Regulation of genetic flux between bacteria by restriction–modification systems
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Regulation of genetic flux between bacteria by restriction–modification systems
Authors
Keywords
-
Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 113, Issue 20, Pages 5658-5663
Publisher
Proceedings of the National Academy of Sciences
Online
2016-05-03
DOI
10.1073/pnas.1603257113
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
- (2015) Xavier Didelot et al. PLoS Computational Biology
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R
- (2014) Bastian Pfeifer et al. MOLECULAR BIOLOGY AND EVOLUTION
- Bacterial transformation: distribution, shared mechanisms and divergent control
- (2014) Calum Johnston et al. NATURE REVIEWS MICROBIOLOGY
- The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts
- (2014) Pedro H. Oliveira et al. NUCLEIC ACIDS RESEARCH
- Type II restriction endonucleases—a historical perspective and more
- (2014) Alfred Pingoud et al. NUCLEIC ACIDS RESEARCH
- Diversification of bacterial genome content through distinct mechanisms over different timescales
- (2014) Nicholas J. Croucher et al. Nature Communications
- Diverse Functions of Restriction-Modification Systems in Addition to Cellular Defense
- (2013) K. Vasu et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Impact of target site distribution for Type I restriction enzymes on the evolution of methicillin-resistant Staphylococcus aureus (MRSA) populations
- (2013) Gareth A. Roberts et al. NUCLEIC ACIDS RESEARCH
- To be or not to be: regulation of restriction–modification systems and other toxin–antitoxin systems
- (2013) Iwona Mruk et al. NUCLEIC ACIDS RESEARCH
- Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer
- (2012) Yuri I Wolf et al. Biology Direct
- The Adaptation of Temperate Bacteriophages to Their Host Genomes
- (2012) Louis-Marie Bobay et al. MOLECULAR BIOLOGY AND EVOLUTION
- Context-dependent conservation of DNA methyltransferases in bacteria
- (2012) Aswin Sai Narain Seshasayee et al. NUCLEIC ACIDS RESEARCH
- Promiscuous restriction is a cellular defense strategy that confers fitness advantage to bacteria
- (2012) K. Vasu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ultra-fast sequence clustering from similarity networks with SiLiX
- (2011) Vincent Miele et al. BMC BIOINFORMATICS
- Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes
- (2011) O. Popa et al. GENOME RESEARCH
- Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy
- (2011) I. Letunic et al. NUCLEIC ACIDS RESEARCH
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination
- (2011) S. Budroni et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Repertoire of ICE in Prokaryotes Underscores the Unity, Diversity, and Ubiquity of Conjugation
- (2011) Julien Guglielmini et al. PLoS Genetics
- Recombination and Population Structure in Salmonella enterica
- (2011) Xavier Didelot et al. PLoS Genetics
- Horizontal Transfer, Not Duplication, Drives the Expansion of Protein Families in Prokaryotes
- (2011) Todd J. Treangen et al. PLoS Genetics
- Count: evolutionary analysis of phylogenetic profiles with parsimony and likelihood
- (2010) M. Csuos BIOINFORMATICS
- phangorn: phylogenetic analysis in R
- (2010) Klaus Peter Schliep BIOINFORMATICS
- Widespread homologous recombination within and between Streptomyces species
- (2010) James R Doroghazi et al. ISME Journal
- Bacteriophage resistance mechanisms
- (2010) Simon J. Labrie et al. NATURE REVIEWS MICROBIOLOGY
- A type III-like restriction endonuclease functions as a major barrier to horizontal gene transfer in clinical Staphylococcus aureus strains
- (2010) A. R. Corvaglia et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- Inference and Characterization of Horizontally Transferred Gene Families Using Stochastic Mapping
- (2009) O. Cohen et al. MOLECULAR BIOLOGY AND EVOLUTION
- SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building
- (2009) M. Gouy et al. MOLECULAR BIOLOGY AND EVOLUTION
- REBASE—a database for DNA restriction and modification: enzymes, genes and genomes
- (2009) Richard J. Roberts et al. NUCLEIC ACIDS RESEARCH
- The impact of long-distance horizontal gene transfer on prokaryotic genome size
- (2009) O. X. Cordero et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Network analyses structure genetic diversity in independent genetic worlds
- (2009) S. Halary et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths
- (2009) Marie Touchon et al. PLoS Genetics
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now