Elements of biological oscillations in time and space

Collective Space-Sensing Coordinates Pattern Scaling in Engineered Bacteria

(2016) Yangxiaolu Cao et al.   CELL

Cell cycle Start is coupled to entry into the yeast metabolic cycle across diverse strains and growth rates

(2016) Anthony J. Burnetti et al.   MOLECULAR BIOLOGY OF THE CELL

Synchronous long-term oscillations in a synthetic gene circuit

(2016) Laurent Potvin-Trottier et al.   NATURE

Synchronized cycles of bacterial lysis for in vivo delivery

(2016) M. Omar Din et al.   NATURE

Processing Oscillatory Signals by Incoherent Feedforward Loops

(2016) Carolyn Zhang et al.   PLoS Computational Biology

NF-κB oscillations translate into functionally related patterns of gene expression

(2016) Samuel Zambrano et al.   eLife

A noisy linear map underlies oscillations in cell size and gene expression in bacteria

(2015) Yu Tanouchi et al.   NATURE

Redox rhythm reinforces the circadian clock to gate immune response

(2015) Mian Zhou et al.   NATURE

Metabolic co-dependence gives rise to collective oscillations within biofilms

(2015) Jintao Liu et al.   NATURE

Emergent genetic oscillations in a synthetic microbial consortium

(2015) Y. Chen et al.   SCIENCE

Bacterial Swarms Recruit Cargo Bacteria To Pave the Way in Toxic Environments

(2015) Alin Finkelshtein et al.   mBio

Sources of Variability in a Synthetic Gene Oscillator

(2015) Alan Veliz-Cuba et al.   PLoS Computational Biology

Coordinating Bacterial Cell Division with Nutrient Availability: a Role for Glycolysis

(2014) L. G. Monahan et al.   mBio

Modeling Gene Expression in Time and Space

(2013) Pau Rué et al.   Annual Review of Biophysics

The bacterial Min system

(2013) Veronica Wells Rowlett et al.   CURRENT BIOLOGY

Temporal control of self-organized pattern formation without morphogen gradients in bacteria

(2013) S. Payne et al.   Molecular Systems Biology

Noise induced oscillations and coherence resonance in a generic model of the nonisothermal chemical oscillator

(2013) David S. A. Simakov et al.   Scientific Reports

Transcription Factor Oscillations Induce Differential Gene Expressions

(2012) Keng Boon Wee et al.   BIOPHYSICAL JOURNAL

Patterning embryos with oscillations: structure, function and dynamics of the vertebrate segmentation clock

(2012) A. C. Oates et al.   DEVELOPMENT

Effect of positive feedback loops on the robustness of oscillations in the network of cyclin-dependent kinases driving the mammalian cell cycle

(2012) Claude Gérard et al.   FEBS Journal

p53 Dynamics Control Cell Fate

(2012) J. E. Purvis et al.   SCIENCE

Turing's model for biological pattern formation and the robustness problem

(2012) P. K. Maini et al.   Interface Focus

Topology and Dynamics of the Zebrafish Segmentation Clock Core Circuit

(2012) Christian Schröter et al.   PLOS BIOLOGY

Modeling the Cell Cycle: Why Do Certain Circuits Oscillate?

(2011) James E. Ferrell et al.   CELL

Synthetic in vitro transcriptional oscillators

(2011) J. Kim et al.   Molecular Systems Biology

A sensing array of radically coupled genetic ‘biopixels’

(2011) Arthur Prindle et al.   NATURE

Temporal and spatial oscillations in bacteria

(2011) Peter Lenz et al.   NATURE REVIEWS MICROBIOLOGY

Sequential Establishment of Stripe Patterns in an Expanding Cell Population

(2011) C. Liu et al.   SCIENCE

A synchronized quorum of genetic clocks

(2010) Tal Danino et al.   NATURE

The Contributions of Interlocking Loops and Extensive Nonlinearity to the Properties of Circadian Clock Models

(2010) Treenut Saithong et al.   PLoS One

The Onset of Collective Behavior in Social Amoebae

(2010) T. Gregor et al.   SCIENCE

Reaction-Diffusion Model as a Framework for Understanding Biological Pattern Formation

(2010) S. Kondo et al.   SCIENCE

The Origins of Time-Delay in Template Biopolymerization Processes

(2010) Luis Mier-y-Terán-Romero et al.   PLoS Computational Biology

Developmental control of segment numbers in vertebrates

(2009) Céline Gomez et al.   JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION

A tunable synthetic mammalian oscillator

(2009) Marcel Tigges et al.   NATURE

Delay-Induced Degrade-and-Fire Oscillations in Small Genetic Circuits

(2009) William Mather et al.   PHYSICAL REVIEW LETTERS

Interactions between zebrafish pigment cells responsible for the generation of Turing patterns

(2009) A. Nakamasu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Oscillating signaling pathways during embryonic development

(2008) Alexander Aulehla et al.   CURRENT OPINION IN CELL BIOLOGY

Intron length increases oscillatory periods of gene expression in animal cells

(2008) I. A. Swinburne et al.   GENES & DEVELOPMENT

Probing the Relative Importance of Molecular Oscillations in the Circadian Clock

(2008) X. Zheng et al.   GENETICS

A fast, robust and tunable synthetic gene oscillator

(2008) Jesse Stricker et al.   NATURE

Design principles of biochemical oscillators

(2008) Béla Novák et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Robust, Tunable Biological Oscillations from Interlinked Positive and Negative Feedback Loops

(2008) T. Y.-C. Tsai et al.   SCIENCE

Spatial Regulators for Bacterial Cell Division Self-Organize into Surface Waves in Vitro

(2008) M. Loose et al.   SCIENCE

The interaction of parasites and resources cause crashes in a wild mouse population

(2007) Amy B. Pedersen et al.   JOURNAL OF ANIMAL ECOLOGY