Imagining Sisyphus happy: DNA barcoding and the unnamed majority

Large-Scale Biomonitoring of Remote and Threatened Ecosystems via High-Throughput Sequencing

(2015) Joel F. Gibson et al.   PLoS One

Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems

(2014) Delphine Lallias et al.   ISME Journal

Type material in the NCBI Taxonomy Database

(2014) Scott Federhen   NUCLEIC ACIDS RESEARCH

A Streamlined System for Species Diagnosis in Caenorhabditis (Nematoda: Rhabditidae) with Name Designations for 15 Distinct Biological Species

(2014) Marie-Anne Félix et al.   PLoS One

Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project

(2014) Nikos C. Kyrpides et al.   Standards in Genomic Sciences

Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains

(2014) Nikos C. Kyrpides et al.   PLOS BIOLOGY

The nematodePristionchus pacificusas a model system for integrative studies in evolutionary biology

(2013) Ralf J. Sommer et al.   MOLECULAR ECOLOGY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System

(2013) Sujeevan Ratnasingham et al.   PLoS One

Mitochondrial barcodes are diagnostic of shared refugia but not species in hybridizing oak gallwasps

(2012) JAMES A. NICHOLLS et al.   MOLECULAR ECOLOGY

Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next-generation DNA sequencing

(2012) DONALD J. BAIRD et al.   MOLECULAR ECOLOGY

Investigating the ecology and evolution of cryptic marine nematode species through quantitative real-time PCR of the ribosomal ITS region

(2012) S. DERYCKE et al.   Molecular Ecology Resources

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses

(2012) V. G. Fonseca et al.   NUCLEIC ACIDS RESEARCH

Dramatic Shifts in Benthic Microbial Eukaryote Communities following the Deepwater Horizon Oil Spill

(2012) Holly M. Bik et al.   PLoS One

Low endemism, continued deep-shallow interchanges, and evidence for cosmopolitan distributions in free-living marine nematodes (order Enoplida)

(2011) Holly M Bik et al.   BMC EVOLUTIONARY BIOLOGY

Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

(2011) Mehrdad Hajibabaei et al.   PLoS One

How Many Species Are There on Earth and in the Ocean?

(2011) Camilo Mora et al.   PLOS BIOLOGY

Moving towards a complete molecular framework of the Nematoda: a focus on the Enoplida and early-branching clades

(2010) Holly M Bik et al.   BMC EVOLUTIONARY BIOLOGY

Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises

(2010) S. CREER et al.   MOLECULAR ECOLOGY

Tropical Arthropod Species, More or Less?

(2010) R. M. May   SCIENCE

Second-generation environmental sequencing unmasks marine metazoan biodiversity

(2010) Vera G. Fonseca et al.   Nature Communications

Accurate determination of microbial diversity from 454 pyrosequencing data

(2009) Christopher Quince et al.   NATURE METHODS

The nematodes of the Thames estuary: Assemblage structure and biodiversity, with a test of Attrill's linear model

(2008) T.J. Ferrero et al.   ESTUARINE COASTAL AND SHELF SCIENCE