Environmental DNA of aquatic macrophytes: The potential for reconstructing past and present vegetation and environments

Internal phosphorus cycling in macrophyte-dominated eutrophic lakes and its implications

(2022) Lu Wang et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Sedimentary DNA identifies modern and past macrophyte diversity and its environmental drivers in high‐latitude and high‐elevation lakes in Siberia and China

(2022) Kathleen R. Stoof‐Leichsenring et al.   LIMNOLOGY AND OCEANOGRAPHY

Harnessing aquatic plant growth forms to apply European nutrient‐enrichment bioindicators to Canadian waters

(2022) Christopher D. Tyrrell et al.   Applications in Plant Sciences

Long-term fungus–plant covariation from multi-site sedimentary ancient DNA metabarcoding

(2022) Barbara von Hippel et al.   QUATERNARY SCIENCE REVIEWS

Postglacial species arrival and diversity buildup of northern ecosystems took millennia

(2022) Inger Greve Alsos et al.   Science Advances

Sediments nitrogen cycling influenced by submerged macrophytes growing in winter

(2021) Zhang Dan et al.   WATER SCIENCE AND TECHNOLOGY

Detection of Endangered Aquatic Plants in Rapid Streams Using Environmental DNA

(2021) Yuta Tsukamoto et al.   Frontiers in Ecology and Evolution

Ancient plant DNA reveals High Arctic greening during the Last Interglacial

(2021) Sarah E. Crump et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient sedimentary DNA shows rapid post-glacial colonisation of Iceland followed by relatively stable vegetation until the Norse settlement (Landnám) AD 870

(2021) Inger Greve Alsos et al.   QUATERNARY SCIENCE REVIEWS

Vegetation Changes in Southeastern Siberia During the Late Pleistocene and the Holocene

(2021) Jérémy Courtin et al.   Frontiers in Ecology and Evolution

Diversity Metrics Are Robust to Differences in Sampling Location and Depth for Environmental DNA of Plants in Small Temperate Lakes

(2021) Jennifer A. Drummond et al.   Frontiers in Environmental Science

Estimating aquatic plant diversity and distribution in rivers from Jingjinji region, China, using environmental DNA metabarcoding and a traditional survey method

(2021) Fenfen Ji et al.   ENVIRONMENTAL RESEARCH

Local habitat is a strong determinant of spatial and temporal patterns of macrophyte diversity and composition in boreal lakes

(2021) Richard K. Johnson et al.   FRESHWATER BIOLOGY

Rapid climate changes during the Lateglacial and the early Holocene as seen from plant community dynamics in the Polar Urals, Russia

(2021) Anne E. Bjune et al.   JOURNAL OF QUATERNARY SCIENCE

Tracking the transition to agriculture in Southern Europe through ancient DNA analysis of dental calculus

(2021) Claudio Ottoni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Exploring the Past Biosphere of Chew Bahir/Southern Ethiopia: Cross-Species Hybridization Capture of Ancient Sedimentary DNA from a Deep Drill Core

(2021) Johanna Krueger et al.   Frontiers in Earth Science

A global agenda for advancing freshwater biodiversity research

(2021) Alain Maasri et al.   ECOLOGY LETTERS

Anthropogenic and environmental drivers of vegetation change in southeastern Norway during the Holocene

(2021) A.T.M. ter Schure et al.   QUATERNARY SCIENCE REVIEWS

Significance of belowground production to the long-term carbon sequestration of intertidal seagrass beds

(2021) Yi-Fang Zou et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Plant Sedimentary Ancient DNA From Far East Russia Covering the Last 28,000 Years Reveals Different Assembly Rules in Cold and Warm Climates

(2021) Sichao Huang et al.   Frontiers in Ecology and Evolution

A Multi-Gene Region Targeted Capture Approach to Detect Plant DNA in Environmental Samples: A Case Study From Coastal Environments

(2021) Nicole R. Foster et al.   Frontiers in Ecology and Evolution

Ancient DNA analysis of food remains in human dental calculus from the Edo period, Japan

(2020) Rikai Sawafuji et al.   PLoS One

The Treasure Vault Can be Opened: Large-Scale Genome Skimming Works Well Using Herbarium and Silica Gel Dried Material

(2020) Inger Greve Alsos et al.   Plants-Basel

Functional traits in macrophyte studies: current trends and future research agenda

(2020) Alice Dalla Vecchia et al.   AQUATIC BOTANY

Last Glacial Maximum environmental conditions at Andøya, northern Norway; evidence for a northern ice-edge ecological “hotspot”

(2020) Inger G. Alsos et al.   QUATERNARY SCIENCE REVIEWS

Use of environmental DNA to detect the invasive aquatic plants Myriophyllum spicatum and Egeria densa in lakes

(2020) Lauren M. Kuehne et al.   Freshwater Science

Home for Marine Species: Seagrass Leaves as Vital Spawning Grounds and Food Source

(2020) Zhijian Jiang et al.   Frontiers in Marine Science

Optimizing extraction and targeted capture of ancient environmental DNA for reconstructing past environments using the PalaeoChip Arctic-1.0 bait-set

(2020) Tyler J. Murchie et al.   QUATERNARY RESEARCH

Potential Pollution Sources from Agricultural Activities on Tropical Forested Floodplain Wetlands Revealed by Soil eDNA

(2020) Maria Fernanda Adame et al.   Forests

Holocene Vegetation and Plant Diversity Changes in the North-Eastern Siberian Treeline Region From Pollen and Sedimentary Ancient DNA

(2020) Sisi Liu et al.   Frontiers in Ecology and Evolution

Ecological indicator and traits values for Swedish vascular plants

(2020) Torbjörn Tyler et al.   ECOLOGICAL INDICATORS

Detection of an invasive aquatic plant in natural water bodies using environmental DNA

(2019) Marc B. Anglès d’Auriac et al.   PLoS One

Environmental DNA reveals landscape mosaic of wetland plant communities

(2019) M.E. Shackleton et al.   Global Ecology and Conservation

Shotgun Environmental DNA, Pollen, and Macrofossil Analysis of Lateglacial Lake Sediments From Southern Sweden

(2019) Laura Parducci et al.   Frontiers in Ecology and Evolution

DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work

(2019) Hannah Weigand et al.   SCIENCE OF THE TOTAL ENVIRONMENT

World distribution, diversity and endemism of aquatic macrophytes

(2019) Kevin Murphy et al.   AQUATIC BOTANY

Arctic shrub colonization lagged peak postglacial warmth: Molecular evidence in lake sediment from Arctic Canada

(2019) Sarah E. Crump et al.   GLOBAL CHANGE BIOLOGY

New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality

(2019) C. Giguet-Covex et al.   Scientific Reports

Vegetation state changes in the course of shrub encroachment in an African savanna since about 1850 CE and their potential drivers

(2019) Ximena Tabares et al.   Ecology and Evolution

Macrophyte assessment in European lakes: Diverse approaches but convergent views of ‘good’ ecological status

(2018) Sandra Poikane et al.   ECOLOGICAL INDICATORS

Seasonal variation in environmental DNA detection in sediment and water samples

(2018) Andrew S. Buxton et al.   PLoS One

Plant DNA metabarcoding of lake sediments: How does it represent the contemporary vegetation

(2018) Inger Greve Alsos et al.   PLoS One

Responses of Aquatic Plants to Eutrophication in Rivers: A Revised Conceptual Model

(2018) Matthew T. O’Hare et al.   Frontiers in Plant Science

The Future of Freshwater Macrophytes in a Changing World: Dissolved Organic Carbon Quantity and Quality and Its Interactions With Macrophytes

(2018) Rosanne E. Reitsema et al.   Frontiers in Plant Science

Finding the pond through the weeds: eDNA reveals underestimated diversity of pondweeds

(2018) Maria L. Kuzmina et al.   Applications in Plant Sciences

From microbial eukaryotes to metazoan vertebrates: Wide spectrum paleo-diversity in sedimentary ancient DNA over the last ~14,500 years

(2018) Veljo Kisand et al.   Geobiology

Holocene floristic diversity and richness in northeast Norway revealed by sedimentary ancient DNA (sed aDNA) and pollen

(2018) Charlotte L. Clarke et al.   BOREAS

Ancient plant DNA in lake sediments

(2017) Laura Parducci et al.   NEW PHYTOLOGIST

Five thousand years of tropical lake sediment DNA records from Benin

(2017) L. Bremond et al.   QUATERNARY SCIENCE REVIEWS

Using Herbarium-Derived DNAs to Assemble a Large-Scale DNA Barcode Library for the Vascular Plants of Canada

(2017) Maria L. Kuzmina et al.   Applications in Plant Sciences

Substrate pH ranges of south Swedish bryophytes—Identifying critical pH values and richness patterns

(2016) Torbjörn Tyler et al.   FLORA

Postglacial viability and colonization in North America’s ice-free corridor

(2016) Mikkel W. Pedersen et al.   NATURE

Lake sedimentary DNA accurately records 20thCentury introductions of exotic conifers in Scotland

(2016) Per Sjögren et al.   NEW PHYTOLOGIST

DNA evidence of bowhead whale exploitation by Greenlandic Paleo-Inuit 4,000 years ago

(2016) Frederik Valeur Seersholm et al.   Nature Communications

In silico assessment of primers for eDNA studies using PrimerTree and application to characterize the biodiversity surrounding the Cuyahoga River

(2016) M. V. Cannon et al.   Scientific Reports

Use of environmental DNA to survey the distribution of an invasive submerged plant in ponds

(2016) Ayaka Fujiwara et al.   Freshwater Science

Use of environmental DNA to survey the distribution of an invasive submerged plant in ponds

(2016) Ayaka Fujiwara et al.   Freshwater Science

Evaluation of the Environmental DNA Method for Estimating Distribution and Biomass of Submerged Aquatic Plants

(2016) Saeko Matsuhashi et al.   PLoS One

Development of species-specific environmental DNA (eDNA) markers for invasive aquatic plants

(2015) Michelle Scriver et al.   AQUATIC BOTANY

Long-lasting modification of soil fungal diversity associated with the introduction of rabbits to a remote sub-Antarctic archipelago

(2015) Johan Pansu et al.   Biology Letters

The last Eurasian ice sheets - a chronological database and time-slice reconstruction, DATED-1

(2015) Anna L. C. Hughes et al.   BOREAS

Sedimentary ancient DNA from Lake Skartjørna, Svalbard: Assessing the resilience of arctic flora to Holocene climate change

(2015) Inger Greve Alsos et al.   HOLOCENE

Plant macrofossil evidence for an early onset of the Holocene summer thermal maximum in northernmost Europe

(2015) M. Väliranta et al.   Nature Communications

Fifty thousand years of Arctic vegetation and megafaunal diet

(2014) Eske Willerslev et al.   NATURE

Proxy comparison in ancient peat sediments: pollen, macrofossil and plant DNA

(2014) L. Parducci et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Use of Ancient Sedimentary DNA as a Novel Conservation Tool for High-Altitude Tropical Biodiversity

(2013) SANNE BOESSENKOOL et al.   CONSERVATION BIOLOGY

Molecular- and pollen-based vegetation analysis in lake sediments from central Scandinavia

(2013) Laura Parducci et al.   MOLECULAR ECOLOGY

Low-Canopy Seagrass Beds Still Provide Important Coastal Protection Services

(2013) Marjolijn J. A. Christianen et al.   PLoS One

A comparative study of ancient environmental DNA to pollen and macrofossils from lake sediments reveals taxonomic overlap and additional plant taxa

(2013) Mikkel Winther Pedersen et al.   QUATERNARY SCIENCE REVIEWS

Phylogenetic revision of Backhousieae (Myrtaceae): Neogene divergence, a revised circumscription of Backhousia and two new species

(2012) Mark G. Harrington et al.   AUSTRALIAN SYSTEMATIC BOTANY

Implications of Extreme Life Span in Clonal Organisms: Millenary Clones in Meadows of the Threatened Seagrass Posidonia oceanica

(2012) Sophie Arnaud-Haond et al.   PLoS One

Choosing and Using a Plant DNA Barcode

(2011) Peter M. Hollingsworth et al.   PLoS One