Genetic structure of populations of whale sharks among ocean basins and evidence for their historic rise and recent decline

Ancient hyaenas highlight the old problem of estimating evolutionary rates

(2014) Beth Shapiro et al.   MOLECULAR ECOLOGY

Inferred global connectivity of whale sharkRhincodon typuspopulations

(2013) A. M. M. Sequeira et al.   JOURNAL OF FISH BIOLOGY

The Confounding Effect of Population Structure on Bayesian Skyline Plot Inferences of Demographic History

(2013) Rasmus Heller et al.   PLoS One

Microsatellite Analyses of Blacktip Reef Sharks (Carcharhinus melanopterus) in a Fragmented Environment Show Structured Clusters

(2013) Thomas Vignaud et al.   PLoS One

Effects of species biology on the historical demography of sharks and their implications for likely consequences of contemporary climate change

(2012) Shannon M. O’Brien et al.   CONSERVATION GENETICS

A preliminary survey of whale shark Rhincodon typus catch and trade in China: an emerging crisis

(2012) W. Li et al.   JOURNAL OF FISH BIOLOGY

A review of the biology, fisheries and conservation of the whale shark Rhincodon typus

(2012) D. Rowat et al.   JOURNAL OF FISH BIOLOGY

The use and abuse of photographic identification in sharks and rays

(2012) A. D. Marshall et al.   JOURNAL OF FISH BIOLOGY

Limits of Bayesian skyline plot analysis of mtDNA sequences to infer historical demographies in Pacific herring (and other species)

(2012) W. Stewart Grant et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Retrospective coalescent methods and the reconstruction of metapopulation histories in the sea

(2011) Peter B. Marko et al.   EVOLUTIONARY ECOLOGY

Time-dependent rates of molecular evolution

(2011) SIMON Y. W. HO et al.   MOLECULAR ECOLOGY

Skyline-plot methods for estimating demographic history from nucleotide sequences

(2011) SIMON Y. W. HO et al.   Molecular Ecology Resources

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

The Confounding Effects of Population Structure, Genetic Diversity and the Sampling Scheme on the Detection and Quantification of Population Size Changes

(2010) L. Chikhi et al.   GENETICS

Bayesian Inference of the Demographic History of Chimpanzees

(2010) D. Wegmann et al.   MOLECULAR BIOLOGY AND EVOLUTION

What can genetics tell us about population connectivity?

(2010) WINSOR H. LOWE et al.   MOLECULAR ECOLOGY

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Climate, Critters, and Cetaceans: Cenozoic Drivers of the Evolution of Modern Whales

(2010) F. G. Marx et al.   SCIENCE

Analysis of whale shark Rhincodon typus aggregations near South Ari Atoll, Maldives Archipelago

(2009) MJ Riley et al.   Aquatic Biology

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Cascading top-down effects of changing oceanic predator abundances

(2009) Julia K. Baum et al.   JOURNAL OF ANIMAL ECOLOGY

Isolation and characterization of microsatellite loci in the whale shark (Rhincodon typus)

(2009) DENÍ RAMÍREZ-MACÍAS et al.   Molecular Ecology Resources

Low Genetic Differentiation across Three Major Ocean Populations of the Whale Shark, Rhincodon typus

(2009) Jennifer V. Schmidt et al.   PLoS One

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Decline in whale shark size and abundance at Ningaloo Reef over the past decade: The world’s largest fish is getting smaller

(2008) Corey J.A. Bradshaw et al.   BIOLOGICAL CONSERVATION

ROBUST, COMPARABLE POPULATION METRICS THROUGH COLLABORATIVE PHOTO-MONITORING OF WHALE SHARKSRHINCODON TYPUS

(2008) Jason Holmberg et al.   ECOLOGICAL APPLICATIONS

Scarring patterns and relative mortality rates of Indian Ocean whale sharks

(2008) C. W. Speed et al.   JOURNAL OF FISH BIOLOGY

Formal definition and dating of the GSSP (Global Stratotype Section and Point) for the base of the Holocene using the Greenland NGRIP ice core, and selected auxiliary records

(2008) Mike Walker et al.   JOURNAL OF QUATERNARY SCIENCE

genepop’007: a complete re-implementation of the genepop software for Windows and Linux

(2007) FRANÇOIS ROUSSET   Molecular Ecology Resources