Population structure and genome-wide association analysis for frost tolerance in oat using continuous SNP array signal intensity ratios
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Title
Population structure and genome-wide association analysis for frost tolerance in oat using continuous SNP array signal intensity ratios
Authors
Keywords
Linkage Group, Kinship Matrix, Frost Tolerance, Vernalization Requirement, Winter Hardiness
Journal
THEORETICAL AND APPLIED GENETICS
Volume 129, Issue 9, Pages 1711-1724
Publisher
Springer Nature
Online
2016-06-18
DOI
10.1007/s00122-016-2734-y
References
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- (2010) E. Paradis BIOINFORMATICS
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