Population genomics of C. melanopterus using target gene capture data: demographic inferences and conservation perspectives
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Population genomics of C. melanopterus using target gene capture data: demographic inferences and conservation perspectives
Authors
Keywords
-
Journal
Scientific Reports
Volume 6, Issue 1, Pages -
Publisher
Springer Nature
Online
2016-09-21
DOI
10.1038/srep33753
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Capturing protein-coding genes across highly divergent species
- (2016) Chenhong Li et al. BIOTECHNIQUES
- Demographic history and the South Pacific dispersal barrier for school shark (Galeorhinus galeus) inferred by mitochondrial DNA and microsatellite DNA mark
- (2015) Sebastián Hernández et al. FISHERIES RESEARCH
- Phylogenomics of Phrynosomatid Lizards: Conflicting Signals from Sequence Capture versus Restriction Site Associated DNA Sequencing
- (2015) Adam D. Leaché et al. Genome Biology and Evolution
- What to compare and how: Comparative transcriptomics for Evo-Devo
- (2015) Julien Roux et al. JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION
- Genetic Diversity of White Sharks, Carcharodon carcharias, in the Northwest Atlantic and Southern Africa
- (2015) S. J. O'Leary et al. JOURNAL OF HEREDITY
- DNA capture reveals transoceanic gene flow in endangered river sharks
- (2015) Chenhong Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Demographic inference using genetic data from a single individual: Separating population size variation from population structure
- (2015) Olivier Mazet et al. THEORETICAL POPULATION BIOLOGY
- Population Genetic History of Aristeus antennatus (Crustacea: Decapoda) in the Western and Central Mediterranean Sea
- (2015) Annamaria Marra et al. PLoS One
- The Doubly Conditioned Frequency Spectrum Does Not Distinguish between Ancient Population Structure and Hybridization
- (2014) Anders Eriksson et al. MOLECULAR BIOLOGY AND EVOLUTION
- Blacktip reef sharks,Carcharhinus melanopterus, have high genetic structure and varying demographic histories in their Indo-Pacific range
- (2014) Thomas M. Vignaud et al. MOLECULAR ECOLOGY
- Genetic structure of populations of whale sharks among ocean basins and evidence for their historic rise and recent decline
- (2014) Thomas M. Vignaud et al. MOLECULAR ECOLOGY
- Contemporary population structure and post-glacial genetic demography in a migratory marine species, the blacknose shark,Carcharhinus acronotus
- (2014) D. S. Portnoy et al. MOLECULAR ECOLOGY
- Comparative population genomics in animals uncovers the determinants of genetic diversity
- (2014) J. Romiguier et al. NATURE
- Genetic consequences of habitat fragmentation during a range expansion
- (2013) S Mona et al. HEREDITY
- Population structure, spatial distribution and life-history traits of blacktip reef sharksCarcharhinus melanopterus
- (2013) J. Mourier et al. JOURNAL OF FISH BIOLOGY
- Population structure and residency patterns of the blacktip reef sharkCarcharhinus melanopterusin turbid coastal environments
- (2013) A. Chin et al. JOURNAL OF FISH BIOLOGY
- RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
- (2013) B. Arnold et al. MOLECULAR ECOLOGY
- Meta-analysis reveals lower genetic diversity in overfished populations
- (2013) Malin L. Pinsky et al. MOLECULAR ECOLOGY
- The Confounding Effect of Population Structure on Bayesian Skyline Plot Inferences of Demographic History
- (2013) Rasmus Heller et al. PLoS One
- Microsatellite Analyses of Blacktip Reef Sharks (Carcharhinus melanopterus) in a Fragmented Environment Show Structured Clusters
- (2013) Thomas Vignaud et al. PLoS One
- Demographic Divergence History of Pied Flycatcher and Collared Flycatcher Inferred from Whole-Genome Re-sequencing Data
- (2013) Krystyna Nadachowska-Brzyska et al. PLoS Genetics
- Robust Demographic Inference from Genomic and SNP Data
- (2013) Laurent Excoffier et al. PLoS Genetics
- Estimating demographic parameters from large-scale population genomic data using Approximate Bayesian Computation
- (2012) Sen Li et al. BMC GENETICS
- Changes in size distributions of commercially exploited sharks over 25 years in northern Australia using a Bayesian approach
- (2012) Iain C. Field et al. FISHERIES RESEARCH
- Direct genetic evidence for reproductive philopatry and associated fine-scale migrations in female blacktip reef sharks (Carcharhinus melanopterus) in French Polynesia
- (2012) Johann Mourier et al. MOLECULAR ECOLOGY
- abc: an R package for approximate Bayesian computation (ABC)
- (2012) Katalin Csilléry et al. Methods in Ecology and Evolution
- A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
- (2011) H. Li BIOINFORMATICS
- Inferring Population Decline and Expansion From Microsatellite Data: A Simulation-Based Evaluation of the Msvar Method
- (2011) Christophe Girod et al. GENETICS
- Spatial and temporal movement patterns of a multi-species coastal reef shark aggregation
- (2011) CW Speed et al. MARINE ECOLOGY PROGRESS SERIES
- Strong reproductive isolation between humans and Neanderthals inferred from observed patterns of introgression
- (2011) M. Currat et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Confounding Effects of Population Structure, Genetic Diversity and the Sampling Scheme on the Detection and Quantification of Population Size Changes
- (2010) L. Chikhi et al. GENETICS
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- Long-term movement patterns and trophic ecology of blacktip reef sharks (Carcharhinus melanopterus) at Palmyra Atoll
- (2010) Yannis P. Papastamatiou et al. JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY
- ABC as a flexible framework to estimate demography over space and time: some cons, many pros
- (2010) G. BERTORELLE et al. MOLECULAR ECOLOGY
- Distinguishing between population bottleneck and population subdivision by a Bayesian model choice procedure
- (2010) BENJAMIN M. PETER et al. MOLECULAR ECOLOGY
- Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
- (2010) LAURENT EXCOFFIER et al. Molecular Ecology Resources
- Spatio-temporal population structuring and genetic diversity retention in depleted Atlantic Bluefin tuna of the Mediterranean Sea
- (2010) G. Riccioni et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Resolving postglacial phylogeography using high-throughput sequencing
- (2010) K. J. Emerson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- De novo transcriptome assembly with ABySS
- (2009) I. Birol et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Scale-dependent effects of habitat on movements and path structure of reef sharks at a predator-dominated atoll
- (2009) Yannis P. Papastamatiou et al. ECOLOGY
- The Impact of Sampling Schemes on the Site Frequency Spectrum in Nonequilibrium Subdivided Populations
- (2009) T. Stadler et al. GENETICS
- The ‘Expansion-Contraction’ model of Pleistocene biogeography: rocky shores suffer a sea change?
- (2009) PETER B. MARKO et al. MOLECULAR ECOLOGY
- Demographic History of European Populations of Arabidopsis thaliana
- (2008) Olivier François et al. PLoS Genetics
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started