Ultra-dense SNP genetic map construction and identification of SiDt gene controlling the determinate growth habit in Sesamum indicum L.

Locating rearrangement events in a phylogeny based on highly fragmented assemblies

(2016) Chunfang Zheng et al.   BMC GENOMICS

Loci and candidate gene identification for resistance toSclerotinia sclerotiorumin soybean (Glycine maxL. Merr.) via association and linkage maps

(2015) Xue Zhao et al.   PLANT JOURNAL

Construction of a Genetic Linkage Map and Identification of QTLs for Seed Weight and Seed Size Traits in Lentil (Lens culinaris Medik.)

(2015) Priyanka Verma et al.   PLoS One

Genetic discovery for oil production and quality in sesame

(2015) Xin Wei et al.   Nature Communications

Genomic Simple Sequence Repeat Markers Reveal Patterns of Genetic Relatedness and Diversity in Sesame

(2015) Ayşe Özgür Uncu et al.   Plant Genome

Sequence-based ultra-dense genetic and physical maps reveal structural variations of allopolyploid cotton genomes

(2015) Sen Wang et al.   GENOME BIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Genetic analysis and molecular characterization of Chinese sesame (Sesamum indicum L.) cultivars using Insertion-Deletion (InDel) and Simple Sequence Repeat (SSR) markers

(2014) Kun Wu et al.   BMC GENETICS

Ultra-dense genetic map of durum wheat × wild emmer wheat developed using the 90K iSelect SNP genotyping assay

(2014) Raz Avni et al.   MOLECULAR BREEDING

Development of SNP and InDel markers via de novo transcriptome assembly in Sesamum indicum L.

(2014) Libin Wei et al.   MOLECULAR BREEDING

SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information

(2014) Marco Biasini et al.   NUCLEIC ACIDS RESEARCH

Discovery and mapping of Brassica juncea Sdt 1 gene associated with determinate plant growth habit

(2014) Harjeevan Kaur et al.   THEORETICAL AND APPLIED GENETICS

Genome sequencing of the high oil crop sesame provides insight into oil biosynthesis

(2014) Linhai Wang et al.   GENOME BIOLOGY

Construction of a high-density genetic map for sesame based on large scale marker development by specific length amplified fragment (SLAF) sequencing

(2013) Yanxin Zhang et al.   BMC PLANT BIOLOGY

Genetic Analysis and QTL Mapping of Seed Coat Color in Sesame (Sesamum indicum L.)

(2013) Haiyang Zhang et al.   PLoS One

Genetic diversity assessment of sesame core collection in China by phenotype and molecular markers and extraction of a mini-core collection

(2012) Yanxin Zhang et al.   BMC GENETICS

Development and validation of genic-SSR markers in sesame by RNA-seq

(2012) Haiyang Zhang et al.   BMC GENOMICS

Identification of QTLs for eight agronomically important traits using an ultra-high-density map based on SNPs generated from high-throughput sequencing in sorghum under contrasting photoperiods

(2012) Guihua Zou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identification and testing of reference genes for Sesame gene expression analysis by quantitative real-time PCR

(2012) Libin Wei et al.   PLANTA

Development of a Large SNP Genotyping Array and Generation of High-Density Genetic Maps in Tomato

(2012) Sung-Chur Sim et al.   PLoS One

The common bean growth habit gene PvTFL1y is a functional homolog of Arabidopsis TFL1

(2012) S. L. Repinski et al.   THEORETICAL AND APPLIED GENETICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Gentian Orthologs of the FT/TFL1 Gene Family Control Floral Initiation in Gentiana

(2011) Tomohiro Imamura et al.   PLANT AND CELL PHYSIOLOGY

ArabidopsisTERMINAL FLOWER1 Is Involved in the Regulation of Flowering Time and Inflorescence Development through Transcriptional Repression

(2011) Shigeru Hanano et al.   PLANT CELL

A Large Maize (Zea mays L.) SNP Genotyping Array: Development and Germplasm Genotyping, and Genetic Mapping to Compare with the B73 Reference Genome

(2011) Martin W. Ganal et al.   PLoS One

A genetic linkage map construction for sesame (Sesamum indicum L.)

(2010) Li-Bin Wei et al.   Genes & Genomics

The Soybean Stem Growth Habit Gene Dt1 Is an Ortholog of Arabidopsis TERMINAL FLOWER1

(2010) B. Liu et al.   PLANT PHYSIOLOGY

Parent-independent genotyping for constructing an ultrahigh-density linkage map based on population sequencing

(2010) W. Xie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

High-throughput genotyping by whole-genome resequencing

(2009) X. Huang et al.   GENOME RESEARCH

QTLNetwork: mapping and visualizing genetic architecture of complex traits in experimental populations

(2008) J. Yang et al.   BIOINFORMATICS

Identification of molecular markers linked to determinate growth habit in sesame

(2008) Bülent Uzun et al.   EUPHYTICA

Flowering-time genes modulate meristem determinacy and growth form in Arabidopsis thaliana

(2008) Siegbert Melzer et al.   NATURE GENETICS