosoma mansoni, in osmoregulation and drug uptake

(2009) Zahra Faghiri et al.   FASEB JOURNAL

Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants

(2009) G. C. Langridge et al.   GENOME RESEARCH

The Schistosoma japonicum genome reveals features of host–parasite interplay

(2009)   NATURE

The genome of the blood fluke Schistosoma mansoni

(2009) Matthew Berriman et al.   NATURE

Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes

(2009) Iwanka Kozarewa et al.   NATURE METHODS

Culture for genetic manipulation of developmental stages of Schistosoma mansoni

(2009) VICTORIA H. MANN et al.   PARASITOLOGY

Mechanisms Governing Lentivirus Integration Site Selection

(2008) Angela Ciuffi   CURRENT GENE THERAPY

Integration of reporter transgenes into Schistosoma mansoni chromosomes mediated by pseudotyped murine leukemia virus

(2008) Kristine J. Kines et al.   FASEB JOURNAL

Helminth infections: the great neglected tropical diseases

(2008) Peter J. Hotez et al.   JOURNAL OF CLINICAL INVESTIGATION

The NIH-NIAID Schistosomiasis Resource Center

(2008) Fred A. Lewis et al.   PLoS Neglected Tropical Diseases

The Lentiviral Integrase Binding Protein LEDGF/p75 and HIV-1 Replication

(2008) Alan Engelman et al.   PLoS Pathogens