Functional responses to deforestation in fish communities inhabiting neotropical streams and rivers

Deforestation strengthens environmental filtering and competitive exclusion in Neotropical streams and rivers

(2023) Isabel Cantera et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Meta‐analyses of environmental DNA downstream transport and deposition in relation to hydrogeography in riverine environments

(2022) Toshiaki Jo et al.   FRESHWATER BIOLOGY

Fishing for fish environmental DNA ( eDNA ): ecological applications, methodological considerations, surveying designs, and ways forward

(2022) Meng Yao et al.   MOLECULAR ECOLOGY

Low level of anthropization linked to harsh vertebrate biodiversity declines in Amazonia

(2022) Isabel Cantera et al.   Nature Communications

Environmental DNA reveals a mismatch between diversity facets of Amazonian fishes in response to contrasting geographical, environmental and anthropogenic effects

(2022) Opale Coutant et al.   GLOBAL CHANGE BIOLOGY

Human impacts on global freshwater fish biodiversity

(2021) Guohuan Su et al.   SCIENCE

Meta‐analysis shows that environmental DNA outperforms traditional surveys, but warrants better reporting standards

(2021) Julija Fediajevaite et al.   Ecology and Evolution

Erosion of global functional diversity across the tree of life

(2021) Carlos P. Carmona et al.   Science Advances

Characterizing the spatial signal of environmental DNA in river systems using a community ecology approach

(2021) Isabel Cantera et al.   Molecular Ecology Resources

Integrated terrestrial-freshwater planning doubles conservation of tropical aquatic species

(2020) Cecília G. Leal et al.   SCIENCE

Optimizing environmental DNA sampling effort for fish inventories in tropical streams and rivers

(2019) Isabel Cantera et al.   Scientific Reports

Measuring global fish species richness with eDNA metabarcoding

(2019) Christopher L. Jerde et al.   Molecular Ecology Resources

Trait structure and redundancy determine sensitivity to disturbance in marine fish communities

(2019) Matthew McLean et al.   GLOBAL CHANGE BIOLOGY

Phylogenetic, functional, and taxonomic richness have both positive and negative effects on ecosystem multifunctionality

(2019) Yoann Le Bagousse-Pinguet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The future of fish‐based ecological assessment of European rivers: from traditional EU Water Framework Directive compliant methods to eDNA metabarcoding‐based approaches

(2019) Didier Pont et al.   JOURNAL OF FISH BIOLOGY

Global humid tropics forest structural condition and forest structural integrity maps

(2019) Andrew Hansen et al.   Scientific Data

Threshold responses of Amazonian stream fishes to timing and extent of deforestation

(2018) Gabriel L. Brejão et al.   CONSERVATION BIOLOGY

Comparing local- and regional-scale estimations of the diversity of stream fish using eDNA metabarcoding and conventional observation methods

(2018) Hikaru Nakagawa et al.   FRESHWATER BIOLOGY

Unlocking biodiversity and conservation studies in high-diversity environments using environmental DNA (eDNA): A test with Guianese freshwater fishes

(2018) Kévin Cilleros et al.   Molecular Ecology Resources

Non-native species led to marked shifts in functional diversity of the world freshwater fish faunas

(2018) Aurèle Toussaint et al.   ECOLOGY LETTERS

Environmental DNA reveals quantitative patterns of fish biodiversity in large rivers despite its downstream transportation

(2018) Didier Pont et al.   Scientific Reports

Morphological diversity of freshwater fishes differs between realms, but morphologically extreme species are widespread

(2018) Guohuan Su et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Functional biodiversity loss along natural CO2 gradients

(2018) Nuria Teixidó et al.   Nature Communications

Gold-rush in a forested El Dorado: deforestation leakages and the need for regional cooperation

(2017) Camille Dezécache et al.   Environmental Research Letters

Disentangling spatial and environmental determinants of fish species richness and assemblage structure in Neotropical rainforest streams

(2017) Kévin Cilleros et al.   FRESHWATER BIOLOGY

Taxonomic and functional diversity patterns reveal different processes shaping European and Amazonian stream fish assemblages

(2016) Kévin Cilleros et al.   JOURNAL OF BIOGEOGRAPHY

Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding

(2016) Alice Valentini et al.   MOLECULAR ECOLOGY

Unexpected high vulnerability of functions in wilderness areas: evidence from coral reef fishes

(2016) Stéphanie D'agata et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Environmental DNA reveals that rivers are conveyer belts of biodiversity information

(2016) Kristy Deiner et al.   Nature Communications

Spatial Representativeness of Environmental DNA Metabarcoding Signal for Fish Biodiversity Assessment in a Natural Freshwater System

(2016) Raphaël Civade et al.   PLoS One

Effect of reduced impact logging and small-scale mining disturbances on Neotropical stream fish assemblages

(2015) Luc Allard et al.   AQUATIC SCIENCES

Using eDNA to develop a national citizen science-based monitoring programme for the great crested newt (Triturus cristatus)

(2015) Jeremy Biggs et al.   BIOLOGICAL CONSERVATION

Large-scale degradation of Amazonian freshwater ecosystems

(2015) Leandro Castello et al.   GLOBAL CHANGE BIOLOGY

How many dimensions are needed to accurately assess functional diversity? A pragmatic approach for assessing the quality of functional spaces

(2015) Eva Maire et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

obitools: aunix-inspired software package for DNA metabarcoding

(2015) Frédéric Boyer et al.   Molecular Ecology Resources

Environmental Conditions Influence eDNA Persistence in Aquatic Systems

(2014) Matthew A. Barnes et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Invertebrate communities delineate hydro-ecoregions and respond to anthropogenic disturbance in East-Amazonian streams

(2014) Nicolas Dedieu et al.   HYDROBIOLOGIA

Physical habitat and water chemistry changes induced by logging and gold mining in French Guiana streams

(2014) N. Dedieu et al.   Knowledge and Management of Aquatic Ecosystems

Distance, flow and PCR inhibition: eDNA dynamics in two headwater streams

(2014) Stephen F. Jane et al.   Molecular Ecology Resources

Functional over-redundancy and high functional vulnerability in global fish faunas on tropical reefs

(2014) D. Mouillot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional redundancy and stability in plant communities

(2013) Valério D. Pillar et al.   JOURNAL OF VEGETATION SCIENCE

High-Resolution Global Maps of 21st-Century Forest Cover Change

(2013) M. C. Hansen et al.   SCIENCE

The vulnerability of Amazon freshwater ecosystems

(2013) Leandro Castello et al.   Conservation Letters

Response diversity determines the resilience of ecosystems to environmental change

(2012) Akira S. Mori et al.   BIOLOGICAL REVIEWS

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Biodiversity loss and its impact on humanity

(2012) Bradley J. Cardinale et al.   NATURE

The Functions of Biological Diversity in an Age of Extinction

(2012) S. Naeem et al.   SCIENCE

The return of the variance: intraspecific variability in community ecology

(2012) Cyrille Violle et al.   TRENDS IN ECOLOGY & EVOLUTION

A functional approach reveals community responses to disturbances

(2012) David Mouillot et al.   TRENDS IN ECOLOGY & EVOLUTION

State of the World's Freshwater Ecosystems: Physical, Chemical, and Biological Changes

(2011) Stephen R. Carpenter et al.   Annual Review of Environment and Resources

Small-scale gold mining erodes fish assemblage structure in small neotropical streams

(2011) Sebastien Brosse et al.   BIODIVERSITY AND CONSERVATION

Influence of small-scale gold mining on French Guiana streams: Are diatom assemblages valid disturbance sensors?

(2011) Loïc Tudesque et al.   ECOLOGICAL INDICATORS

Beyond species: functional diversity and the maintenance of ecological processes and services

(2011) Marc W. Cadotte et al.   JOURNAL OF APPLIED ECOLOGY

Has the Earth’s sixth mass extinction already arrived?

(2011) Anthony D. Barnosky et al.   NATURE

Species Redundancy and Ecosystem Reliability

(2010) Shahid Naeem   CONSERVATION BIOLOGY

Contrasting changes in taxonomic vs. functional diversity of tropical fish communities after habitat degradation

(2010) Sébastien Villéger et al.   ECOLOGICAL APPLICATIONS

Spatial mismatch and congruence between taxonomic, phylogenetic and functional diversity: the need for integrative conservation strategies in a changing world

(2010) Vincent Devictor et al.   ECOLOGY LETTERS

Global threats to human water security and river biodiversity

(2010) C. J. Vörösmarty et al.   NATURE

NEW MULTIDIMENSIONAL FUNCTIONAL DIVERSITY INDICES FOR A MULTIFACETED FRAMEWORK IN FUNCTIONAL ECOLOGY

(2008) Sébastien Villéger et al.   ECOLOGY

Loss of functional diversity under land use intensification across multiple taxa

(2008) Dan F. B. Flynn et al.   ECOLOGY LETTERS