Low Genetic Quality Alters Key Dimensions of the Mutational Spectrum

Extensive de novo mutation rate variation between individuals and across the genome ofChlamydomonas reinhardtii

(2015) Rob W. Ness et al.   GENOME RESEARCH

Asymmetric Context-Dependent Mutation Patterns Revealed through Mutation–Accumulation Experiments

(2015) Way Sung et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evidence for recent, population-specific evolution of the human mutation rate

(2015) Kelley Harris   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Precise estimates of mutation rate and spectrum in yeast

(2014) Y. O. Zhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Estimation of the Spontaneous Mutation Rate per Nucleotide Site in a Drosophila melanogaster Full-Sib Family

(2013) Peter D. Keightley et al.   GENETICS

Population Genomic Analysis Reveals No Evidence for GC-Biased Gene Conversion in Drosophila melanogaster

(2013) Matthew C. Robinson et al.   MOLECULAR BIOLOGY AND EVOLUTION

The impact of transposable elements on eukaryotic genomes: From genome size increase to genetic adaptation to stressful environments

(2012) Benoît Chénais et al.   GENE

DNA Repair Pathway Choice Is Influenced by the Health of Drosophila melanogaster

(2012) A. D. Wang et al.   GENETICS

Evidence for elevated mutation rates in low-quality genotypes

(2012) N. P. Sharp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sequencing of Pooled DNA Samples (Pool-Seq) Uncovers Complex Dynamics of Transposable Element Insertions in Drosophila melanogaster

(2012) Robert Kofler et al.   PLoS Genetics

No Evidence of Elevated Germline Mutation Accumulation Under Oxidative Stress inCaenorhabditis elegans

(2011) Joanna Joyner-Matos et al.   GENETICS

Fitness-dependent mutation rates in finite populations

(2011) F. H. SHAW et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Variation in genome-wide mutation rates within and between human families

(2011) Donald F Conrad et al.   NATURE GENETICS

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

(2011) Tina T Hu et al.   NATURE GENETICS

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads

(2010) G. Lunter et al.   GENOME RESEARCH

Male attractiveness, fertility and susceptibility to oxidative stress are influenced by inbreeding in Drosophila simulans

(2010) K. OKADA et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana

(2010) S. Ossowski et al.   SCIENCE

Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads

(2009) K. Ye et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines

(2009) P. D. Keightley et al.   GENOME RESEARCH

Condition-dependent mutation rates and sexual selection

(2009) S. COTTON   JOURNAL OF EVOLUTIONARY BIOLOGY

Comparison of nonhomologous end joining and homologous recombination in human cells

(2008) Z MAO et al.   DNA REPAIR

The Cellular, Developmental and Population-Genetic Determinants of Mutation-Rate Evolution

(2008) M. Lynch   GENETICS

Increased Transmission of Mutations by Low-Condition Females: Evidence for Condition-Dependent DNA Repair

(2008) Aneil F Agrawal et al.   PLOS BIOLOGY

Sequence context affects the rate of short insertions and deletions in flies and primates

(2008) Amos Tanay et al.   GENOME BIOLOGY