Long‐term exposure to elevated temperature leads to altered gene expression in a common bloom‐forming cyanobacterium

Two co‐dominant nitrogen‐fixing cyanobacteria demonstrate distinct acclimation and adaptation responses to cope with ocean warming

(2022) Ping‐Ping Qu et al.   Environmental Microbiology Reports

Daily Variations in pCO2 and fCO2 in a Subtropical Urbanizing Lake

(2022) Rongjie Yang et al.   Frontiers in Earth Science

Pelagic and ice‐associated microalgae under elevated light and pCO 2 : Contrasting physiological strategies in two Arctic diatoms

(2022) Klara K. E. Wolf et al.   LIMNOLOGY AND OCEANOGRAPHY

Adaptive Strategies and Evolutionary Responses of Microbial Organisms to Changing Oceans

(2022) Bovern Suchart Arromrak et al.   Frontiers in Marine Science

The combined impact of low temperatures and shifting phosphorus availability on the competitive ability of cyanobacteria

(2022) Charlotte L. Briddon et al.   Scientific Reports

Current Knowledge on Microviridin from Cyanobacteria

(2021) Samuel Cavalcante do Amaral et al.   Marine Drugs

Cyanobacteria and their secondary metabolites in three freshwater reservoirs in the United Kingdom

(2021) Daria Filatova et al.   Environmental Sciences Europe

Evolutionary Responses to Warming

(2021) Angela McGaughran et al.   TRENDS IN ECOLOGY & EVOLUTION

The genetic and ecophysiological diversity of Microcystis

(2021) Gregory J. Dick et al.   ENVIRONMENTAL MICROBIOLOGY

GTDB: an ongoing census of bacterial and archaeal diversity through a phylogenetically consistent, rank normalized and complete genome-based taxonomy

(2021) Donovan H Parks et al.   NUCLEIC ACIDS RESEARCH

The evolution of trait correlations constrains phenotypic adaptation to high CO 2 in a eukaryotic alga

(2021) Nathan G. Walworth et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

First Report on Microcystis as a Potential Microviridin Producer in Bulgarian Waterbodies

(2021) Blagoy Uzunov et al.   Toxins

Long‐term acclimation might enhance the growth and competitive ability of Microcystis aeruginosa in warm environments

(2021) Bogdan Drugă et al.   FRESHWATER BIOLOGY

Nonribosomal peptide synthetases and nonribosomal cyanopeptides synthesis in Microcystis: A comparative genomics study

(2021) Meng Chen et al.   Algal Research-Biomass Biofuels and Bioproducts

Single-colony sequencing reveals microbe-by-microbiome phylosymbiosis between the cyanobacterium Microcystis and its associated bacteria

(2021) Olga M. Pérez-Carrascal et al.   Microbiome

Evolutionary temperature compensation of carbon fixation in marine phytoplankton

(2020) Samuel Barton et al.   ECOLOGY LETTERS

Global lake thermal regions shift under climate change

(2020) Stephen C. Maberly et al.   Nature Communications

Defining Cyanobacterial Species: Diversity and Description Through Genomics

(2020) Anusuya Willis et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Adaptation of plasticity to projected maximum temperatures and across climatically defined bioregions

(2020) Jonathan Sandoval-Castillo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Complicated and Confusing Ecology of Microcystis Blooms

(2020) Steven W. Wilhelm et al.   mBio

VIBRANT: automated recovery, annotation and curation of microbial viruses, and evaluation of viral community function from genomic sequences

(2020) Kristopher Kieft et al.   Microbiome

Episodic Decrease in Temperature Increases mcy Gene Transcription and Cellular Microcystin in Continuous Cultures of Microcystis aeruginosa PCC 7806

(2020) Robbie M. Martin et al.   Frontiers in Microbiology

The impact of cation concentration on Microcystis (cyanobacteria) scum formation

(2019) Bogdan Drugă et al.   Scientific Reports

The coevolution of lifespan and reversible plasticity

(2019) Irja I. Ratikainen et al.   Nature Communications

Cyanobacterial peptides beyond microcystins – A review on co-occurrence, toxicity, and challenges for risk assessment

(2019) Elisabeth M.-L. Janssen   WATER RESEARCH

Future temperature and salinity do not exert selection pressure on cyst germination of a toxic phytoplankton species

(2019) Jacqueline Jerney et al.   Ecology and Evolution

Cyanobacterial bioactive metabolites—A review of their chemistry and biology

(2019) I-Shuo Huang et al.   HARMFUL ALGAE

Coherence of Microcystis species revealed through population genomics

(2019) Olga M. Pérez-Carrascal et al.   ISME Journal

SNP and indel frequencies at transcription start sites and at canonical and alternative translation initiation sites in the human genome

(2019) Kerstin Neininger et al.   PLoS One

OUP accepted manuscript

(2018)   BIOINFORMATICS

Temporal and spatial distribution of Microcystis biomass and genotype in bloom areas of Lake Taihu

(2018) Dong-Xing Guan et al.   CHEMOSPHERE

Competition for nutrients and light: testing advances in resource competition with a natural phytoplankton community

(2018) Amanda Burson et al.   ECOLOGY

The highly heterogeneous methylated genomes and diverse restriction-modification systems of bloom-forming Microcystis

(2018) Liang Zhao et al.   HARMFUL ALGAE

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Cyanobacterial blooms

(2018) Jef Huisman et al.   NATURE REVIEWS MICROBIOLOGY

Hot and toxic: Temperature regulates microcystin release from cyanobacteria

(2018) Jeremy T. Walls et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Warming Affects Growth Rates and Microcystin Production in Tropical Bloom-Forming Microcystis Strains

(2018) Trung Bui et al.   Toxins

Temperature responses of mutation rate and mutational spectrum in an Escherichia coli strain and the correlation with metabolic rate

(2018) Xiao-Lin Chu et al.   BMC EVOLUTIONARY BIOLOGY

Determination of the Role of Microcystis aeruginosa in Toxin Generation Based on Phosphoproteomic Profiles

(2018) Jiangqi Qu et al.   Toxins

Comparative genomics reveals the molecular determinants of rapid growth of the cyanobacterium Synechococcus elongatus UTEX 2973

(2018) Justin Ungerer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Competition between cyanobacteria and green algae at low versus elevated CO2: who will win, and why?

(2017) Xing Ji et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome sequences of lower Great Lakes Microcystis sp. reveal strain-specific genes that are present and expressed in western Lake Erie blooms

(2017) Kevin Anthony Meyer et al.   PLoS One

Insights into the Planktothrix genus: Genomic and metabolic comparison of benthic and planktic strains

(2017) Claire Pancrace et al.   Scientific Reports

A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp.

(2016) Matthew J. Harke et al.   HARMFUL ALGAE

Mitigating cyanobacterial harmful algal blooms in aquatic ecosystems impacted by climate change and anthropogenic nutrients

(2016) Hans W. Paerl et al.   HARMFUL ALGAE

Strains of the Harmful Cyanobacterium Microcystis aeruginosa Differ in Gene Expression and Activity of Inorganic Carbon Uptake Systems at Elevated CO2Levels

(2015) Giovanni Sandrini et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Daily transcriptome changes reveal the role of nitrogen in controlling microcystin synthesis and nutrient transport in the toxic cyanobacterium, Microcystis aeruginosa

(2015) Matthew J. Harke et al.   BMC GENOMICS

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Effects of temperature and nitrogen availability on the growth of invasive and native cyanobacteria

(2015) Mridul K. Thomas et al.   HYDROBIOLOGIA

Comparative genomics reveals diversified CRISPR-Cas systems of globally distributed Microcystis aeruginosa, a freshwater bloom-forming cyanobacterium

(2015) Chen Yang et al.   Frontiers in Microbiology

VirSorter: mining viral signal from microbial genomic data

(2015) Simon Roux et al.   PeerJ

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

Best practices for evaluating single nucleotide variant calling methods for microbial genomics

(2015) Nathan D. Olson et al.   Frontiers in Genetics

Screening and genetic characterization of thermo-tolerant Synechocystis sp. PCC6803 strains created by adaptive evolution

(2014) Ulrich M Tillich et al.   BMC BIOTECHNOLOGY

Characterisation of Cyanobacterial Bicarbonate Transporters in E. coli Shows that SbtA Homologs Are Functional in This Heterologous Expression System

(2014) Jiahui Du et al.   PLoS One

Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin of Atlantic codGadus morhua

(2013) Nina Overgaard Therkildsen et al.   Evolutionary Applications

Genetic diversity of inorganic carbon uptake systems causes variation in CO2 response of the cyanobacterium Microcystis

(2013) Giovanni Sandrini et al.   ISME Journal

Global Transcriptional Responses of the Toxic Cyanobacterium, Microcystis aeruginosa, to Nitrogen Stress, Phosphorus Stress, and Growth on Organic Matter

(2013) Matthew J. Harke et al.   PLoS One

Analysis of an Inactive Cyanobactin Biosynthetic Gene Cluster Leads to Discovery of New Natural Products from Strains of the Genus Microcystis

(2012) Niina Leikoski et al.   PLoS One

The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss

(2012) J. J. Morris et al.   mBio

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Genotype and SNP calling from next-generation sequencing data

(2011) Rasmus Nielsen et al.   NATURE REVIEWS GENETICS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Detection and expression of the phosphonate transporter genephnDin marine and freshwater picocyanobacteria

(2009) Irina N. Ilikchyan et al.   ENVIRONMENTAL MICROBIOLOGY

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Carbon dioxide supersaturation in Florida lakes

(2009) Jenney K. Lazzarino et al.   HYDROBIOLOGIA

Critical Evaluation of Two Primers Commonly Used for Amplification of Bacterial 16S rRNA Genes

(2008) J. A. Frank et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium

(2008) Lionel Frangeul et al.   BMC GENOMICS

CLIMATE: Blooms Like It Hot

(2008) H. W. Paerl et al.   SCIENCE