Development and cross-species transferability of EST-SSR markers in Siberian wildrye (Elymus sibiricus L.) using Illumina sequencing
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Development and cross-species transferability of EST-SSR markers in Siberian wildrye (Elymus sibiricus L.) using Illumina sequencing
Authors
Keywords
-
Journal
Scientific Reports
Volume 6, Issue 1, Pages -
Publisher
Springer Nature
Online
2016-02-08
DOI
10.1038/srep20549
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Assessment of genetic diversity of Siberian wild rye (Elymus sibiricus L.) germplasms with variation of seed shattering and implication for future genetic improvement
- (2015) Wengang Xie et al. BIOCHEMICAL SYSTEMATICS AND ECOLOGY
- Novel Polymorphic Expressed-Sequence Tag–Simple-Sequence Repeat Markers in for Genetic Diversity Analyses
- (2015) Dong Luo et al. CROP SCIENCE
- High-throughput transcriptome analysis of barley (Hordeum vulgare) exposed to excessive boron
- (2015) Guzin Tombuloglu et al. GENE
- Transcriptome sequencing and comparative analysis reveal long-term flowing mechanisms in Hevea brasiliensis latex
- (2015) Fang Wei et al. GENE
- Potential of Start Codon Targeted (SCoT) Markers to Estimate Genetic Diversity and Relationships among Chinese Elymus sibiricus Accessions
- (2015) Junchao Zhang et al. MOLECULES
- The development of 204 novel EST-SSRs and their use for genetic diversity analyses in cultivated alfalfa
- (2014) Qiang Zhou et al. BIOCHEMICAL SYSTEMATICS AND ECOLOGY
- Characterization of the global transcriptome using Illumina sequencing and novel microsatellite marker information in seashore paspalum
- (2014) Xinping Jia et al. Genes & Genomics
- Development and characterization of microsatellite markers in Indian sesame (Sesamum indicum L.)
- (2014) Malathi Surapaneni et al. MOLECULAR BREEDING
- Transcriptome de novo assembly and differentially expressed genes related to cytoplasmic male sterility in kenaf (Hibiscus cannabinus L.)
- (2014) Peng Chen et al. MOLECULAR BREEDING
- Characterisation and development of EST-SSR markers in tree peony using transcriptome sequences
- (2014) Jing Wu et al. MOLECULAR BREEDING
- Characterization and cross-species transferability of EST–SSR markers developed from the transcriptome of Dysosma versipellis (Berberidaceae) and their application to population genetic studies
- (2014) Rui Guo et al. MOLECULAR BREEDING
- Exploiting Illumina Sequencing for the Development of 95 Novel Polymorphic EST-SSR Markers in Common Vetch (Vicia sativa subsp. sativa)
- (2014) Zhipeng Liu et al. MOLECULES
- Development and characterization of 53 polymorphic genomic-SSR markers in Siberian wildrye (Elymus sibiricus L.)
- (2014) Yunting Lei et al. Conservation Genetics Resources
- De novo assembly and characterization of fruit transcriptome in Litchi chinensis Sonn and analysis of differentially regulated genes in fruit in response to shading
- (2013) Caiqin Li et al. BMC GENOMICS
- Development of microsatellite markers by transcriptome sequencing in two species of Amorphophallus (Araceae)
- (2013) Xingfei Zheng et al. BMC GENOMICS
- Transcriptome analysis of Cymbidium sinense and its application to the identification of genes associated with floral development
- (2013) Jianxia Zhang et al. BMC GENOMICS
- Novel and useful genic-SSR markers from de novo transcriptome sequencing of radish (Raphanus sativus L.)
- (2013) Lulu Zhai et al. MOLECULAR BREEDING
- Development of 65 Novel Polymorphic cDNA-SSR Markers in Common Vetch (Vicia sativa subsp. sativa) Using Next Generation Sequencing
- (2013) Jong-Wook Chung et al. MOLECULES
- Analysis of the Alfalfa Root Transcriptome in Response to Salinity Stress
- (2013) Olga A. Postnikova et al. PLANT AND CELL PHYSIOLOGY
- Comparative Transcriptional Profiling Provides Insights into the Evolution and Development of the Zygomorphic Flower of Vicia sativa (Papilionoideae)
- (2013) Zhipeng Liu et al. PLoS One
- De Novo Assembly and Characterization of the Transcriptome, and Development of SSR Markers in Wax Gourd (Benicasa hispida)
- (2013) Biao Jiang et al. PLoS One
- Global Transcriptome Sequencing Using the Illumina Platform and the Development of EST-SSR Markers in Autotetraploid Alfalfa
- (2013) Zhipeng Liu et al. PLoS One
- Floral Transcriptome Sequencing for SSR Marker Development and Linkage Map Construction in the Tea Plant (Camellia sinensis)
- (2013) Li-Qiang Tan et al. PLoS One
- Phylogeny of a Genomically Diverse Group of Elymus (Poaceae) Allopolyploids Reveals Multiple Levels of Reticulation
- (2013) Roberta J. Mason-Gamer PLoS One
- De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)
- (2012) Dejun Li et al. BMC GENOMICS
- Development of simple sequence repeat markers and diversity analysis in alfalfa (Medicago sativa L.)
- (2012) Zan Wang et al. MOLECULAR BIOLOGY REPORTS
- Assessment of Worldwide Genetic Diversity of Siberian Wild Rye (Elymus sibiricus L.) Germplasm Based on Gliadin Analysis
- (2012) Xiao Ma et al. MOLECULES
- Transcriptome analysis of the roots at early and late seedling stages using Illumina paired-end sequencing and development of EST-SSR markers in radish
- (2012) Shufen Wang et al. PLANT CELL REPORTS
- De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)
- (2011) Zhangying Wang et al. BMC GENOMICS
- Partial sequencing of the bottle gourd genome reveals markers useful for phylogenetic analysis and breeding
- (2011) Pei Xu et al. BMC GENOMICS
- Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers
- (2011) Wenliang Wei et al. BMC GENOMICS
- Exploiting EST databases for the development and characterization of EST-SSR markers in castor bean (Ricinus communis L.)
- (2011) Lijun Qiu et al. BMC PLANT BIOLOGY
- Exploiting BAC-end sequences for the mining, characterization and utility of new short sequences repeat (SSR) markers in Citrus
- (2011) Manosh Kumar Biswas et al. MOLECULAR BIOLOGY REPORTS
- Development of ESTs and data mining of pineapple EST-SSRs
- (2011) W. D. Ong et al. MOLECULAR BIOLOGY REPORTS
- Large-scale development of expressed sequence tag-derived simple sequence repeat markers and diversity analysis in Arachis spp.
- (2011) Padmalatha Koilkonda et al. MOLECULAR BREEDING
- Development and characterization of genomic and expressed SSRs for levant cotton (Gossypium herbaceum L.)
- (2011) Satya Narayan Jena et al. THEORETICAL AND APPLIED GENETICS
- Physical mapping of repetitive sequences and genome analysis in six Elymus species by in situ hybridization
- (2011) Quan-Wen DOU et al. Journal of Systematics and Evolution
- Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome
- (2010) G. Zhang et al. GENOME RESEARCH
- Development and genetic mapping of microsatellite markers from whole genome shotgun sequences in Brassica oleracea
- (2010) Haitao Li et al. MOLECULAR BREEDING
- EST-SSR markers for gerbera (Gerbera hybrida)
- (2010) Li Gong et al. MOLECULAR BREEDING
- Molecular marker-assisted breeding options for maize improvement in Asia
- (2010) B. M. Prasanna et al. MOLECULAR BREEDING
- agriGO: a GO analysis toolkit for the agricultural community
- (2010) Zhou Du et al. NUCLEIC ACIDS RESEARCH
- EST-SSR based estimates on functional genetic variation in a barley (Hordeum vulgare L.) collection from Egypt
- (2009) Khaled F. M. Salem et al. GENETIC RESOURCES AND CROP EVOLUTION
- Development of Novel EST-SSRs from Sacred Lotus (Nelumbo nucifera Gaertn) and Their Utilization for the Genetic Diversity Analysis of N. nucifera
- (2009) L. Pan et al. JOURNAL OF HEREDITY
- Marker-assisted wheat breeding: present status and future possibilities
- (2009) P. K. Gupta et al. MOLECULAR BREEDING
- Assessing genetic diversity of Elymus sibiricus (Poaceae: Triticeae) populations from Qinghai-Tibet Plateau by ISSR markers
- (2008) Xiao Ma et al. BIOCHEMICAL SYSTEMATICS AND ECOLOGY
- Development, characterization and cross-species/genera transferability of EST-SSR markers for rubber tree (Hevea brasiliensis)
- (2008) S. P. Feng et al. MOLECULAR BREEDING
- RNA-Seq: a revolutionary tool for transcriptomics
- (2008) Zhong Wang et al. NATURE REVIEWS GENETICS
- Bin mapping of genomic and EST-derived SSRs in melon (Cucumis melo L.)
- (2008) I. Fernandez-Silva et al. THEORETICAL AND APPLIED GENETICS
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started