The application of epiphenotyping approaches to DNA methylation array studies of the human placenta
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Title
The application of epiphenotyping approaches to DNA methylation array studies of the human placenta
Authors
Keywords
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Journal
Epigenetics & Chromatin
Volume 16, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2023-10-04
DOI
10.1186/s13072-023-00507-5
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Note: Only part of the references are listed.- Sex-based differences in placental DNA methylation profiles related to gestational age: an NIH ECHO meta-analysis
- (2023) Catherine M. Bulka et al. Epigenetics
- Reliability of a novel approach for reference-based cell type estimation in human placental DNA methylation studies
- (2022) Linda Dieckmann et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Getting genetic ancestry right for science and society
- (2022) Anna C. F. Lewis et al. SCIENCE
- Cell-type heterogeneity: Why we should adjust for it in epigenome and biomarker studies
- (2022) Luo Qi et al. Clinical Epigenetics
- The immune factors driving DNA methylation variation in human blood
- (2022) Jacob Bergstedt et al. Nature Communications
- Profiling placental DNA methylation associated with maternal SSRI treatment during pregnancy
- (2022) Amy M. Inkster et al. Scientific Reports
- Paternal epigenetic influences on placental health and their impacts on offspring development and disease
- (2022) Sanat S. Bhadsavle et al. Frontiers in Genetics
- Cell-specific characterization of the placental methylome
- (2021) Victor Yuan et al. BMC GENOMICS
- Race and Genetic Ancestry in Medicine — A Time for Reckoning with Racism
- (2021) Luisa N. Borrell et al. NEW ENGLAND JOURNAL OF MEDICINE
- Prenatal antidepressant exposure and sex differences in neonatal corpus callosum microstructure
- (2021) Kayleigh S. J. Campbell et al. DEVELOPMENTAL PSYCHOBIOLOGY
- An EPIC predictor of gestational age and its application to newborns conceived by assisted reproductive technologies
- (2021) Kristine L. Haftorn et al. Clinical Epigenetics
- DNA methylation-based sex classifier to predict sex and identify sex chromosome aneuploidy
- (2021) Yucheng Wang et al. BMC GENOMICS
- Identification and validation of DNA methylation changes in pre-eclampsia
- (2021) Suzan N. Almomani et al. PLACENTA
- A cross-cohort analysis of autosomal DNA methylation sex differences in the term placenta
- (2021) Amy M. Inkster et al. Biology of Sex Differences
- Sex Differences Are Here to Stay: Relevance to Prenatal Care
- (2021) Amy M. Inkster et al. Journal of Clinical Medicine
- Placental DNA methylation changes associated with maternal prepregnancy BMI and gestational weight gain
- (2020) Deepika Shrestha et al. INTERNATIONAL JOURNAL OF OBESITY
- Test-statistic inflation in methylome-wide association studies
- (2020) Jerry Guintivano et al. Epigenetics
- Evaluation of pre-processing on the meta-analysis of DNA methylation data from the Illumina HumanMethylation450 BeadChip platform
- (2020) Claudia Sala et al. PLoS One
- Ewastools: Infinium Human Methylation BeadChip pipeline for population epigenetics integrated into Galaxy
- (2020) Katarzyna Murat et al. GigaScience
- Simulating ComBat: how batch correction can lead to the systematic introduction of false positive results in DNA methylation microarray studies
- (2020) Tristan Zindler et al. BMC BIOINFORMATICS
- Origin and function of the yolk sac in primate embryogenesis
- (2020) Connor Ross et al. Nature Communications
- DNA methylation loci in placenta associated with birthweight and expression of genes relevant for early development and adult diseases
- (2020) Fasil Tekola-Ayele et al. Clinical Epigenetics
- Systematic review supports the role of DNA methylation in the pathophysiology of preeclampsia: a call for analytical and methodological standardization
- (2020) A. Cirkovic et al. Biology of Sex Differences
- DNA methylation GrimAge strongly predicts lifespan and healthspan
- (2019) Ake T. Lu et al. Aging-US
- Considerations when processing and interpreting genomics data of the placenta
- (2019) Chaini Konwar et al. PLACENTA
- Association of a placental Interleukin-6 genetic variant (rs1800796) with DNA methylation, gene expression and risk of acute chorioamnionitis
- (2019) Chaini Konwar et al. BMC Medical Genetics
- Placental epigenetic clocks: estimating gestational age using placental DNA methylation levels
- (2019) Yunsung Lee et al. Aging-US
- Smoking and pregnancy: Epigenetics and developmental origins of the metabolic syndrome
- (2019) John M. Rogers Birth Defects Research
- Accurate ethnicity prediction from placental DNA methylation data
- (2019) Victor Yuan et al. Epigenetics & Chromatin
- 1206: Gestational length variation at term by maternal race-ethnicity
- (2019) Jessica M. Page et al. AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY
- Interplay of Placental DNA Methylation and Maternal Insulin Sensitivity in Pregnancy
- (2019) Marie-France Hivert et al. DIABETES
- Genome-wide oxidative bisulfite sequencing identifies sex-specific methylation differences in the human placenta
- (2018) Sungsam Gong et al. Epigenetics
- A user's guide to the ambiguous word 'epigenetics'
- (2018) John M. Greally NATURE REVIEWS MOLECULAR CELL BIOLOGY
- The problem with using the birthweight:placental weight ratio as a measure of placental efficiency
- (2018) Julian K. Christians et al. PLACENTA
- No evidence for association of MTHFR 677C>T and 1298A>C variants with placental DNA methylation
- (2018) Giulia F. Del Gobbo et al. Clinical Epigenetics
- Epigenetic regulation of placental gene expression in transcriptional subtypes of preeclampsia
- (2018) Katherine Leavey et al. Clinical Epigenetics
- DNA methylation profiling of acute chorioamnionitis-associated placentas and fetal membranes: insights into epigenetic variation in spontaneous preterm births
- (2018) Chaini Konwar et al. Epigenetics & Chromatin
- Genetic variants influence on the placenta regulatory landscape
- (2018) Fabien Delahaye et al. PLoS Genetics
- Neighborhood characteristics influence DNA methylation of genes involved in stress response and inflammation: The Multi-Ethnic Study of Atherosclerosis
- (2017) Jennifer A. Smith et al. Epigenetics
- Mining DNA methylation alterations towards a classification of placental pathologies
- (2017) Samantha L Wilson et al. HUMAN MOLECULAR GENETICS
- Cell-type deconvolution from DNA methylation: a review of recent applications
- (2017) Alexander J. Titus et al. HUMAN MOLECULAR GENETICS
- Genome-wide methylation data mirror ancestry information
- (2017) Elior Rahmani et al. Epigenetics & Chromatin
- Sexual epigenetic dimorphism in the human placenta: implications for susceptibility during the prenatal period
- (2017) Elizabeth Martin et al. Epigenomics
- Accelerated placental aging in early onset preeclampsia pregnancies identified by DNA methylation
- (2017) Benjamin T Mayne et al. Epigenomics
- Variations in gestational length and preterm delivery by race, ethnicity and migration
- (2016) Ingvil K. Sørbye et al. BEST PRACTICE & RESEARCH CLINICAL OBSTETRICS & GYNAECOLOGY
- DNA methylation profiling in human Huntington's disease brain
- (2016) Rebecca A.G. De Souza et al. HUMAN MOLECULAR GENETICS
- Fetal growth restriction and methylation of growth-related genes in the placenta
- (2016) Xirong Xiao et al. Epigenomics
- Epigenome-wide Association Studies and the Interpretation of Disease -Omics
- (2016) Ewan Birney et al. PLoS Genetics
- The Genetic Ancestry of African Americans, Latinos, and European Americans across the United States
- (2015) Katarzyna Bryc et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Methods that remove batch effects while retaining group differences may lead to exaggerated confidence in downstream analyses
- (2015) Vegard Nygaard et al. BIOSTATISTICS
- limma powers differential expression analyses for RNA-sequencing and microarray studies
- (2015) Matthew E. Ritchie et al. NUCLEIC ACIDS RESEARCH
- QF2011: a protocol to study the effects of the Queensland flood on pregnant women, their pregnancies, and their children's early development
- (2015) Suzanne King et al. BMC Pregnancy and Childbirth
- Association of DNA methylation with age, gender, and smoking in an Arab population
- (2015) Shaza B Zaghlool et al. Clinical Epigenetics
- Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
- (2014) Martin J. Aryee et al. BIOINFORMATICS
- Accounting for Population Stratification in DNA Methylation Studies
- (2014) Richard T. Barfield et al. GENETIC EPIDEMIOLOGY
- The effect of genotype and in utero environment on interindividual variation in neonate DNA methylomes
- (2014) A. L. Teh et al. GENOME RESEARCH
- Integrative transcriptome meta-analysis reveals widespread sex-biased gene expression at the human fetal-maternal interface
- (2014) S. Buckberry et al. MOLECULAR HUMAN REPRODUCTION
- A data-driven approach to preprocessing Illumina 450K methylation array data
- (2013) Ruth Pidsley et al. BMC GENOMICS
- Gestational diabetes mellitus epigenetically affects genes predominantly involved in metabolic diseases
- (2013) Stephanie-May Ruchat et al. Epigenetics
- Eurasiaplex: A forensic SNP assay for differentiating European and South Asian ancestries
- (2013) C. Phillips et al. Forensic Science International-Genetics
- Widespread DNA hypomethylation at gene enhancer regions in placentas associated with early-onset pre-eclampsia
- (2013) J. D. Blair et al. MOLECULAR HUMAN REPRODUCTION
- Low-level processing of Illumina Infinium DNA Methylation BeadArrays
- (2013) Timothy J. Triche et al. NUCLEIC ACIDS RESEARCH
- Optimising sample collection for placental research
- (2013) G.J. Burton et al. PLACENTA
- DNA methylation age of human tissues and cell types
- (2013) Steve Horvath GENOME BIOLOGY
- A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data
- (2012) Andrew E. Teschendorff et al. BIOINFORMATICS
- DNA methylation arrays as surrogate measures of cell mixture distribution
- (2012) Eugene Houseman et al. BMC BIOINFORMATICS
- Factors underlying variable DNA methylation in a human community cohort
- (2012) L. L. Lam et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Complete pipeline for Infinium® Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation
- (2012) Nizar Touleimat et al. Epigenomics
- Population-specificity of human DNA methylation
- (2012) Hunter B Fraser et al. GENOME BIOLOGY
- SWAN: Subset-quantile Within Array Normalization for Illumina Infinium HumanMethylation450 BeadChips
- (2012) Jovana Maksimovic et al. GENOME BIOLOGY
- Evidence for widespread changes in promoter methylation profile in human placenta in response to increasing gestational age and environmental/stochastic factors
- (2011) Boris Novakovic et al. BMC GENOMICS
- In Utero Exposures, Infant Growth, and DNA Methylation of Repetitive Elements and Developmentally Related Genes in Human Placenta
- (2011) Charlotte S. Wilhelm-Benartzi et al. ENVIRONMENTAL HEALTH PERSPECTIVES
- Infant growth restriction is associated with distinct patterns of DNA methylation in human placentas
- (2011) Carolyn E. Banister et al. Epigenetics
- Research electronic data capture (REDCap)—A metadata-driven methodology and workflow process for providing translational research informatics support
- (2008) Paul A. Harris et al. JOURNAL OF BIOMEDICAL INFORMATICS
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