Macroevolution of Specificity in Cyanolichens of the GenusPeltigeraSectionPolydactylon(Lecanoromycetes, Ascomycota)

One hundred new species of lichenized fungi: a signature of undiscovered global diversity

(2016) H. T. Lumbsch et al.   Phytotaxa

Phylogenetic analyses of eurotiomycetous endophytes reveal their close affinities to Chaetothyriales, Eurotiales, and a new order – Phaeomoniellales

(2015) Ko-Hsuan Chen et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogenetic placement, species delimitation, and cyanobiont identity of endangered aquatic Peltigera species (lichen-forming Ascomycota, Lecanoromycetes)

(2014) J. Miadlikowska et al.   AMERICAN JOURNAL OF BOTANY

Widespread desert affiliation of trebouxiophycean algae (Trebouxiophyceae, Chlorophyta) including discovery of three new desert genera

(2014) Karolina Fučíková et al.   PHYCOLOGICAL RESEARCH

Do Photobiont Switch and Cephalodia Emancipation Act as Evolutionary Drivers in the Lichen Symbiosis? A Case Study in the Pannariaceae (Peltigerales)

(2014) Nicolas Magain et al.   PLoS One

Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees

(2014) Daniel L. Rabosky   PLoS One

A single macrolichen constitutes hundreds of unrecognized species

(2014) R. Lucking et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Unnoticed diversity within the disjunct moss Orthotrichum tenellum s.l. validated by morphological and molecular approaches

(2014) Rafael Medina et al.   TAXON

BAMMtools: an R package for the analysis of evolutionary dynamics on phylogenetic trees

(2014) Daniel L. Rabosky et al.   Methods in Ecology and Evolution

Collema fasciculare belongs in Arctomiaceae

(2013) Mónica A. G. OTÁLORA et al.   LICHENOLOGIST

Assessing population structure and host specialization in lichenized cyanobacteria

(2013) Heath E. O'Brien et al.   NEW PHYTOLOGIST

Cospeciation vs host-shift speciation: methods for testing, evidence from natural associations and relation to coevolution

(2013) D. M. de Vienne et al.   NEW PHYTOLOGIST

Twenty-five cultures of lichenizing fungi available for experimental studies on symbiotic systems

(2013) Tami R. McDonald et al.   SYMBIOSIS

Molecular phylogenetics and taxonomy of Hypocenomyce sensu lato (Ascomycota: Lecanoromycetes): Extreme polyphyly and morphological/ecological convergence

(2013) Mika Bendiksby et al.   TAXON

Phylogenetic estimation error can decrease the accuracy of species delimitation: a Bayesian implementation of the general mixed Yule-coalescent model

(2012) Noah M Reid et al.   BMC EVOLUTIONARY BIOLOGY

Further photomorphs in the lichen family Lobariaceae from Reunion (Mascarene archipelago) with notes on the phylogeny of Dendriscocaulon cyanomorphs

(2012) Nicolas Magain et al.   BRYOLOGIST

Does the Reproductive Strategy Affect the Transmission and Genetic Diversity of Bionts in Cyanolichens? A Case Study Using Two Closely Related Species

(2012) Mónica A. G. Otálora et al.   MICROBIAL ECOLOGY

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

Vertical and horizontal photobiont transmission within populations of a lichen symbiosis

(2012) F. DAL GRANDE et al.   MOLECULAR ECOLOGY

Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota)

(2012) Ester Gaya et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Fungal trunk pathogens associated with wood decay of almond trees on Mallorca (Spain)

(2012) D. Gramaje et al.   PERSOONIA

Mutualism and evolutionary multiplayer games: revisiting the Red King

(2012) C. S. Gokhale et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Diversitree: comparative phylogenetic analyses of diversification in R

(2012) Richard G. FitzJohn   Methods in Ecology and Evolution

PICS-Ord: unlimited coding of ambiguous regions by pairwise identity and cost scores ordination

(2011) Robert Lücking et al.   BMC BIOINFORMATICS

Structurama: Bayesian Inference of Population Structure

(2011) John P. Huelsenbeck et al.   Evolutionary Bioinformatics

Goodbye morphology? A paradigm shift in the delimitation of species in lichenized fungi

(2011) H. Thorsten Lumbsch et al.   FUNGAL DIVERSITY

Do photobionts influence the ecology of lichens? A case study of environmental preferences in symbiotic green alga Asterochloris (Trebouxiophyceae)

(2011) ONDŘEJ PEKSA et al.   MOLECULAR ECOLOGY

Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata

(2011) F. FERNÁNDEZ-MENDOZA et al.   MOLECULAR ECOLOGY

Complex patterns of speciation in cosmopolitan “rock posy” lichens – Discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota)

(2011) Steven D. Leavitt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Congruent Genetic Structure in the Lichen-Forming FungusLobaria pulmonariaand Its Green-Algal Photobiont

(2011) Silke Werth et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Align or not to align? Resolving species complexes within the Caloplaca saxicola group as a case study

(2011) Ester Gaya et al.   MYCOLOGIA

Fungal and algal gene expression in early developmental stages of lichen-symbiosis

(2011) Suzanne Joneson et al.   MYCOLOGIA

Phenotypical plasticity and homoplasy complicate species delimitation in the Cladonia gracilis group (Cladoniaceae, Ascomycota)

(2011) Raquel Pino-Bodas et al.   ORGANISMS DIVERSITY & EVOLUTION

New paradigms for the evolution of beneficial infections

(2011) Joel L. Sachs et al.   TRENDS IN ECOLOGY & EVOLUTION

Two Trebouxia algae with different physiological performances are ever-present in lichen thalli of Ramalina farinacea. Coexistence versus Competition?

(2010) Leonardo M. Casano et al.   ENVIRONMENTAL MICROBIOLOGY

Multiple origins of high reciprocal symbiotic specificity at an intercontinental spatial scale among gelatinous lichens (Collemataceae, Lecanoromycetes)

(2010) Mónica A.G. Otálora et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Lichens

(2009) François Lutzoni et al.   CURRENT BIOLOGY

ASSESSING REPRODUCTIVE ISOLATION IN HIGHLY DIVERSE COMMUNITIES OF THE LICHEN-FORMING FUNGAL GENUSPELTIGERA

(2009) Heath E. O'Brien et al.   EVOLUTION

Bayesian Inference of Species Trees from Multilocus Data

(2009) J. Heled et al.   MOLECULAR BIOLOGY AND EVOLUTION

Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates

(2009) M. E. Alfaro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PHYLOGENETIC PATTERNS AMONGNOSTOCCYANOBIONTS WITHIN BI- AND TRIPARTITE LICHENS OF THE GENUSPANNARIA1

(2008) Arve Elvebakk et al.   JOURNAL OF PHYCOLOGY

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY