Environmental distances are more important than geographic distances for predicting earthworm gut bacterial community composition

Dynamics of bacterial community in the foregut and hindgut of earthworms with the nutrition supplied by kitchen waste during vermicomposting

(2023) Qi Zhao et al.   BIORESOURCE TECHNOLOGY

Carbendazim shapes microbiome and enhances resistome in the earthworm gut

(2022) Jiajin Song et al.   Microbiome

Composition, Structure and Diversity of Soil Bacterial Communities before, during and after Transit through the Gut of the Earthworm Aporrectodea caliginosa

(2022) Manuel Aira et al.   Microorganisms

Comparative Study on Bacterial Population Dynamics of Foregut, Midgut, and Hindgut Content of Perionyx excavatus (Perrier) Isolated from Eco-friendly, Non-hazardous Vermicompost

(2022) Sucharita Ghosh et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Food origin influences microbiota and stable isotope enrichment profiles of cold-adapted Collembola (Desoria ruseki)

(2022) Cao Hao et al.   Frontiers in Microbiology

Spatial patterns and ecological drivers of soil nematode β‐diversity in natural grasslands vary among vegetation types and trophic position

(2021) Dan Xiong et al.   JOURNAL OF ANIMAL ECOLOGY

Variations in bacterial taxonomic profiles and potential functions in response to the gut transit of earthworms (Eisenia fetida) feeding on cow manure

(2021) Ning Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Host habitat is the major determinant of the gut microbiome of fish

(2021) Pil Soo Kim et al.   Microbiome

Variations of earthworm gut bacterial community composition and metabolic functions in coastal upland soil along a 700-year reclamation chronosequence

(2021) Miao Zhang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

The bacterial community structures in response to the gut passage of earthworm (Eisenia fetida) feeding on cow dung and domestic sludge: Illumina high-throughput sequencing-based data analysis

(2020) Jian Hu et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Snow microhabitats provide food resources for winter-active Collembola

(2020) Cao Hao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil bacterial diversity correlates with precipitation and soil pH in long-term maize cropping systems

(2020) Wenjun Tan et al.   Scientific Reports

Soil properties changes earthworm diversity indices in different agro-ecosystem

(2020) Sharanpreet Singh et al.   BMC ECOLOGY

Co-evolution and Co-speciation of Host-Gut Bacteria Systems

(2020) Mathieu Groussin et al.   Cell Host & Microbe

The Effects of In Vivo Exposure to Copper Oxide Nanoparticles on the Gut Microbiome, Host Immunity, and Susceptibility to a Bacterial Infection in Earthworms

(2020) Elmer Swart et al.   Nanomaterials

Ecological role of earthworm intestinal bacteria in terrestrial environments: A review

(2020) Mingming Sun et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Environmental filtering drives distinct continental atlases of soil archaea between dryland and wetland agricultural ecosystems

(2019) Shuo Jiao et al.   Microbiome

Drivers of distance‐decay in bryophyte assemblages at multiple spatial scales: dispersal limitations or environmental control?

(2019) Cecilia Cacciatori et al.   JOURNAL OF VEGETATION SCIENCE

Metaphire guillelmi gut as hospitable micro-environment for the potential transmission of antibiotic resistance genes

(2019) Huizhen Chao et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Cold Resistance and the Distribution of Genetic Lineages of the Earthworm Eisenia nordenskioldi (Oligochaeta, Lumbricidae)

(2019) D. I. Berman et al.   BIOLOGY BULLETIN

Exposure to microplastics lowers arsenic accumulation and alters gut bacterial communities of earthworm Metaphire californica

(2019) Hong-Tao Wang et al.   ENVIRONMENTAL POLLUTION

Does Soil Contribute to the Human Gut Microbiome?

(2019) Winfried E.H. Blum et al.   Microorganisms

Balance between community assembly processes mediates species coexistence in agricultural soil microbiomes across eastern China

(2019) Shuo Jiao et al.   ISME Journal

Microbial communities of the house fly Musca domestica vary with geographical location and habitat

(2019) Rahel Park et al.   Microbiome

Significant Bacterial Distance-Decay Relationship in Continuous, Well-Connected Southern Ocean Surface Water

(2019) Zhi-Bin Wang et al.   MICROBIAL ECOLOGY

Phylogenetic and trophic determinants of gut microbiota in soil oribatid mites

(2018) Xin Gong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Diversity, structure and sources of bacterial communities in earthworm cocoons

(2018) Manuel Aira et al.   Scientific Reports

Worms Make Risky Choices Too: The effect of starvation on foraging in the common earthworm, Lumbricus terrestris

(2018) Pawandeep Sandhu et al.   CANADIAN JOURNAL OF ZOOLOGY

Environmental distances are more important than geographic distances when predicting spatial synchrony of zooplankton populations in a tropical reservoir

(2018) Vanessa G. Lopes et al.   FRESHWATER BIOLOGY

Dispersal mode and spatial extent influence distance-decay patterns in pond metacommunities

(2018) Irene Tornero et al.   PLoS One

Effects of long-term fertilization on the associated microbiota of soil collembolan

(2018) Jing Ding et al.   SOIL BIOLOGY & BIOCHEMISTRY

Environment and geographic distance differ in relative importance for determining fungal community of rhizosphere and bulk soil

(2017) Kaoping Zhang et al.   ENVIRONMENTAL MICROBIOLOGY

Phylogeography of Eisenia nordenskioldi nordenskioldi (Lumbricidae, Oligochaeta) from the north of Asia

(2017) S. V. Shekhovtsov et al.   POLAR BIOLOGY

A comparative study of gut microbiota profiles of earthworms fed in three different substrates

(2017) Dianfeng Liu et al.   SYMBIOSIS

Bacterial community dissimilarity between the surface and subsurface soils equals horizontal differences over several kilometers in the western Tibetan Plateau

(2016) Haiyan Chu et al.   ENVIRONMENTAL MICROBIOLOGY

Ecosystem Engineers in a Self-organized Soil

(2016) Patrick Lavelle et al.   SOIL SCIENCE

Vineyard soil bacterial diversity and composition revealed by 16S rRNA genes: Differentiation by geographic features

(2015) Kayla N. Burns et al.   SOIL BIOLOGY & BIOCHEMISTRY

Environmental heterogeneity as a universal driver of species richness across taxa, biomes and spatial scales

(2014) Anke Stein et al.   ECOLOGY LETTERS

Ranges and cold hardiness of two earthworm subspecies (Eisenia nordenskioldi, Lumbricidae, Oligochaeta)

(2013) D. I. Berman et al.   BIOLOGY BULLETIN

Patterns and Processes of Microbial Community Assembly

(2013) D. R. Nemergut et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Deviations from synchrony: spatio-temporal variability of zooplankton community dynamics in a large lake

(2012) Hanno Seebens et al.   JOURNAL OF PLANKTON RESEARCH

Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities

(2012) J. L. M. Rodrigues et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil pH drives the spatial distribution of bacterial communities along elevation on Changbai Mountain

(2012) Congcong Shen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil characteristics more strongly influence soil bacterial communities than land-use type

(2011) Eiko E. Kuramae et al.   FEMS MICROBIOLOGY ECOLOGY

Drivers of bacterial  -diversity depend on spatial scale

(2011) J. B. H. Martiny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Experimental tests of the bacterial distance–decay relationship

(2010) Thomas Bell   ISME Journal

Gut wall bacteria of earthworms: a natural selection process

(2009) Dwipendra Thakuria et al.   ISME Journal

A Feeding Induced Switch from a Variable to a Homogenous State of the Earthworm Gut Microbiota within a Host Population

(2009) Knut Rudi et al.   PLoS One

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

(2008) Christian L. Lauber et al.   SOIL BIOLOGY & BIOCHEMISTRY

To what extent does Tobler's 1st law of geography apply to macroecology? A case study using American palms (Arecaceae)

(2008) Stine Bjorholm et al.   BMC ECOLOGY