Development of SNP and InDel markers via de novo transcriptome assembly in Sesamum indicum L.

Genetic Analysis and QTL Mapping of Seed Coat Color in Sesame (Sesamum indicum L.)

(2013) Haiyang Zhang et al.   PLoS One

Development and characterization of 59 polymorphic cDNA-SSR markers for the edible oil crop Sesamum indicum (Pedaliaceae)

(2012) Linhai Wang et al.   AMERICAN JOURNAL OF BOTANY

Development and Characterization of Microsatellite Markers (SSR) in Sesamum (Sesamum indicum L.) Species

(2012) B. Spandana et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Development and validation of genic-SSR markers in sesame by RNA-seq

(2012) Haiyang Zhang et al.   BMC GENOMICS

High-Throughput SNP Discovery and Genotyping for Constructing a Saturated Linkage Map of Chickpea (Cicer arietinum L.)

(2012) R. Gaur et al.   DNA RESEARCH

Characterization of single nucleotide polymorphism in Tunisian grapevine genome and their potential for population genetics and evolutionary studies

(2012) Leila Riahi et al.   GENETIC RESOURCES AND CROP EVOLUTION

RNA-Seq Identifies SNP Markers for Growth Traits in Rainbow Trout

(2012) Mohamed Salem et al.   PLoS One

Development of InDel markers for Brassica rapa based on whole-genome re-sequencing

(2012) Bo Liu et al.   THEORETICAL AND APPLIED GENETICS

Identification of SNP and SSR markers in eggplant using RAD tag sequencing

(2011) Lorenzo Barchi et al.   BMC GENOMICS

Single nucleotide polymorphism discovery in elite north american potato germplasm

(2011) John P Hamilton et al.   BMC GENOMICS

Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers

(2011) Wenliang Wei et al.   BMC GENOMICS

Discovery of Genome-Wide DNA Polymorphisms in a Landrace Cultivar of Japonica Rice by Whole-Genome Sequencing

(2011) Yuko Arai-Kichise et al.   PLANT AND CELL PHYSIOLOGY

A SNP and SSR Based Genetic Map of Asparagus Bean (Vigna. unguiculata ssp. sesquipedialis) and Comparison with the Broader Species

(2011) Pei Xu et al.   PLoS One

SNP discovery by high-throughput sequencing in soybean

(2010) Xiaolei Wu et al.   BMC GENOMICS

High-throughput SNP discovery and assay development in common bean

(2010) David L Hyten et al.   BMC GENOMICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Development of a PCR-based SNP marker system for effective selection of kernel length and kernel elongation in rice

(2010) G. Ramkumar et al.   MOLECULAR BREEDING

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Development of SNP markers and haplotype analysis of the candidate gene for rhg1, which confers resistance to soybean cyst nematode in soybean

(2009) Ying-Hui Li et al.   MOLECULAR BREEDING

High-throughput SNP genotyping with the GoldenGate assay in maize

(2009) Jianbing Yan et al.   MOLECULAR BREEDING

Single nucleotide polymorphism (SNP) discovery in the polyploidBrassica napususing Solexa transcriptome sequencing

(2009) Martin Trick et al.   PLANT BIOTECHNOLOGY JOURNAL

A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs

(2009) W. Muchero et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cotton (Gossypium spp.) R2R3-MYB transcription factors SNP identification, phylogenomic characterization, chromosome localization, and linkage mapping

(2008) Chuanfu An et al.   THEORETICAL AND APPLIED GENETICS

High-throughput genotyping with the GoldenGate assay in the complex genome of soybean

(2008) David L. Hyten et al.   THEORETICAL AND APPLIED GENETICS

High-throughput genotyping and mapping of single nucleotide polymorphisms in loblolly pine (Pinus taeda L.)

(2008) Andrew J. Eckert et al.   Tree Genetics & Genomes