ThaleMine: A Warehouse for Arabidopsis Data Integration and Discovery
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
ThaleMine: A Warehouse for Arabidopsis Data Integration and Discovery
Authors
Keywords
-
Journal
PLANT AND CELL PHYSIOLOGY
Volume -, Issue -, Pages pcw200
Publisher
Oxford University Press (OUP)
Online
2016-11-17
DOI
10.1093/pcp/pcw200
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Araport11: a complete reannotation of theArabidopsis thalianareference genome
- (2017) Chia-Yi Cheng et al. PLANT JOURNAL
- 1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana
- (2016) Carlos Alonso-Blanco et al. CELL
- Sustainable funding for biocuration: The Arabidopsis Information Resource (TAIR) as a case study of a subscription-based funding model
- (2016) Leonore Reiser et al. Database-The Journal of Biological Databases and Curation
- The FAIR Guiding Principles for scientific data management and stewardship
- (2016) Mark D. Wilkinson et al. Scientific Data
- Cross-organism analysis using InterMine
- (2015) Rachel Lyne et al. GENESIS
- ZFIN, The zebrafish model organism database: Updates and new directions
- (2015) Leyla Ruzicka et al. GENESIS
- The arabidopsis information resource: Making and mining the “gold standard” annotated reference plant genome
- (2015) Tanya Z. Berardini et al. GENESIS
- MouseMine: a new data warehouse for MGI
- (2015) H. Motenko et al. MAMMALIAN GENOME
- WormBase 2016: expanding to enable helminth genomic research
- (2015) Kevin L. Howe et al. NUCLEIC ACIDS RESEARCH
- KEGG as a reference resource for gene and protein annotation
- (2015) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Legume information system (LegumeInfo.org): a key component of a set of federated data resources for the legume family
- (2015) Sudhansu Dash et al. NUCLEIC ACIDS RESEARCH
- PANTHER version 10: expanded protein families and functions, and analysis tools
- (2015) Huaiyu Mi et al. NUCLEIC ACIDS RESEARCH
- HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks
- (2015) Xinbin Dai et al. PLANT AND CELL PHYSIOLOGY
- ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression
- (2015) Yuichi Aoki et al. PLANT AND CELL PHYSIOLOGY
- Gene Ontology Consortium: going forward
- (2014) NUCLEIC ACIDS RESEARCH
- Araport: the Arabidopsis Information Portal
- (2014) Vivek Krishnakumar et al. NUCLEIC ACIDS RESEARCH
- InterMine: extensive web services for modern biology
- (2014) Alex Kalderimis et al. NUCLEIC ACIDS RESEARCH
- The BioGRID interaction database: 2015 update
- (2014) Andrew Chatr-aryamontri et al. NUCLEIC ACIDS RESEARCH
- The InterPro protein families database: the classification resource after 15 years
- (2014) Alex Mitchell et al. NUCLEIC ACIDS RESEARCH
- The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease
- (2014) Mary Shimoyama et al. NUCLEIC ACIDS RESEARCH
- UniProt: a hub for protein information
- (2014) NUCLEIC ACIDS RESEARCH
- MTGD: The Medicago truncatula Genome Database
- (2014) Vivek Krishnakumar et al. PLANT AND CELL PHYSIOLOGY
- Genomic Signatures of Specialized Metabolism in Plants
- (2014) L. Chae et al. SCIENCE
- The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases
- (2013) Sandra Orchard et al. NUCLEIC ACIDS RESEARCH
- Activities at the Universal Protein Resource (UniProt)
- (2013) NUCLEIC ACIDS RESEARCH
- InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data
- (2012) Richard N. Smith et al. BIOINFORMATICS
- YeastMine—an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit
- (2012) Rama Balakrishnan et al. Database-The Journal of Biological Databases and Curation
- D³ Data-Driven Documents
- (2011) M. Bostock et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- Phytozome: a comparative platform for green plant genomics
- (2011) David M. Goodstein et al. NUCLEIC ACIDS RESEARCH
- modMine: flexible access to modENCODE data
- (2011) S. Contrino et al. NUCLEIC ACIDS RESEARCH
- The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools
- (2011) Philippe Lamesch et al. NUCLEIC ACIDS RESEARCH
- ePlant and the 3D Data Display Initiative: Integrative Systems Biology on the World Wide Web
- (2011) Geoffrey Fucile et al. PLoS One
- Entrez Gene: gene-centered information at NCBI
- (2010) D. Maglott et al. NUCLEIC ACIDS RESEARCH
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now