G-register exchange dynamics in guanine quadruplexes

The deconvolution of differential scanning calorimetry unfolding transitions

(2015) Charles H. Spink   METHODS

G-quadruplexes with (4n - 1) guanines in the G-tetrad core: formation of a G-triad·water complex and implication for small-molecule binding

(2015) Brahim Heddi et al.   NUCLEIC ACIDS RESEARCH

Ergodic theorem, ergodic theory, and statistical mechanics

(2015) Calvin C. Moore   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Guanine-vacancy–bearing G-quadruplexes responsive to guanine derivatives

(2015) Xin-min Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Telomeric G-quadruplexes are a substrate and site of localization for human telomerase

(2015) Aaron L. Moye et al.   Nature Communications

A Role for the Fifth G-Track in G-Quadruplex Forming Oncogene Promoter Sequences during Oxidative Stress: Do These “Spare Tires” Have an Evolved Function?

(2015) Aaron M. Fleming et al.   ACS Central Science

DNA and RNA Quadruplex-Binding Proteins

(2014) Václav Brázda et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Folding and Unfolding Pathways of the Human Telomeric G-Quadruplex

(2014) Robert D. Gray et al.   JOURNAL OF MOLECULAR BIOLOGY

The Major G-Quadruplex Formed in the Human BCL-2 Proximal Promoter Adopts a Parallel Structure with a 13-nt Loop in K+ Solution

(2014) Prashansa Agrawal et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The ensemble nature of allostery

(2014) Hesam N. Motlagh et al.   NATURE

G-quadruplexes regulate Epstein-Barr virus–encoded nuclear antigen 1 mRNA translation

(2014) Pierre Murat et al.   Nature Chemical Biology

Site-specific fluorescence dynamics in an RNA ‘thermometer’ reveals the role of ribosome binding in its temperature-sensitive switch function

(2014) Satya Narayan et al.   NUCLEIC ACIDS RESEARCH

G-quadruplex conformation and dynamics are determined by loop length and sequence

(2014) Ramreddy Tippana et al.   NUCLEIC ACIDS RESEARCH

An Improved Model for the hTERT Promoter Quadruplex

(2014) Jonathan B. Chaires et al.   PLoS One

The G-Triplex DNA

(2013) Vittorio Limongelli et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Suppression of Gene Expression by G-Quadruplexes in Open Reading Frames Depends on G-Quadruplex Stability

(2013) Tamaki Endoh et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Effect of Loops and G-Quartets on the Stability of RNA G-Quadruplexes

(2013) Satyaprakash Pandey et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Differential scanning calorimetry to investigate G-quadruplexes structural stability

(2013) Bruno Pagano et al.   METHODS

Stability of RNA quadruplex in open reading frame determines proteolysis of human estrogen receptor α

(2013) Tamaki Endoh et al.   NUCLEIC ACIDS RESEARCH

Structural dynamics of possible late-stage intermediates in folding of quadruplex DNA studied by molecular simulations

(2013) P. Stadlbauer et al.   NUCLEIC ACIDS RESEARCH

Solution structure of the major G-quadruplex formed in the human VEGF promoter in K+: insights into loop interactions of the parallel G-quadruplexes

(2013) Prashansa Agrawal et al.   NUCLEIC ACIDS RESEARCH

Possible Regulatory Roles of Promoter G-Quadruplexes in Cardiac Function-Related Genes – Human TnIc as a Model

(2013) Wenhua Zhou et al.   PLoS One

Stability and Structure of Long Intramolecular G-Quadruplexes

(2012) Linda Payet et al.   BIOCHEMISTRY

Energetic Basis of Human Telomeric DNA Folding into G-Quadruplex Structures

(2012) Matjaž Bončina et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Populated Intermediates in the Thermal Unfolding of the Human Telomeric Quadruplex

(2012) Robert D. Gray et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

NMR spectroscopy of G-quadruplexes

(2012) Michael Adrian et al.   METHODS

DNA secondary structures: stability and function of G-quadruplex structures

(2012) Matthew L. Bochman et al.   NATURE REVIEWS GENETICS

Structure and mechanical properties of the ribosomal L1 stalk three-way junction

(2012) Kamila Réblová et al.   NUCLEIC ACIDS RESEARCH

Computational mapping reveals dramatic effect of Hoogsteen breathing on duplex DNA reactivity with formaldehyde

(2012) Tanggis Bohnuud et al.   NUCLEIC ACIDS RESEARCH

Topological Characterization of Nucleic Acid G-Quadruplexes by UV Absorption and Circular Dichroism

(2011) Andreas Ioannis Karsisiotis et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Transcription Arrest by a G Quadruplex Forming-Trinucleotide Repeat Sequence from the Human c-myb Gene

(2011) Christopher Broxson et al.   BIOCHEMISTRY

DSC Deconvolution of the Structural Complexity of c-MYC P1 Promoter G-Quadruplexes

(2011) Jamie M. Dettler et al.   BIOPHYSICAL JOURNAL

Solution Structure of a 2:1 Quindoline–c-MYC G-Quadruplex: Insights into G-Quadruplex-Interactive Small Molecule Drug Design

(2011) Jixun Dai et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Transient Hoogsteen base pairs in canonical duplex DNA

(2011) Evgenia N. Nikolova et al.   NATURE

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?

(2011) Shankar Balasubramanian et al.   NATURE REVIEWS DRUG DISCOVERY

An RNA G-quadruplex in the 3' UTR of the proto-oncogene PIM1 represses translation

(2011) Amit Arora et al.   RNA Biology

Thermodynamic Stability and Folding Kinetics of the Major G-Quadruplex and Its Loop Isomers Formed in the Nuclease Hypersensitive Element in the Human c-Myc Promoter: Effect of Loops and Flanking Segments on the Stability of Parallel-Stranded Intramolecular G-Quadruplexes

(2010) Emmanuel Hatzakis et al.   BIOCHEMISTRY

Characterizing the Strength of Individual Hydrogen Bonds in DNA Base Pairs

(2010) Halina Szatyłowicz et al.   Journal of Chemical Information and Modeling

Coexistence of Two Distinct G-Quadruplex Conformations in the hTERT Promoter

(2010) Kah Wai Lim et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

How long is too long? Effects of loop size on G-quadruplex stability

(2010) Aurore Guédin et al.   NUCLEIC ACIDS RESEARCH

A G-Rich Sequence within thec-kitOncogene Promoter Forms a Parallel G-Quadruplex Having Asymmetric G-Tetrad Dynamics

(2009) Shang-Te Danny Hsu et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

GiardiaTelomeric Sequence d(TAGGG)4Forms Two Intramolecular G-Quadruplexes in K+Solution: Effect of Loop Length and Sequence on the Folding Topology

(2009) Lanying Hu et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Structure of the Human Telomere in K+Solution: A Stable Basket-Type G-Quadruplex with Only Two G-Tetrad Layers

(2009) Kah Wai Lim et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures

(2009) Zhenjiang Zhang et al.   NUCLEIC ACIDS RESEARCH

Heat capacity changes associated with guanine quadruplex formation: An isothermal titration calorimetry study

(2008) Pinaki R. Majhi et al.   BIOPOLYMERS

G-Quadruplexes: Targets in Anticancer Drug Design

(2008) Tian-miao Ou et al.   ChemMedChem

Telomerase recruitment by the telomere end binding protein-β facilitates G-quadruplex DNA unfolding in ciliates

(2008) Katrin Paeschke et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

A thermodynamic overview of naturally occurring intramolecular DNA quadruplexes

(2008) Niti Kumar et al.   NUCLEIC ACIDS RESEARCH

Kinetics and mechanism of K+- and Na+-induced folding of models of human telomeric DNA into G-quadruplex structures

(2008) Robert D. Gray et al.   NUCLEIC ACIDS RESEARCH