A common class of transcripts with 5′-intron depletion, distinct early coding sequence features, andN1-methyladenosine modification
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A common class of transcripts with 5′-intron depletion, distinct early coding sequence features, andN1-methyladenosine modification
Authors
Keywords
-
Journal
RNA
Volume 23, Issue 3, Pages 270-283
Publisher
Cold Spring Harbor Laboratory
Online
2016-12-20
DOI
10.1261/rna.059105.116
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Molecular basis for cytoplasmic RNA surveillance by uridylation‐triggered decay in Drosophila
- (2016) Madalena M Reimão‐Pinto et al. EMBO JOURNAL
- TUT‐DIS3L2 is a mammalian surveillance pathway for aberrant structured non‐coding RNAs
- (2016) Dmytro Ustianenko et al. EMBO JOURNAL
- Transcriptome-wide mapping reveals reversible and dynamic N1-methyladenosine methylome
- (2016) Xiaoyu Li et al. Nature Chemical Biology
- Perlman syndrome nuclease DIS3L2 controls cytoplasmic non-coding RNAs and provides surveillance pathway for maturing snRNAs
- (2016) Anna Łabno et al. NUCLEIC ACIDS RESEARCH
- Identification of factors involved in target RNA-directed microRNA degradation
- (2016) Gabrielle Haas et al. NUCLEIC ACIDS RESEARCH
- HNRNPA2B1 Is a Mediator of m6A-Dependent Nuclear RNA Processing Events
- (2015) Claudio R. Alarcón et al. CELL
- N6-methyladenosine Modulates Messenger RNA Translation Efficiency
- (2015) Xiao Wang et al. CELL
- Selective Suppression of the Splicing-Mediated MicroRNA Pathway by the Terminal Uridyltransferase Tailor
- (2015) Diane Bortolamiol-Becet et al. MOLECULAR CELL
- Diversity and selectivity in mRNA translation on the endoplasmic reticulum
- (2015) David W. Reid et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Comment on "Principles of ER cotranslational translocation revealed by proximity-specific ribosome profiling"
- (2015) D. W. Reid et al. SCIENCE
- Apoptosis Triggers Specific, Rapid, and Global mRNA Decay with 3′ Uridylated Intermediates Degraded by DIS3L2
- (2015) Marshall P. Thomas et al. Cell Reports
- Uridylation by TUT4 and TUT7 Marks mRNA for Degradation
- (2014) Jaechul Lim et al. CELL
- Mammalian WTAP is a regulatory subunit of the RNA N6-methyladenosine methyltransferase
- (2014) Xiao-Li Ping et al. CELL RESEARCH
- Deep Sequencing Shows Multiple Oligouridylations Are Required for 3′ to 5′ Degradation of Histone mRNAs on Polyribosomes
- (2014) Michael K. Slevin et al. MOLECULAR CELL
- Diversity and dynamics of the Drosophila transcriptome
- (2014) James B. Brown et al. NATURE
- Rate-Limiting Steps in Yeast Protein Translation
- (2013) Premal Shah et al. CELL
- Exonuclease hDIS3L2 specifies an exosome-independent 3′-5′ degradation pathway of human cytoplasmic mRNA
- (2013) Michal Lubas et al. EMBO JOURNAL
- The exoribonuclease Dis3L2 defines a novel eukaryotic RNA degradation pathway
- (2013) Michal Malecki et al. EMBO JOURNAL
- Highly Improved Gene Targeting by Germline-Specific Cas9 Expression in Drosophila
- (2013) Shu Kondo et al. GENETICS
- RIPiT-Seq: A high-throughput approach for footprinting RNA:protein complexes
- (2013) Guramrit Singh et al. METHODS
- A role for the Perlman syndrome exonuclease Dis3l2 in the Lin28–let-7 pathway
- (2013) Hao-Ming Chang et al. NATURE
- N6-methyladenosine-dependent regulation of messenger RNA stability
- (2013) Xiao Wang et al. NATURE
- The nuclear cap-binding complex interacts with the U4/U6{middle dot}U5 tri-snRNP and promotes spliceosome assembly in mammalian cells
- (2013) M. Pabis et al. RNA
- Mammalian DIS3L2 exoribonuclease targets the uridylated precursors of let-7 miRNAs
- (2013) D. Ustianenko et al. RNA
- Loss of a Conserved tRNA Anticodon Modification Perturbs Cellular Signaling
- (2013) Boris Zinshteyn et al. PLoS Genetics
- ALREX-elements and introns: two identity elements that promote mRNA nuclear export
- (2013) Alexander F. Palazzo et al. Wiley Interdisciplinary Reviews-RNA
- The Cellular EJC Interactome Reveals Higher-Order mRNP Structure and an EJC-SR Protein Nexus
- (2012) Guramrit Singh et al. CELL
- Multiclass Imbalance Problems: Analysis and Potential Solutions
- (2012) Shuo Wang et al. IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART B-CYBERNETICS
- Germline mutations in DIS3L2 cause the Perlman syndrome of overgrowth and Wilms tumor susceptibility
- (2012) Dewi Astuti et al. NATURE GENETICS
- Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
- (2012) Christine Vogel et al. NATURE REVIEWS GENETICS
- Endoplasmic reticulum–mitochondria contacts: function of the junction
- (2012) Ashley A. Rowland et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- NMD: a multifaceted response to premature translational termination
- (2012) Stephanie Kervestin et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Lin28-mediated control of let-7 microRNA expression by alternative TUTases Zcchc11 (TUT4) and Zcchc6 (TUT7)
- (2012) J. E. Thornton et al. RNA
- Zcchc11 Uridylates Mature miRNAs to Enhance Neonatal IGF-1 Expression, Growth, and Survival
- (2012) Matthew R. Jones et al. PLoS Genetics
- Genome-wide functional analysis of human 5' untranslated region introns
- (2012) Can Cenik et al. GENOME BIOLOGY
- A Protein Complex Network of Drosophila melanogaster
- (2011) K.G. Guruharsha et al. CELL
- mRNA helicases: the tacticians of translational control
- (2011) Armen Parsyan et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- g:Profiler—a web server for functional interpretation of gene lists (2011 update)
- (2011) Jüri Reimand et al. NUCLEIC ACIDS RESEARCH
- From RNA-seq reads to differential expression results
- (2011) Alicia Oshlack et al. GENOME BIOLOGY
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- An Evolutionarily Conserved Mechanism for Controlling the Efficiency of Protein Translation
- (2010) Tamir Tuller et al. CELL
- MicroRNA Biogenesis via Splicing and Exosome-Mediated Trimming in Drosophila
- (2010) Alex S. Flynt et al. MOLECULAR CELL
- Drosophila melanogaster Dis3 N-terminal domains are required for ribonuclease activities, nuclear localization and exosome interactions
- (2010) Megan Mamolen et al. NUCLEIC ACIDS RESEARCH
- Target RNA-Directed Trimming and Tailing of Small Silencing RNAs
- (2010) S. L. Ameres et al. SCIENCE
- Pre-mRNA Processing Reaches Back toTranscription and Ahead to Translation
- (2009) Melissa J. Moore et al. CELL
- The Many Pathways of RNA Degradation
- (2009) Jonathan Houseley et al. CELL
- TUT4 in Concert with Lin28 Suppresses MicroRNA Biogenesis through Pre-MicroRNA Uridylation
- (2009) Inha Heo et al. CELL
- Decapping is preceded by 3′ uridylation in a novel pathway of bulk mRNA turnover
- (2009) Olivia S Rissland et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Lin28 recruits the TUTase Zcchc11 to inhibit let-7 maturation in mouse embryonic stem cells
- (2009) John P Hagan et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Discovery of Regulatory Elements is Improved by a Discriminatory Approach
- (2009) Eivind Valen et al. PLoS Computational Biology
- Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5' to 3' and 3' to 5'
- (2008) T. E. Mullen et al. GENES & DEVELOPMENT
- The Drosophila hairpin RNA pathway generates endogenous short interfering RNAs
- (2008) Katsutomo Okamura et al. NATURE
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now